| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008O12 | Sequence | 197 | 003728 (18) | 515 | 003728 (18) | ref|XP_009763316.1| | 4e-10 | PREDICTED: arabinogalactan peptide 22-like [Nicotiana sylvestris] | |||
| JMFF013N09 | Sequence | 189 | 003728 (18) | 564 | 003728 (18) | ref|XP_009763316.1| | 6e-10 | PREDICTED: arabinogalactan peptide 22-like [Nicotiana sylvestris] | |||
| JMFF015N02 | Sequence | 581 | 003728 (18) | ref|XP_009763316.1| | 3e-14 | PREDICTED: arabinogalactan peptide 22-like [Nicotiana sylvestris] | 553 | 003728 (18) | ref|XP_009763316.1| | 7e-10 | PREDICTED: arabinogalactan peptide 22-like [Nicotiana sylvestris] |
| JMFF019O09 | Sequence | 182 | 003728 (18) | 448 | 003728 (18) | ref|XP_009763316.1| | 9e-10 | PREDICTED: arabinogalactan peptide 22-like [Nicotiana sylvestris] | |||
| JMFF026B11 | Sequence | 188 | 003728 (18) | 433 | 003728 (18) | ref|XP_009763316.1| | 3e-10 | PREDICTED: arabinogalactan peptide 22-like [Nicotiana sylvestris] | |||
| JMFF033B08 | Sequence | 182 | 003728 (18) | 434 | 003728 (18) | ref|XP_009763316.1| | 2e-12 | PREDICTED: arabinogalactan peptide 22-like [Nicotiana sylvestris] | |||
| JMFF050A02 | Sequence | 594 | 003728 (18) | ref|XP_009763316.1| | 7e-09 | PREDICTED: arabinogalactan peptide 22-like [Nicotiana sylvestris] | 584 | 003728 (18) | ref|XP_009763316.1| | 7e-09 | PREDICTED: arabinogalactan peptide 22-like [Nicotiana sylvestris] |
| JMFN003I13 | Sequence | 571 | 003728 (18) | ref|XP_009763316.1| | 2e-09 | PREDICTED: arabinogalactan peptide 22-like [Nicotiana sylvestris] | |||||
| JMFN028A02 | Sequence | 496 | 003728 (18) | ref|XP_009763316.1| | 7e-10 | PREDICTED: arabinogalactan peptide 22-like [Nicotiana sylvestris] | |||||
| JMSF030E16 | Sequence | 225 | 003728 (18) | 557 | 003728 (18) | ref|XP_009763316.1| | 2e-09 | PREDICTED: arabinogalactan peptide 22-like [Nicotiana sylvestris] | |||
This contig is upended
. : . : . : . : . : . :
rJMFF050A02- GAAACGACTTAAGATTAAGCAAAAGGGCATACAGATTCCCATAGCAAGAACC
rJMFF019O09- AGCAAAAGGGCATACAGATTCCCATAGCAAGAACC
rJMFF026B11- TACAGATTCCCATAGCAAGAACC
rJMFF033B08- TAGCAAGAACC
JMFN028A02+ AAGCAAAAGGGCATACAGATTCCCATAGCAAGAACC
JMFN003I13+ GAAACGACTTAAGATTAAGCAAAAGGGCATACAGATTCCCATAGCAAGAACC
JMFF015N02+ TTAAGCAAAAGGGCATACAGATTCCCATAGCAAGAACC
rJMFF015N02- ATTCCCATAGCAAGAACC
rJMSF030E16- GATTCCCATAGCAAGAACC
rJMFF013N09- AGAACC
JMFF050A02+ GAAGGAAACGACTTAAGATTAAGCAAAAGGGCATACAGATTCCCATAGCAAGAACC
____________________________________________________________
consensus GAAGGAAACGACTTAAGATTAAGCAAAAGGGCATACAGATTCCCATAGCAAGAACC
. : . : . : . : . : . :
rJMFF050A02- AAATTTAGAGTCTACAAGACTTATTGGAAATAGAAATGCAACAAAAACATATCCTCAAAG
rJMFF019O09- AAATTTAGAGTCTACAAGACTTATTGGAAATAGAAATGCAACAAAAACATATCCTCAAAG
rJMFF026B11- AAATTTAGAGTCTACAAGACTTATTGGAAATAGAAATGCAACAAAAACATATCCTCAAAG
rJMFF033B08- NAATTTANAGTCTACAANACTTATTGGAAATAGANATGCAACAAAAACATATCCTCAAAG
JMFN028A02+ AAATTTAGAGTCTACAAGACTTATTGGAAATAGAAATGCAACAAAAACATATCCTCAAAG
JMFN003I13+ AAATTTAGAGTCTACAAGACTTATTGGAAATAGAAATGCAACAAAAACATATCCTCAAAG
JMFF015N02+ AAATTTAGAGTNTACAAGACTTATTGGAAATAGAAATGCAACAAAAACATATCCTCAAAG
rJMFF008O12- TATTGGAAATAGAAATGCAACAAAAACATATCCTCAAAG
rJMFF015N02- AAATTTAGAGTCTACAAGACTTATTGGAAATAGAAATGCAACAAAAACATATCCTCAAAG
rJMSF030E16- AAATTTAGAGTCTACAAGACTTATTGGAAATAGAAATGCAACAAAAACATATCCTCAAAG
rJMFF013N09- AAATTTAGAGTCTACAAGACTTATTGGAAATAGAAATGCAACAAAAACATATCCTCAAAG
JMFF050A02+ AAATTTAGAGTCTACAAGACTTATTGGAAATAGAAATGCAACAAAAACATATCCTCAAAG
____________________________________________________________
consensus AAATTTAGAGTCTACAAGACTTATTGGAAATAGAAATGCAACAAAAACATATCCTCAAAG
. : . : . : . : . : . :
rJMFF050A02- TTTCAAACTCTAAATAC-AAAAAACCAGGAATCATAGTCTGTCCTACAACCTCAATTCTT
rJMFF019O09- TTTCAAACTCTAAATAC-AAAAAACCAGGAATCATAGTCTGTCCTACAACCTCAATTCTT
rJMFF026B11- TTTCAAACTCTAAATAC-AAAAAACCAGGAATCATAGTCTGTCCTACAACCTCAATTCTT
rJMFF033B08- TTTCANACTCTAAATAC-AAAAAACCAGGAATCATANTCTGTCCTACNACCTCAATTCTT
JMFN028A02+ TTTCAAACTCTAAATAC-AAAAAACCAGGAATCATAGTCTGTCCTACAACCTCAATTCTT
JMFN003I13+ TTTCAAACTCTAAATAC-AAAAAACCAGGAATCATAGTCTGTCCTACAACCTCAATTCTT
JMFF015N02+ TTTCAAACTNTAAATAC-AAAAAACCAGGAATCATAGTNTGTCCTACAACCTCAATTNTT
rJMFF008O12- TTTCAAACTCTAAATACAAAAAAACCAGGAATCATAGTCTGTCCTACAACCTCAATTCTT
rJMFF015N02- TTTCAAACTCTAAATAC-AAAAAACCAGGAATCATAGTCTGTCCTACAACCTCAATTCTT
rJMSF030E16- TTTCAAACTCTAAATAC-AAAAAACCAGGAATCATAGTCTGTCCTACAACCTCAATTCTT
rJMFF013N09- TTTCAAACTCTAAATAC-AAAAAACCAGGAATCATAGTCTGTCCTACAACCTCAATTCTT
JMFF050A02+ TTTCAAACTCTAAATAC-AAAAAACCAGGAATCATAGTCTGTCCTACAACCTCAATTCTT
____________________________________________________________
consensus TTTCAAACTCTAAATAC-AAAAAACCAGGAATCATAGTCTGTCCTACAACCTCAATTCTT
. : . : . : . : . : . :
rJMFF050A02- ATTTCAGACCTTCACAGGGACATCCGCTGTGTGAATGATGTATGTCAGCACTAACGCCAA
rJMFF019O09- ATTTCAGACCTTCACAGGGACATCCGCTGTGTGAATGATGTATGTCAGCACTAACGCCAA
rJMFF026B11- ATTTCAGACCTTCACAGGGACATCCGCTGTGTGAATGATGTATGTCAGCACTAACGCCAA
rJMFF033B08- ATTTCANACCTTCACAGGGACATCCGCTGTGTGAATGATGTATGTCANCACTAACGCCAA
JMFN028A02+ ATTTCAGACCTTCACAGGGACATCCGCTGTGTGAATGATGTATGTCAGCACTAACGCCAA
JMFN003I13+ ATTTCAGACCTTCACAGGGACATCCGCTGTGTGAATGATGTATGTCAGCACTAACGCCAA
JMFF015N02+ ATTTCAGACCTTCNCAGGGACATCCGCTGTGTGAATGATGTATGTCAGCNCTAACGCCAA
rJMFF008O12- ATTTCAGACCTTCACAGGGACATCCGCTGTGTGAATGATGTATGTCAGCACTAACGCCAA
rJMFF015N02- ATTTCAGACCTTCACAGGGACATCCGCTGTGTGAATGATGTATGTCAGCACTAACGCCAA
rJMSF030E16- ATTTCAGACCTTCACAGGGACATCCGCTGTGTGAATGATGTATGTCAGCACTAACGCCAA
rJMFF013N09- ATTTCAGACCTTCACAGGGACATCCGCTGTGTGAATGATGTATGTCAGCACTAACGCCAA
JMFF050A02+ ATTTCAGACCTTCACAGGGACATCCGCTGTGTGAATGATGTATGTCAGCACTAACGCCAA
____________________________________________________________
consensus ATTTCAGACCTTCACAGGGACATCCGCTGTGTGAATGATGTATGTCAGCACTAACGCCAA
. : . : . : . : . : . :
rJMFF050A02- CAACATCAAAACGCACGCAATCCCTTGGTCAATTGTTGTCCCATCGCTGGCAGGGGCGGG
rJMFF019O09- CAACATCAAAACGTACGCAATCCCTTGGTCAATTGTTGTCCCATCGCTGGCAGGGGCGGG
rJMFF026B11- CAACATCAAAACGTACGCAATCCCTTGGTCAATTGTTGTCCCATCGCTGGCAGGGGCGGG
rJMFF033B08- CAACATCAAAACGTACGCAATCCCTTGGTCAATTGTTGTCCGATCGCTGGCAGGGGCGGG
JMFN028A02+ CAACATCAAAACGTACGCAATCCCTTGGTCAATTGTTGTCCCATCGCTGGCAGGGGCGGG
JMFN003I13+ CAACATCAAAACGTACGCAATCCCTTGGTCAATTGTTGTCCCATCGCTGGCAGGGGCGGG
JMFF015N02+ CAACATCAAAACGTACGCAATCCCTTGGTCAATTGTTGTCCCATCGCTGGCAGGGGCGGG
rJMFF008O12- CAACATCAAAACGTACGCAATCCCTTGGTCAATTGTTGTCCCATCGCTGGCAGGGGCGGG
rJMFF015N02- CAACATCAAAACGTACGCAATCCCTTGGTCAATTGTTGTCCCATCGCTGGCAGGGGCGGG
rJMSF030E16- CAACATCAAAACGTACGCAATCCCTTGGTCAATTGTTGTCCCATCGCTGGCAGGGGCGGG
rJMFF013N09- CAACATCAAAACGTACGCAATCCCTTGGTCAATTGTTGTCCCATCGCTGGCAGGGGCGGG
JMFF050A02+ CAACATCAAAACGCACGCAATCCCTTGGTCAATTGTTGTCCCATCGCTGGCAGGGGCGGG
____________________________________________________________
consensus CAACATCAAAACGTACGCAATCCCTTGGTCAATTGTTGTCCCATCGCTGGCAGGGGCGGG
. : . : . : . : . : . :
rJMFF050A02- AGCCGGAGCCGAATCTTGACCCTGGGCAACAGGCAAAATGGTGGTAAAAACAAGAGAAAA
rJMFF019O09- AGCCGGAGCCGAATCTTGACCCTGGGCAACAGGCAAAATGGTGGTAAAAACAAGAGAAAA
rJMFF026B11- AGCCGGAGCCGAATCTTGACCCTGGGCAACAGGCAAAATGGTGGTAAAAACAAGAGAAAA
rJMFF033B08- AGCCGGAGCCNAATCTTGACCCTGGGCAACAGGCAANATGGTGGTAAAAACAANAGAANA
JMFN028A02+ AGCCGGAGCCGAATCTTGACCCTGGGCAACAGGCAAAATGGTGGTAAAAACAAGAGAAAA
JMFN003I13+ AGCCGGAGCCGAATCTTGACCCTGGGCAACAGGCAAAATGGTGGTAAAAACAAGAGAAAA
JMFF015N02+ AGCCGGAGCCGAATNTTGACCCTGGGCAACAGGCAAAATGGTGGTAAAAACAAGAGAAAA
rJMFF008O12- AGCCGGAGCCGAATCTTGACCCTGGGCAACAGGCAAAATGGTGGTAAAAACAAGAGAAAA
rJMFF015N02- AGCCGGAGCCGAATCTTGACCCTGGGCAACAGGCAAAATGGTGGTAAAAACAAGAGAAAA
rJMSF030E16- AGCCGGAGCCGAATCTTGACCCTGGGCAACAGGCAAAATGGTGGTAAAAACAAGAGAAAA
rJMFF013N09- AGCCGGAGCCGAATCTTGACCCTGGGCAACAGGCAAAATGGTGGTAAAAACAAGAGAAAA
JMFF050A02+ AGCCGGAGCCGAATCTTGACCCTGGGCAACAGGCAAAATGGTGGTAAAAACAAGAGAAAA
____________________________________________________________
consensus AGCCGGAGCCGAATCTTGACCCTGGGCAACAGGCAAAATGGTGGTAAAAACAAGAGAAAA
. : . : . : . : . : . :
rJMFF050A02- TGCGGCAATGAAAGCCAAGATCGAGTTACAACTTCTTGTCATTTTTATTTCTCTTTTTTT
rJMFF019O09- TGCGGCAATGAAAGCCAAGATCGAGTTACAACTTCTTGTCATTTTTATTTCTCTTTTTTT
rJMFF026B11- TGCGGCAATGAAAGCCAAGATCGAGTTACAACTTCTTGTCATTTTTATTTCTCTTTTTTT
rJMFF033B08- TGCGGCAATGAAAGCCAANATCGAGTTACAACTTCTTGTCATTNTTATTTCTCTTTTTTT
JMFN028A02+ TGCGGCAATGAAAGCCAAGATCGAGTTACAACTTCTTGTCATTTTTATTTCTCTTTTTTT
JMFN003I13+ TGCGGCAATGAAAGCCAAGATCGAGTTACAACTTCTTGTCATTTTTATTTCTCTTTTTTT
JMFF015N02+ TGCGGCAATGAAAGCCAAGATCGAGTTACAACTTCTTGTCATTTTTATTTCTC-TTTTTT
rJMFF008O12- TGCGGCAATGAAAGCCAAGATCGAGTTACAACTTCTTGTCATTTTTATTTCTCTTTTTTT
rJMFF015N02- TGCGGCAATGAAAGCCAAGATCGAGTTACAACTTCTTGTCATTTTTATTTCTC-TTTTTT
rJMSF030E16- TGCGGCAATGAAAGCCAAGATCGAGTTACAACTTCTTGTCATTTTTATTTCTCTTTTTTT
rJMFF013N09- TGCGGCAATGAAAGCCAAGATCGAGTTACAACTTCTTGTCATTTTTATTTCTCTTTTTTT
JMFF019O09+ TTTTTT
JMFF033B08+ TTTTTT
JMFF013N09+ TCTTTTTTT
JMFF050A02+ TGCGGCAATGAAAGCCAAGATCGAGTTACAACTTCTTGTCATTTTTATTTCTCTTTTTTT
JMFF008O12+ TCTTTTTTT
JMSF030E16+ AGATCGAGTTACAACTTCTTGTCNNTTTTATTTNTCTTTTTTT
____________________________________________________________
consensus TGCGGCAATGAAAGCCAAGATCGAGTTACAACTTCTTGTCATTTTTATTTCTCTTTTTTT
. : . : . : . : . : . :
rJMFF050A02- TTTTGTGGGTGAAAAAATAATTATTA-TTTTTTTGGGTGGGGGGATTTCTTCACACAAAC
rJMFF019O09- TTTTTGGGGGNGAAAAAANAATTATTATTTTTTTGGGGGGGGGGATTT
rJMFF026B11- TTTTGGGGGNGAAAAAANAATTATTATTTTTTT
rJMFF033B08- TTTTG
JMFN028A02+ TTTTGTGGGTGAAAAAATAATTATTA-TTTTTTTGGGTGGGGGGATTTCTTCACACAAAC
JMFN003I13+ TTTTGTGGGTGAAAAAATAATTATTA-TTTTTTTGGGTGGGGGGATTTCTTCACACAAAC
JMFF015N02+ TTTTGTGGGTGAAAAAATAATTATTA-TTTTTTTGGGTGGGGGGATTTCTTCACACAAAC
rJMFF008O12- TTTTGNGGGNGAAAAAANAATTATTA-TTTTTTTGGGGGGGGGGATTTCTTCACACAAAC
rJMFF015N02- TTTTGNGGGTGAAAAAATAATTATTA-TTTTTTTGGGNGGGGGGATTTCTTCACACAAAC
rJMSF030E16- TTTTGGGGGNGAAAAAATAATTATTA-TTTTTTNGGGNGGGGGGATTTCTTCNCNCAAAC
rJMFF013N09- TTTTGGGGGNGAAAAAATAATTATTATTTTTTTTGGGGGGGGGGATTTCTTCACACAAAN
JMFF019O09+ TTTTGTGGGTGAAAAAATAATTATTA-TTTTTTTGGGTGGGGGGATTTCTTCACACAAAC
JMFF033B08+ TTTTGTGGGTGAAAAAATAATTATTA-TTTTTTTGGGTGGGGGGATTTCTTCACACAAAC
JMFF013N09+ TTTTGTGGGTGAAAAAATAATTATTATTTTTTTTGGGTGGGGGGATTTCTTCACACAAAC
JMFF050A02+ TTTTGTGGGTGAAAAAATAATTATTA-TTTTTTTGGGTGGGGGGATTTCTTCACACAAAC
JMFF008O12+ TTTTGTGGGTGAAAAAATAATTATTA-TTTTTTTGGGTGGGGGGATTTCTTCACACAAAC
JMFF026B11+ TTTTTTTGGGTGGGGGGATTTCTTCACACAAAC
JMSF030E16+ TTTTGTGGGTGAAAAAATAATTATTA-TTTTTTTGGGTGGGGGGATTTCTTCACACAAAC
____________________________________________________________
consensus TTTTGTGGGTGAAAAAATAATTATTA-TTTTTTTGGGTGGGGGGATTTCTTCACACAAAC
. : . : . : . : . : . :
rJMFF050A02- AAGAGCTCTCTCTCTCTCTGCGGCAGCCTCCCAGAGAATCTCTCAAAAGAAAGGGCAGGC
JMFN028A02+ AAGAGCTCTCTCTCTCTCTGCGGCAGCCTCCCAGAGAATCTC
JMFN003I13+ AAGAGCTCTCTCTCTCTCTGCGGCAGCCTCCCAGAGAATCTCTCAAAAGAAAGGGCAGGC
JMFF015N02+ AAGAGCTCTCTCTCTCTCTGCGGCAGCCTCCCAGAGAATCTCTCAAAAGAAAGGGCAGGC
rJMFF008O12- AAAAGCTCTCTCTCTCTCTGNGGNAGCCTCCCAAAAAATCTCTCAAAAAAAAGGGCGGGC
rJMFF015N02- AAAAGCTCTCTCTCTCTCTGCGGCAGCCTCCCAAAAAATCTCTCAAAAAAAAGGGCAGGC
rJMSF030E16- AANAGCTCTCTCTCTCTCGGCGGNAGCCTCCCANAAAATCNCTCAAAANAANGGGCNGGC
rJMFF013N09- AAAAGCTCTCTCTCTCTCTGNGGNAGCCTCCCAAAAAATCTCTCAAAAAAAAGGGCAGGC
JMFF019O09+ AAGAGCTCTCTCTCTCTCTGCGGCAGCCTCCCAGAGAATCTCTCAAAAGAAAGGGCAGGC
JMFF033B08+ AAGAGCTCTCTCTCTCTCTGCGGCAGCCTCCCAGAGAATCTCTCAAAAGAAAGGGCAGGC
JMFF013N09+ AAGAGCTCTCTCTCTCTCTGCGGCAGCCTCCCAGAGAATCTCTCAAAAGAAAGGGCAGGC
JMFF050A02+ AAGAGCTCTCTCTCTCTCTGCGGCAGCCTCCCAGAGAATCTCTCAAAAGAAAGGGCAGGC
JMFF008O12+ AAGAGCTCTCTCTCTCTCTGCGGCAGCCTCCCAGAGAATCTCTCAAAAGAAAGGGCAGGC
JMFF026B11+ AAGAGCTCTCTCTCTCTCTGCGGCAGCCTCCCAGAGAATCTCTCAAAAGAAAGGGCAGGC
JMSF030E16+ AAGAGCTCTCTCTCTCTCTGCGGCAGCCTCCCAGAGAATCTCTCAAAAGAAAGGGCAGGC
____________________________________________________________
consensus AAGAGCTCTCTCTCTCTCTGCGGCAGCCTCCCAGAGAATCTCTCAAAAGAAAGGGCAGGC
. : . : . : . : . : . :
rJMFF050A02- TAAGAGAGAGAAAGAGAAAGAGAGAAAACCCCCAATGGCAATTCCTCTCTT
JMFN003I13+ TAAGAGAGAGAAAGAGAAAGAGAGAAAACCCAAAATGC
JMFF015N02+ TAAGAGAGAGAAAGAGAAAGAGAGAAAACCCAAAATGCAAATTCCTCTCTTCATCACC
rJMFF008O12- TAAGAGAGAGAAAGAGAAAGAGAGAAACCCCNAANTGCAAATTCCTCTCTTCATCAC
rJMFF015N02- TAAGAGAGAGAAAGAGAAAGAGAGAAAACCCAAAATGCAAATTCCTCTCTTCATCACC
rJMSF030E16- TAAGAGAGAGAAAGAGAAAGAGAGAAACCCCNANGNGCAANTTCCTCTCTTCATCACCA
rJMFF013N09- TANGAGAGAGAANGAGAAAGAGAGAAACCCCNAAANGCAANTTCCTCTCTTCA
JMFF019O09+ TAAGAGAGAGAAAGAGAAAGAGAGAAAACCCAAAATGCAAATTCCTCTCTTCAT
JMFF033B08+ TAAGAGAGAGAAAGAGAAAGAGAGAAAACCCAAAATGCAAATTCCTCTCTTCAT
JMFF013N09+ TAAGAGAGAGAAAGAGAAAGAGAGAAAACCCAAAATGCAAATTCCTCTCTTCA
JMFF050A02+ TAAGAGAGAGAAAGAGAAAGAGAGAAAACCCAAAATGCAAATTCCTCTCTTCATTACCA
JMFF008O12+ TAAGAGAGAGAAAGAGAAAGAGAGAAAACCCAAAATGCAAATTCCTCTCTTCATCAC
JMFF026B11+ TAAGAGAGAGAAAGAGAAAGAGAGAAAACCCAAAATGCAAATTCCTCTCTTCATCACCA
JMSF030E16+ TAAGAGAGAGAAAGAGAAAGAGAGAAAACCCAAAATGCAAATTCCTCTCTTCATCACCAC
____________________________________________________________
consensus TAAGAGAGAGAAAGAGAAAGAGAGAAAACCCAAAATGCAAATTCCTCTCTTCATCACCAC