Contig 003732:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015D16Sequence510003732 (2)752013923 (3)ref|XP_002529368.1|7e-107serine-threonine kinase receptor-associated protein, putative [Ricinus communis
JMSF030L11Sequence625003732 (2)ref|XP_010688097.1|1e-11PREDICTED: serine-threonine kinase receptor-associated protein-like [Beta vulga751013923 (3)ref|XP_002529368.1|7e-107serine-threonine kinase receptor-associated protein, putative [Ricinus communis

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF030L11+ CTTTGCTGGCACTGATGAGGAAAAAT
                      ____________________________________________________________
consensus CTTTGCTGGCACTGATGAGGAAAAAT
 
. : . : . : . : . : . :
JMSF030L11+ CCNTCAGGAGTGATGGGGCTGTAGAACAAATCAACAACCGGCCGGGAATGCCCGTGGCAA
                      ____________________________________________________________
consensus CCNTCAGGAGTGATGGGGCTGTAGAACAAATCAACAACCGGCCGGGAATGCCCGTGGCAA
 
. : . : . : . : . : . :
JMSF015D16+ ATCAANCAATATTCCTAATTGCCCCCAGAATAT
JMSF030L11+ ACAAGCGGAGCGGCAACCTTNTTATCCATCAAACAATATTCCTAATTGCCCCCAGAATAT
                      ____________________________________________________________
consensus ACAAGCGGAGCGGCAACCTTNTTATCCATCAAACAATATTCCTAATTGCCCCCAGAATAT
 
. : . : . : . : . : . :
JMSF015D16+ AAATATGCT-AAAAAAAAATACTTTCTTTCCTCTTT--ATCAAATATGCTATAAATAAGA
JMSF030L11+ AAATATGCTAAAAAAAAAATACTTTCTTTCCTCTTTCGATCAAATATGCTATAAATAAGA
                      ____________________________________________________________
consensus AAATATGCTAAAAAAAAAATACTTTCTTTCCTCTTTCGATCAAATATGCTATAAATAAGA
 
. : . : . : . : . : . :
JMSF015D16+ TACTAGCAAAATCAAAATCAACGCGGCCAAGTCCCAGATCCGAATTTCATAAAACAAGGA
JMSF030L11+ TACTAGCAAAATCAAAATCAACGCGGCCAAGTCCCAGATCCGAATTTCATAAAACAAGGA
                      ____________________________________________________________
consensus TACTAGCAAAATCAAAATCAACGCGGCCAAGTCCCAGATCCGAATTTCATAAAACAAGGA
 
. : . : . : . : . : . :
JMSF015D16+ ACGGCAAAAACAGCACCAACTGACAATTGAACAAAAAATACGCACAATTGCCTGCACAAA
JMSF030L11+ ACGGCAAAAACAGCACCAACTGACAATTGAACAAAAAATACGCACAATTGCCTGCACAAA
                      ____________________________________________________________
consensus ACGGCAAAAACAGCACCAACTGACAATTGAACAAAAAATACGCACAATTGCCTGCACAAA
 
. : . : . : . : . : . :
JMSF015D16+ ATCCAAACTTTATATGCTGATTTTTGTTCTTTGATGTGTTTATCCACTGTATAGAAGAAA
JMSF030L11+ ATCCAAACTTTATATGCTGATTTTTGTTCTTTGATGTGTTTATCCACTGTATAGAAGAAA
                      ____________________________________________________________
consensus ATCCAAACTTTATATGCTGATTTTTGTTCTTTGATGTGTTTATCCACTGTATAGAAGAAA
 
. : . : . : . : . : . :
JMSF015D16+ ATTGCAAATTAAAATGTAAAATTTTCTACAGATCAGATATAGATAAGGAAATGGATATGT
JMSF030L11+ ATTGCAAATTAAAATGTAAAATTTTCTACAGATCAGATATAGATAAGGAAATGGATATGT
                      ____________________________________________________________
consensus ATTGCAAATTAAAATGTAAAATTTTCTACAGATCAGATATAGATAAGGAAATGGATATGT
 
. : . : . : . : . : . :
JMSF015D16+ GTATTAGGGAGATTGGCGCGACAATCAACAAGGTGGGAAACCCTAAATTGGGATTCGATC
JMSF030L11+ GTATTAGGGAGATTGGCGCGACAATCAACAAGGTGGGAAACCCTAAATTGGGATTCGATC
                      ____________________________________________________________
consensus GTATTAGGGAGATTGGCGCGACAATCAACAAGGTGGGAAACCCTAAATTGGGATTCGATC
 
. : . : . : . : . : . :
JMSF015D16+ GGTTTGAGTTCTGAGTGAATTCACACCTCCAACCCTAGAAGATTGATAGATCAGAGAGAA
JMSF030L11+ GGTTTGAGTTCTGAGTGAATTCACACCTCCAACCCTAGAAGATTGATAGATCAGAGAGAA
                      ____________________________________________________________
consensus GGTTTGAGTTCTGAGTGAATTCACACCTCCAACCCTAGAAGATTGATAGATCAGAGAGAA
 
. : . : . : . : . : . :
JMSF015D16+ AAAAACAAAAGAAAAAAAATATAGTAATATACAACTACACTACAGGGCTGGCTGGG
JMSF030L11+ AAAAACAAAAG-AAAAAAATATAGTAATATACAACTACACTACAGGGCTGGCTGGGCGCC
                      ____________________________________________________________
consensus AAAAACAAAAGAAAAAAAATATAGTAATATACAACTACACTACAGGGCTGGCTGGGCGCC