Contig 003726:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034M22Sequence516003726 (3)ref|XP_006339835.1|5e-81PREDICTED: metal transporter Nramp3-like [Solanum tuberosum]590002897 (3)emb|CBI33737.3|8e-40unnamed protein product [Vitis vinifera]
JMSF013K09Sequence502003726 (3)ref|XP_006339835.1|1e-69PREDICTED: metal transporter Nramp3-like [Solanum tuberosum]762002897 (3)gb|KHN12967.1|1e-85Metal transporter Nramp3 [Glycine soja]
JMSF029L23Sequence707003726 (3)ref|XP_006339835.1|4e-112PREDICTED: metal transporter Nramp3-like [Solanum tuberosum]738002897 (3)ref|XP_003517323.1|6e-72PREDICTED: metal transporter Nramp3-like [Glycine max]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF029L23+ CCAATGAGTACAGCGAAAAGAGCTTCTAGTTTCCTCACTCCATAGTT
                      ____________________________________________________________
consensus CCAATGAGTACAGCGAAAAGAGCTTCTAGTTTCCTCACTCCATAGTT
 
. : . : . : . : . : . :
JMSF029L23+ CTCAAGAAACAGGAATATAAAGCAATCTAGAGCAGTTATGACGACACCAGCCCAGAGAGG
                      ____________________________________________________________
consensus CTCAAGAAACAGGAATATAAAGCAATCTAGAGCAGTTATGACGACACCAGCCCAGAGAGG
 
. : . : . : . : . : . :
JMFF034M22+ TGGCAATGGCACTGCCAATTACCTCTTGAATATC
JMSF029L23+ CAAGAAACCATTACTGAGAATCTTGATGGCAATGGCACTGCCAATTACCTCTTGAATATC
                      ____________________________________________________________
consensus CAAGAAACCATTACTGAGAATCTTGATGGCAATGGCACTGCCAATTACCTCTTGAATATC
 
. : . : . : . : . : . :
JMFF034M22+ GGCCCCAATCAGAGCCAGCTCAGCCATAACCCACAGCAACATCCTAGCCCACTTGGGGTA
JMSF013K09+ CAATCAGAGCCAGNTCAGCCATAACCCACAGCAACATCCTAGCCCACTTGGGGTA
JMSF029L23+ GGCCCCAATCAGAGCCAGCTCAGCCATAACCCACAGCAACATCCTAGCCCACTTGGGGTA
                      ____________________________________________________________
consensus GGCCCCAATCAGAGCCAGCTCAGCCATAACCCACAGCAACATCCTAGCCCACTTGGGGTA
 
. : . : . : . : . : . :
JMFF034M22+ CTCGTCCCGGCAGAGCTCAGCCAAGTGGCGGCCGGTAGCAACCCCGAGGCGGGCGGACAA
JMSF013K09+ CTCGTCCCGGCAGAGCTCAGCCAAGTGGCGGCCGGTAGCAACCCCGTGGCGGGCGGACAA
JMSF029L23+ CTCGTCCCGGCAGAGCTCAGCCAAGTGGCGGCCGGTAGCAACCCCGAGGCGGGCGGACAA
                      ____________________________________________________________
consensus CTCGTCCCGGCAGAGCTCAGCCAAGTGGCGGCCGGTAGCAACCCCGAGGCGGGCGGACAA
 
. : . : . : . : . : . :
JMFF034M22+ GAGCTGGACCAGCAGACCCATAGCCGTGGCCCAGAAGAGCAGCCACAGCAGGGAATAGCC
JMSF013K09+ GAGCTGGACCAGCAGACCCATAGCCGTGGCCCAGAAGAGCAGCCACAGCAGGGAATAGCC
JMSF029L23+ GAGCTGGACCAGCAGACCCATAGCCGTGGCCCAGAAGAGCAGCCACAGCAGGGAATAGCC
                      ____________________________________________________________
consensus GAGCTGGACCAGCAGACCCATAGCCGTGGCCCAGAAGAGCAGCCACAGCAGGGAATAGCC
 
. : . : . : . : . : . :
JMFF034M22+ GGCAATCGCGCCGGCCTGAAGATCGCCCTCCAAATTCCCGGGATCGAGAAAGGCTATGCT
JMSF013K09+ GGCAATCGCGCCGGCCTGAAGATCGCCCTCCAAATTCCCGGGATCGAGAAAGGCTATGCT
JMSF029L23+ GGCAATCGCGCCGGCCTGAAGATCGCCCTCCAAATTCCCGGGATCGAGAAAGGCTATGCT
                      ____________________________________________________________
consensus GGCAATCGCGCCGGCCTGAAGATCGCCCTCCAAATTCCCGGGATCGAGAAAGGCTATGCT
 
. : . : . : . : . : . :
JMFF034M22+ CATCAGGAACCCCGGGCCGGTGAAGAGCCAGAGCTTCTTCCATGAAAAAGGCGGCGTCTT
JMSF013K09+ CATCAGGAACCCCGGGCCGGTGAAGAGCCAGAGCTTCTTCCATGAAAAAGGCGGCGTCTT
JMSF029L23+ CATCAGGAACCCCGGGCCGGTGAAGAGCCAGAGCTTCTTCCATGAAAAAGGCGGCGTCTT
                      ____________________________________________________________
consensus CATCAGGAACCCCGGGCCGGTGAAGAGCCAGAGCTTCTTCCATGAAAAAGGCGGCGTCTT
 
. : . : . : . : . : . :
JMFF034M22+ TGTGCTGTCCTCCTCGGTTTCGGCTTCGTCAAGTCCGATGATGTGGACTTTCTCGGTGCG
JMSF013K09+ TGTGCTGTCCTCCTCGGTTTCGGCTTCGTCAAGTCCGATGATGTGGACTTTCTCGGTGCG
JMSF029L23+ TGTGCTGTCCTCCTCGGTTTCGGCTTCGTCAAGTCCGATGATGTGGACTTTCTCGGTGCG
                      ____________________________________________________________
consensus TGTGCTGTCCTCCTCGGTTTCGGCTTCGTCAAGTCCGATGATGTGGACTTTCTCGGTGCG
 
. : . : . : . : . : . :
JMFF034M22+ CTCATAGGCGCTATCTTCCTCGTCCGGATTCAGTAACGGCTGCTCGCTTCGGTTCTCTTC
JMSF013K09+ CTCATAGGCGCTATCTTCCTCGTCCGGATTCAGTAACGGCTGCTCGCTTCGGTTCTCTTC
JMSF029L23+ CTCATAGGCGCTATCTTCCTCGTCCGGATTCAGTAACGGCTGCTCGCTTCGGTTCTCTTC
                      ____________________________________________________________
consensus CTCATAGGCGCTATCTTCCTCGTCCGGATTCAGTAACGGCTGCTCGCTTCGGTTCTCTTC
 
. : . : . : . : . : . :
JMFF034M22+ TTCATGCGAACCCATTTCTATTTCCTTCACTCCCTCACAACAATCTCAGAGAGACCATTA
JMSF013K09+ TTCATGCGAACCCATTTCTATTTCCTTCACTCCCTCACAACAATCTCAGAGAGACCATTA
JMSF029L23+ TTCATGCGAACCCATTTCTATTTCCTTCACTCCCTCACAACAATCTCAGAGAGACCATTA
                      ____________________________________________________________
consensus TTCATGCGAACCCATTTCTATTTCCTTCACTCCCTCACAACAATCTCAGAGAGACCATTA
 
. : . : . : . : . : . :
JMFF034M22+ AC
JMSF013K09+ ACACGACCTTCGGGGAAGGTTTTCTT
JMSF029L23+ ACACGACCTTCGGGGAAGGTTTTCTTACACGCAAATGGAGCGGGGAAGAAAGAAGTTTTC
                      ____________________________________________________________
consensus ACACGACCTTCGGGGAAGGTTTTCTTACACGCAAATGGAGCGGGGAAGAAAGAAGTTTTC