| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF004P05 | Sequence | 323 | 003738 (9) | ref|XP_009784300.1| | 2e-24 | PREDICTED: uncharacterized protein LOC104232733 isoform X2 [Nicotiana sylvestri | 228 | 011029 (4) | |||
| JMSF024F02 | Sequence | 681 | 003738 (9) | ref|XP_009784300.1| | 3e-111 | PREDICTED: uncharacterized protein LOC104232733 isoform X2 [Nicotiana sylvestri | 774 | 003738 (9) | emb|CDP16692.1| | 5e-90 | unnamed protein product [Coffea canephora] |
| JMSF031D07 | Sequence | 674 | 003738 (9) | ref|XP_009784300.1| | 6e-109 | PREDICTED: uncharacterized protein LOC104232733 isoform X2 [Nicotiana sylvestri | 573 | 003738 (9) | emb|CDP16692.1| | 2e-50 | unnamed protein product [Coffea canephora] |
| JMSF045G12 | Sequence | 758 | 003738 (9) | ref|XP_009784300.1| | 4e-131 | PREDICTED: uncharacterized protein LOC104232733 isoform X2 [Nicotiana sylvestri | 806 | 003738 (9) | emb|CDP16692.1| | 4e-121 | unnamed protein product [Coffea canephora] |
| JMSF049H17 | Sequence | 536 | 003738 (9) | ref|XP_009784300.1| | 3e-83 | PREDICTED: uncharacterized protein LOC104232733 isoform X2 [Nicotiana sylvestri | 391 | 003738 (9) | ref|XP_006356019.1| | 3e-31 | PREDICTED: uncharacterized protein LOC102585296 isoform X1 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF031D07- TTACATTTGTGCTTTAACAATTTATTTCTACATACATACAAGTAA
rJMSF024F02- TTTGTGCTTTAACAATTTATTTCTACATACATACAAGTAA
rJMSF049H17- ACATACAAGTAA
rJMSF045G12- ATTTATTTCTACATACATACAAGTAA
____________________________________________________________
consensus TTACATTTGTGCTTTAACAATTTATTTCTACATACATACAAGTAA
. : . : . : . : . : . :
rJMSF031D07- TACTCTGCCATAAGCAGATGAATTTTCAATCCTATACCCTCCTATACAGTATACATACTG
rJMSF024F02- TACTCTGCCATAAGCAGATGAATTTTCAATCCTATACCCTCCTATACAGTATACATACTG
rJMSF049H17- TACTCGGNCATAAGCAGATGAATTTTNAATCCTATACCCTCCNATACGGTATNCATACTG
rJMSF045G12- TACTCTGCCATAAGCAGATGAATTTTCAATCCTATACCCTCCTATACAGTATACATACTG
____________________________________________________________
consensus TACTCTGCCATAAGCAGATGAATTTTCAATCCTATACCCTCCTATACAGTATACATACTG
. : . : . : . : . : . :
rJMSF031D07- CTTCCACTGACTTTTTCCTATGCTGCTTCAATCCATTAACTAGCAACCCAGGCCTAGGCC
rJMSF024F02- CTTCCACTGACTTTTTCCTATGCTGCTTCAATCCATTAACTAGCAACCCAGGCCTAGGCC
rJMSF049H17- CTTCCACTGACTTTTTCCTATGCTGCTTCAATCCATTNACNAGCAACCCAGGCCTAGGCC
rJMSF045G12- CTTCCACTGACTTTTTCCTATGCTGCTTCAATCCATTAACTAGCAACCCAGGCCTAGGCC
____________________________________________________________
consensus CTTCCACTGACTTTTTCCTATGCTGCTTCAATCCATTAACTAGCAACCCAGGCCTAGGCC
. : . : . : . : . : . :
rJMSF031D07- TGAAAATCTCGCAGCTCATTAGATTTCAATCTTGAATTCATAATTGAATTTGTTACACAG
rJMSF024F02- TGAAAATCTCGCAGCTCATTAGATTTCAATCTTGAATTCATAATTGAATTTGTTACACAG
rJMSF049H17- TGANAATCTCGCAGCTCANTANATTTCAATCTTGAATTCATAATTGAATTTGTTNCACAG
rJMSF045G12- TGAAAATCTCGCAGCTCATTAGATTTCAATCTTGAATTCATAATTGAATTTGTTACACAG
____________________________________________________________
consensus TGAAAATCTCGCAGCTCATTAGATTTCAATCTTGAATTCATAATTGAATTTGTTACACAG
. : . : . : . : . : . :
rJMSF031D07- AATTGACCCGCATTGCGCGTTTCACAAGATACTGGTACTCTTGACTCCTTGACCATTCAT
rJMSF024F02- AATTGACCCGCATTGCGCGTTTCACAAGATACTGGTACTCTTGACTCCTTGACCATTCAT
rJMSF049H17- AATTGACCCGCATTGCGCGTTTCACAAGATACTGGTNCTCTTGACTCCTTGACCATTCAT
rJMSF045G12- AATTGACCCGCATTGCGCGTTTCACAAGATACTGGTACTCTTGACTCCTTGACCATTCAT
____________________________________________________________
consensus AATTGACCCGCATTGCGCGTTTCACAAGATACTGGTACTCTTGACTCCTTGACCATTCAT
. : . : . : . : . : . :
rJMSF031D07- CTATCTCGCGTGCACGTAAAACAGGGAGAGGGTGTGAAAGTTGCCTTGTTTGAGCGTTTC
rJMSF024F02- CTATCTCGCGTGCACGTAAAACAGGGAGAGGGTGTGAAAGTTGCCTTGTTTGAGCGTTTC
rJMSF049H17- CTATCTCGCGTGCACGTAAAACAGGGAGAGGGTGTGAAAGTTGCCTTGTTNGAGCGTTTC
rJMSF045G12- CTATCTCGCGTGCACGTAAAACAGGGAGAGGGTGTGAAAGTTGCCTTGTTTGAGCGTTTC
____________________________________________________________
consensus CTATCTCGCGTGCACGTAAAACAGGGAGAGGGTGTGAAAGTTGCCTTGTTTGAGCGTTTC
. : . : . : . : . : . :
rJMSF031D07- TTATATACCATCCCACTGGGGTTGAAGAAGCCTGATCGTAAGAGCGAGCTTGTTCCAAGA
rJMSF024F02- TTATATACCATCCCACTGGGGTTGAAGAAGCCTGATCGTAAGAGCGAGCTTGTTCCAAGA
rJMSF049H17- TTATATACCATCCCACTGGGGTTGAAGAAGCCNGATCGTAAGAGCGAGCTTGTTCCAAGA
rJMSF045G12- TTATATACCATCCCACTGGGGTTGAAGAAGCCTGATCGTAAGAGCGAGCTTGTTCCAAGA
____________________________________________________________
consensus TTATATACCATCCCACTGGGGTTGAAGAAGCCTGATCGTAAGAGCGAGCTTGTTCCAAGA
. : . : . : . : . : . :
rJMSF031D07- AGGCATCCACATTCAGTTGATCAGCCAAAGATGGGGAGCCACCAGCAAGTTTCATTAGAA
rJMSF024F02- AGGCATCCACATTCAGTTGATCAGCCAAAGATGGGGAGCCACCAGCAAGTTTCATTAGAA
rJMSF049H17- AGGCATCCACATTCAGTTG
rJMSF045G12- AGGCATCCACATTCAGTTGATCAGCCAAAGATGGGGAGCCACCAGCAAGTTTCATTAGAA
____________________________________________________________
consensus AGGCATCCACATTCAGTTGATCAGCCAAAGATGGGGAGCCACCAGCAAGTTTCATTAGAA
. : . : . : . : . : . :
rJMSF031D07- CAGAGACAACCACCTCTTTGGGTCTTGTGCAACAAGAAGTGCTGCACGATCACAAGTGAG
rJMSF024F02- CAGAGACAACCACCTCTTTGGGTCTTGTGCAACAAGAAGTGCTGCACGATCACAAGTGAG
rJMSF045G12- CAGAGACAACCAC--CTTTGGGTCTTGTGCAACAAGAAGTGCTGCACGATCACAAGTGAG
JMSF045G12+ GGGTCTTGTGCAACAAGAAGTGCTGCACGATCACAAGTGAG
____________________________________________________________
consensus CAGAGACAACCACCTCTTTGGGTCTTGTGCAACAAGAAGTGCTGCACGATCACAAGTGAG
. : . : . : . : . : . :
rJMSF031D07- TTCCGCTGCACGAAGCCAGCGAAAAAGCTGTTCTTCCAATCGTTGAGC
rJMSF024F02- TTCCGCTGCACGAAGCCAGCGAAAAAGCTGTTCTTCCAATCGTTGAGCGATCAAACCACC
rJMSF045G12- TTCCGCTGCACGAAGCCAGCGAAAAAGCTGTTCTTCCAATCGTTGAGCGATCAAACCACC
JMSF024F02+ CAATCGTTGAGCGATCAAACCACC
JMSF049H17+ AGCCAGCGAAAAAGCTGTTCTTCCAATCGTTGAGCGATCAAACCACC
JMSF045G12+ TTCCGCTGCACGAAGCCAGCGAAAAAGCTGTTCTTCCAATCGTTGAGCGATCAAACCACC
JMSF031D07+ TGAGCGATCAAACCACC
____________________________________________________________
consensus TTCCGCTGCACGAAGCCAGCGAAAAAGCTGTTCTTCCAATCGTTGAGCGATCAAACCACC
. : . : . : . : . : . :
rJMSF024F02- AAGACCAGGTAAAGAATATGCCCCAAGAGTGAGAATATTTGCAACTGTCAGCCACACACC
rJMSF045G12- AAGACCAGGTAAAGAATATGCCCCAAGAGTGAGAATATTTGCAACTGTCAGCCACACACC
JMSF024F02+ AAGACCAGGTAAAGAATATGCCCCAAGAGTGAGAATATTTGCAACTGTCAGCCACACACC
JMSF049H17+ AAGACCAGGTAAAGAATATGCCCCAAGAGTGAGAATATTTGCAACTGTCAGCCACACACC
JMSF045G12+ AAGACCAGGTAAAGAATATGCCCCAAGAGTGAGAATATTTGCAACTGTCAGCCACACACC
JMSF031D07+ AAGACCAGGTAAAGAATATGCCCCAAGAGTGAGAATATTTGCAACTGTCAGCCACACACC
____________________________________________________________
consensus AAGACCAGGTAAAGAATATGCCCCAAGAGTGAGAATATTTGCAACTGTCAGCCACACACC
. : . : . : . : . : . :
rJMSF024F02- ATGATCGCACTTCAAAT-GACCTAACTCATGAGCCAAGACAGCCTGTAACTCCTTCCGTG
rJMSF045G12- ATGATCGCACTTCAAAT-GACCTAACTCATGAGCCAAGACAGCCTGTAACTCCTTCCGTG
JMSF024F02+ ATGATCGCACTTCAAAT-GACCTAACTCATGAGCCAAGACAGCCTGTAACTCCTTCCGTG
JMSF049H17+ ATGATCGCACTTCAAATGGACCTAACTCATGAGCCAAGACAGCCTGTAACTCCTTCCGTG
JMSF045G12+ ATGATCGCACTTCAAAT-GACCTAACTCATGAGCCAAGACAGCCTGTAACTCCTTCCGTG
JMSF031D07+ ATGATCGCACTTCAAAT-GACCTAACTCATGAGCCAAGACAGCCTGTAACTCCTTCCGTG
____________________________________________________________
consensus ATGATCGCACTTCAAAT-GACCTAACTCATGAGCCAAGACAGCCTGTAACTCCTTCCGTG
. : . : . : . : . : . :
rJMSF024F02- TGAGGAGCTCCACTAGACTTGTGTGGACAACGACAAAAGGCTTTTTGCCACTGATGGCCA
rJMSF045G12- TGAGGAGCTCCACTAGACTTGTGTGGACAACGACAAAAGGCTTTTTGCCACTGATGGCCA
JMSF024F02+ TGAGGAGCTCCACTAGACTTGTGTGGACAACGACAAAAGGCTTTTTGCCACTGATGGCCA
JMSF049H17+ TGAGGAGCTCCACTAGACTTGTGTGGACAACGACAAAAGGCTTTTTGCCACTGATGGCCA
JMSF045G12+ TGAGGAGCTCCACTAGACTTGTGTGGACAACGACAAAAGGCTTTTTGCCACTGATGGCCA
JMSF031D07+ TGAGGAGCTCCACTAGACTTGTGTGGACAACGACAAAAGGCTTTTTGCCACTGATGGCCA
____________________________________________________________
consensus TGAGGAGCTCCACTAGACTTGTGTGGACAACGACAAAAGGCTTTTTGCCACTGATGGCCA
. : . : . : . : . : . :
rJMSF024F02- GAGTATATGCATTTG
rJMSF045G12- GAGTATATGCATTTGGTACAGGGACTTTTGACGCACATACAAGTCAGGAGTCTCAATGCT
JMSF024F02+ GAGTATATGCATTTGGTACAGGA--CTTTGACGCACATACAAGTCAGGAGTCTCAATGCT
JMSF049H17+ GAGTATATGCATTTGGTACAGGA--CTTTGACGCACATNCAAGTCAGGAGTCTCAATGCT
JMSF045G12+ GAGTATATGCATTTGGTACAGGA--CTTTGACGCACATACAAGTCAGGAGTCTCAATGCT
JMSF031D07+ GAGTATATGCATTTGGTACAGGA--CTTTGACGCACATACAAGTCAGGAGTCTCAATGCT
____________________________________________________________
consensus GAGTATATGCATTTGGTACAGGA--CTTTGACGCACATACAAGTCAGGAGTCTCAATGCT
. : . : . : . : . : . :
rJMSF045G12- TAG
JMSF024F02+ TAGTATTTTAGCAGCCTCAACCATTAATTGATGAAGTTCAGGGAGCTGATTTTCAGAAAC
JMSF049H17+ TAGTATTTTAGCAGCCTCAACCATTAATTGATGAAGTTCAGGGAGCTGATTTTCAGAAAC
JMSF045G12+ TAGTATTTTAGCAGCCTCAACCATTAATTGATGAAGTTCAGGGAGCTGATTTTCAGAAAC
JMSF031D07+ TAGTATTTTAGCAGCCTCAACCATTAATTGATGAAGTTCAGGGAGCTGATTTTCAGAAAC
____________________________________________________________
consensus TAGTATTTTAGCAGCCTCAACCATTAATTGATGAAGTTCAGGGAGCTGATTTTCAGAAAC
. : . : . : . : . : . :
JMSF024F02+ AAGAAGTGATGTTCCTATGTTCTCCAGAAACATGACCTGCTCTGACACAGTTCCCAATAA
JMSF049H17+ AAGAAGTGATGTTCCTATGTTCTCCAGAAACATGACCTGCTNTGACACAGTTCCCAATAA
JMSF045G12+ AAGAAGTGATGTTCCTATGTTCTCCAGAAACATGACCTGCTCTGACACAGTTCCCAATAA
JMSF004P05+ TCTGACACAGTTCCCAATAA
JMSF031D07+ AAGAAGTGATGTTCCTATGTTCTCCAGAAACATGACCTGCTCTGACACAGTTCCCAATAA
____________________________________________________________
consensus AAGAAGTGATGTTCCTATGTTCTCCAGAAACATGACCTGCTCTGACACAGTTCCCAATAA
. : . : . : . : . : . :
JMSF024F02+ AGCTTTGCCGACCTCATTCAAACCTGGAATTGCTCTCAAAAGCAGTGTATTCTGTCTATC
JMSF049H17+ AGCTTTGCCGACCTCATTCAAACCNGGAATTGCTCTCAAAAGCAGTGTATTCTGTCTATC
JMSF045G12+ AGCTTTGCCGACCTCATTCAAACCTGGAATTGCTCTCAAAAGCAGTGTATTCTGTCTATC
JMSF004P05+ AGCTTTGCCGACCTCATTCAAACCTGGAATTGCTCTCAAAAGCAGTGTATTCTGTCTATC
JMSF031D07+ AGCTTTGCCGACCTCATTCAAACCTGGAATTGCTCTCAAAAGCAGTGTATTCTGTCTATC
____________________________________________________________
consensus AGCTTTGCCGACCTCATTCAAACCTGGAATTGCTCTCAAAAGCAGTGTATTCTGTCTATC
. : . : . : . : . : . :
JMSF024F02+ AAGAGGATGCCTAAAATCATCGGCGTCTAGATCGCGAAACACGACTGAGGCTGCTCGGCA
JMSF049H17+ AAGAGGATGCCTAAAATCATCGGCGTNTAGATCGCGAAACNCGACTGAGGCTGCTCGGCA
JMSF045G12+ AAGAGGATGCCTAAAATCATCGGCGTCTAGATCGCGAAACACGACTGAGGCTGCTCGGCA
JMSF004P05+ AAGAGGATGCCTAAAATCATCGGCGTCTAGATCGCGAAACACGACTGAGGCTGCTCGGCA
JMSF031D07+ AAGAGGATGCCTAAAATCATCGGCGTCTAGATCGCGAAACACGACTGAGGCTGCTCGGCA
____________________________________________________________
consensus AAGAGGATGCCTAAAATCATCGGCGTCTAGATCGCGAAACACGACTGAGGCTGCTCGGCA
. : . : . : . : . : . :
JMSF024F02+ AACAAAAGCCCTTCTTAACGGATGAGACTTTGGCCGCGCGATTCCAAAGGAAAGCGAAGG
JMSF049H17+ AACAAAAGC
JMSF045G12+ AACAAAAGCCCTTCTTAACGGATGAGACTTTGGCCGCGCGATTCCAAAGGAAAGCGAAGG
JMSF004P05+ AACAAAAGCCCTTCTTAACGGATGAGACTTTGGCCGCGCGATTCCAAAGGAAAGCGAAGG
JMSF031D07+ AACAAAAGCCCTTCTTAACGGATGAGACTTTGGCCGCGCGATTCCAAAGGAAAGCGAAGG
____________________________________________________________
consensus AACAAAAGCCCTTCTTAACGGATGAGACTTTGGCCGCGCGATTCCAAAGGAAAGCGAAGG
. : . : . : . : . : . :
JMSF024F02+ GACAGCGGAGTTGCTGGCTTTGGCGCCAAAGTAAACAGCGAGAGGCGGCGATGCTTTGGG
JMSF045G12+ GACAGCGGAGTTGCTGGCTTTGGCGCCAAAGTAAACAGCGAGAGGCGGCGATGCTTTGGG
JMSF004P05+ GACAGCGGAGTTGCTGGCTTTGGCGCCAAAGTAAACAGCGAGAGGCGGCGATGCTTTGGG
JMSF031D07+ GACAGCGGAGTTGCTGGCTTTGGCGCCAAAGTAAACAGCGAGAGGCGGCGATGCTTTGGG
____________________________________________________________
consensus GACAGCGGAGTTGCTGGCTTTGGCGCCAAAGTAAACAGCGAGAGGCGGCGATGCTTTGGG
. : . : . : . : . : . :
JMSF024F02+ CGGCGGGAAAGTGGTAGAATAAAGGGCAACGGAAGCCATGGAAAGATGGATAGAATCT
JMSF045G12+ CGGCGGGAAAGTGGTAGAATAAAGGGCAACGGAAGCCATGGAAAGATGGATAGAATCT
JMSF004P05+ CGGCGGGAAAGTGGTAGAATAAAGGGCAACGGAAGCCATGGAAAGATGGATAGAATCT
JMSF031D07+ CGGCGGGAAAGTGGTAGAATAAAGGGCAACGGAAGCCATGGAAAGATGGATAGAATCTTC
____________________________________________________________
consensus CGGCGGGAAAGTGGTAGAATAAAGGGCAACGGAAGCCATGGAAAGATGGATAGAATCTTC