Contig 003794:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003N08Sequence240003794 (4)777008594 (5)ref|XP_009592648.1|327PREDICTED: uncharacterized protein DDB_G0274915 [Nicotiana tomentosiformis]
JMSF019G19Sequence244003794 (4)736008594 (5)ref|XP_009799920.1|299PREDICTED: uncharacterized protein DDB_G0274915 [Nicotiana sylvestris]
JMSF037B19Sequence721003794 (4)701008594 (5)ref|XP_009592648.1|262PREDICTED: uncharacterized protein DDB_G0274915 [Nicotiana tomentosiformis]
JMSF039C08Sequence693003794 (4)864008594 (5)ref|XP_009592648.1|363PREDICTED: uncharacterized protein DDB_G0274915 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF037B19+ A
                      ____________________________________________________________
consensus A
 
. : . : . : . : . : . :
JMSF037B19+ CAGTGATACAGTAGAGGNCACTGTACCTGAATTAGATGAAGATCCAGAGGATCCAGAGCC
                      ____________________________________________________________
consensus CAGTGATACAGTAGAGGNCACTGTACCTGAATTAGATGAAGATCCAGAGGATCCAGAGCC
 
. : . : . : . : . : . :
JMSF039C08+ AGACCCAAAAGGTGTAGAAGCTCCAAAAGAAGTTGCTCCAAACATTGGGGAACT
JMSF037B19+ CAAGGAAGACCCAAAAGGTGTAGAAGCTCCAAAAGAAGTTGCTCCAAACATTGGGGAACT
                      ____________________________________________________________
consensus CAAGGAAGACCCAAAAGGTGTAGAAGCTCCAAAAGAAGTTGCTCCAAACATTGGGGAACT
 
. : . : . : . : . : . :
JMSF039C08+ AACGGAGGTTGTGGTCGGGAGGGAAGAAGCAGATCCAAATAAATTTGTTGAAGATCCAGA
JMSF037B19+ AACGGAGGTTGTGGTCGGGAGGGAAGAAGCAGATCCAAATAAATTTGTTGAAGATCCAGA
                      ____________________________________________________________
consensus AACGGAGGTTGTGGTCGGGAGGGAAGAAGCAGATCCAAATAAATTTGTTGAAGATCCAGA
 
. : . : . : . : . : . :
JMSF039C08+ ACCCAAAGAAGCTCCAAATGCATTGGAAGTGGTAAACACGCCAGATCCAAATGGTGAAGT
JMSF037B19+ ACCCAAAGAAGCTCCAAATGCATTGGAAGTGGTAAACACGCCAGATCCAAATGGTGAAGT
                      ____________________________________________________________
consensus ACCCAAAGAAGCTCCAAATGCATTGGAAGTGGTAAACACGCCAGATCCAAATGGTGAAGT
 
. : . : . : . : . : . :
JMSF039C08+ AGAACCTGTAGTAGCAGATGAAGCTGCGGTGGCAGATGAACCAAAAGCGCCAGATCCAAA
JMSF037B19+ AGAACCTGTAGTAGCAGATGAAGCTGCGGTGGCAGATGAACCAAAAGCGCCAGATCCAAA
                      ____________________________________________________________
consensus AGAACCTGTAGTAGCAGATGAAGCTGCGGTGGCAGATGAACCAAAAGCGCCAGATCCAAA
 
. : . : . : . : . : . :
JMSF039C08+ TAAATTTGTTGATGCTCCGGAACTGGAATTAGCTCCAAATATGGATGGAGTGATACCCAC
JMSF037B19+ TAAATTTGTTGATGCTCCGGAACTGGAATTAGCTCCAAATATGGATGGAGTGATACCCAC
                      ____________________________________________________________
consensus TAAATTTGTTGATGCTCCGGAACTGGAATTAGCTCCAAATATGGATGGAGTGATACCCAC
 
. : . : . : . : . : . :
JMSF039C08+ ACTAGGTCCAAATGGCGAAGTAGTAGCAGTAGTAACAGATGAAGTTGTGGCAGCAGAAGA
JMSF037B19+ ACTAGGTCCAAATGGCGAAGTAGTAGCAGTAGTAACAGATGAAGTTGTGGCAGCAGAAGA
                      ____________________________________________________________
consensus ACTAGGTCCAAATGGCGAAGTAGTAGCAGTAGTAACAGATGAAGTTGTGGCAGCAGAAGA
 
. : . : . : . : . : . :
JMSF039C08+ GGCAGTGCCAAATCCGAAACTGGTGGATGAAGTACTGAAGCTAGGGTTTGACATAGAAAA
JMSF037B19+ GGCAGTGCCAAATCCGAAACTGGTGGATGAAGTACTGAAGCTAGGGTTTGACATAGAAAA
                      ____________________________________________________________
consensus GGCAGTGCCAAATCCGAAACTGGTGGATGAAGTACTGAAGCTAGGGTTTGACATAGAAAA
 
. : . : . : . : . : . :
JMSF039C08+ CCCAAATGGGGACGAGGATGAGGTGGTGGCAGCGGCACTAGGGGTTGAGGTGAAGGAGAA
JMSF019G19+ CACTAGGGGTTGAGGTGAAGGAGAA
JMSF003N08+ AAGGAGAA
JMSF037B19+ CCCAAATGGGGACGAGGATGAGGTGGTGGCAGCGGCACTAGGGGTTGAGGTGAAGGAGAA
                      ____________________________________________________________
consensus CCCAAATGGGGACGAGGATGAGGTGGTGGCAGCGGCACTAGGGGTTGAGGTGAAGGAGAA
 
. : . : . : . : . : . :
JMSF039C08+ AGGTGAGGAAGATGATGAAGAGTTGGAAAAAGAGAAGCCCGTGGCCATTGTA
JMSF019G19+ AGGTGAGGAAGATGATGAAGAGTTGGAAAAAGAGAAGCCCGTGGCCATTGTA
JMSF003N08+ AGGTGAGGAAGATGATGAAGAGTTGGAAAAAGAGAAGCCCGTGGCCATTGTA
JMSF037B19+ AGGTGAGGAAGATGATGAAGAGTTGGAAAAAGAGAAGCCCGTGGCCATTGTACTAGAACT
                      ____________________________________________________________
consensus AGGTGAGGAAGATGATGAAGAGTTGGAAAAAGAGAAGCCCGTGGCCATTGTACTAGAACT
 
. : . : . : . : . : . :
JMSF037B19+ AGAAGTCAGTACACTGCGACGACGCAGACGATGAGACTTCGACACCGATGGCCGACGGGA
                      ____________________________________________________________
consensus AGAAGTCAGTACACTGCGACGACGCAGACGATGAGACTTCGACACCGATGGCCGACGGGA
 
. : . : . : . : . : . :
JMSF037B19+ GCAGATGGGCGACGAACTGGACGACGGTTGACTGAGCGGCGATGGACCTCCGACGTCGCC
                      ____________________________________________________________
consensus GCAGATGGGCGACGAACTGGACGACGGTTGACTGAGCGGCGATGGACCTCCGACGTCGCC