Contig 003788:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN036I24Sequence626003788 (2)ref|XP_009594807.1|4e-48PREDICTED: mitogen-activated protein kinase 9-like [Nicotiana tomentosiformis]
JMSF036M16Sequence616003788 (2)ref|XP_009594807.1|6e-37PREDICTED: mitogen-activated protein kinase 9-like [Nicotiana tomentosiformis]760001273 (2)ref|XP_009791183.1|6e-05PREDICTED: mitogen-activated protein kinase 9-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFN036I24+                                              GGTTGCCAACATCATAGTCGCATCA
                      ____________________________________________________________
consensus                                                GGTTGCCAACATCATAGTCGCATCA
 
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JMFN036I24+           ATAGTACAACACAACATAAAAAGGTTTAAATTACCAGGAATTAGAAAGAAGTTAAAACTT
                      ____________________________________________________________
consensus             ATAGTACAACACAACATAAAAAGGTTTAAATTACCAGGAATTAGAAAGAAGTTAAAACTT
 
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JMFN036I24+           CCATCCATCCATCCATCCATATTGAAGAATCAAGCATACAAAGCTGTTAGCTCCTTTGGC
                      ____________________________________________________________
consensus             CCATCCATCCATCCATCCATATTGAAGAATCAAGCATACAAAGCTGTTAGCTCCTTTGGC
 
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JMFN036I24+           GATCTACCAATCCCATTGTCATATTGCTTGCAAGCAGCCAGCTCCTTTGACGATCTACTG
                      ____________________________________________________________
consensus             GATCTACCAATCCCATTGTCATATTGCTTGCAAGCAGCCAGCTCCTTTGACGATCTACTG
 
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JMFN036I24+           ATCTCATTTTGCTTGCAAGCTGTACCCTCGCTGTCCTGCCATATGGCACCGACACACTTG
JMSF036M16+                                    CCTCGCTGTCCTGCCATATGGCACCGACACACTTG
                      ____________________________________________________________
consensus             ATCTCATTTTGCTTGCAAGCTGTACCCTCGCTGTCCTGCCATATGGCACCGACACACTTG
 
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JMFN036I24+           GAAAAGCTAATGCTGGAACTTCTTAGTAAGCAACGCTCACTGTTGTTTGTTTTACAGTGA
JMSF036M16+           GAAAAGCTAATGCTGGAACTTCTTAGTAAGCAACGCTCACTGTTGTTTGTTTTACAGTGA
                      ____________________________________________________________
consensus             GAAAAGCTAATGCTGGAACTTCTTAGTAAGCAACGCTCACTGTTGTTTGTTTTACAGTGA
 
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JMFN036I24+           CCATTCTGAGAATGACCTATATCTGAATCAGCAGCAGCATCCGATTTCTTATTCTTCGGT
JMSF036M16+           CCATTCTGAGAATGACCTATATCTGAATCAGCAGCAGCATCCGATTTCTTATTCTTCGGT
                      ____________________________________________________________
consensus             CCATTCTGAGAATGACCTATATCTGAATCAGCAGCAGCATCCGATTTCTTATTCTTCGGT
 
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JMFN036I24+           GATGCACGGGGGCTAGGGAGACATCTGTGAGCAACTGCAGCCACAACATGCTGATCAAAA
JMSF036M16+           GATGCACGGGGGCTAGGGAGACATCTGTGAGCAACTGCAGCCACAACATGCTGATCAAAA
                      ____________________________________________________________
consensus             GATGCACGGGGGCTAGGGAGACATCTGTGAGCAACTGCAGCCACAACATGCTGATCAAAA
 
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JMFN036I24+           TCACCATCCTGATCCGTATCCTCATCTATGGAAACACAGACCCGCTCTCTAGGCAAGGAA
JMSF036M16+           TCACCATCCTGATCCGTATCCTCATCTATGGAAACACAGACCCGCTCTCTAGGCAAGGAA
                      ____________________________________________________________
consensus             TCACCATCCTGATCCGTATCCTCATCTATGGAAACACAGACCCGCTCTCTAGGCAAGGAA
 
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JMFN036I24+           GCATATCGCCTTGGAGCATTTCTGACACTTTTACCATAGTGATCCTCAAGATTGTCAAAC
JMSF036M16+           GCATATCGCCTTGGAGCATTTCTGACACTTTTACCATAGTGATCCTCAAGATTGTCAAAC
                      ____________________________________________________________
consensus             GCATATCGCCTTGGAGCATTTCTGACACTTTTACCATAGTGATCCTCAAGATTGTCAAAC
 
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JMFN036I24+           TGTTGCTTAAAACAATCAACTCCACT                                  
JMSF036M16+           TGTTGCTTAAAACAATCAACTCCACTATAATAACAAAGTAAAAATCCATGTGAGTGTAGG
                      ____________________________________________________________
consensus             TGTTGCTTAAAACAATCAACTCCACTATAATAACAAAGTAAAAATCCATGTGAGTGTAGG
 
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JMSF036M16+           ATGTGAATACAAACACACAGCACCAGCGAGTGAGTTGTGAAGTGAAATGCTAGTGAATGA
                      ____________________________________________________________
consensus             ATGTGAATACAAACACACAGCACCAGCGAGTGAGTTGTGAAGTGAAATGCTAGTGAATGA
 
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JMSF036M16+           CTGAAAACAATTGCATAATTAAAGGGGTATATTCAATCTCAAAATGCCATGATCGGATGC
                      ____________________________________________________________
consensus             CTGAAAACAATTGCATAATTAAAGGGGTATATTCAATCTCAAAATGCCATGATCGGATGC
 
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JMSF036M16+           TTAATAATATAAATTGTTGTGTGGTTTGCAGGCTATTACACAGGAGTGGAGTTTACCAGT
                      ____________________________________________________________
consensus             TTAATAATATAAATTGTTGTGTGGTTTGCAGGCTATTACACAGGAGTGGAGTTTACCAGT