| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN007A16 | Sequence | 594 | 003715 (4) | gb|KDP21002.1| | 2e-76 | hypothetical protein JCGZ_21473 [Jatropha curcas] | |||||
| JMSF005M08 | Sequence | 233 | 003715 (4) | ref|XP_009783013.1| | 4e-09 | PREDICTED: protein DEHYDRATION-INDUCED 19-like isoform X2 [Nicotiana sylvestris | 508 | 003540 (11) | ref|XP_006353230.1| | 4e-33 | PREDICTED: membrane-associated protein VIPP1, chloroplastic-like [Solanum tuber |
| JMSF028G22 | Sequence | 619 | 003715 (4) | ref|XP_006449398.1| | 9e-65 | hypothetical protein CICLE_v10016529mg [Citrus clementina] gb|ESR62638.1| hypoth | 697 | 003715 (4) | ref|XP_009622347.1| | 7e-48 | PREDICTED: protein DEHYDRATION-INDUCED 19-like isoform X1 [Nicotiana tomentosif |
This contig is upended
. : . : . : . : . : . :
rJMSF028G22- GTTACAAAGCAAGGAAAAATGAGAAAGATAAAAGAACATGGATTCATCGTCAT
____________________________________________________________
consensus GTTACAAAGCAAGGAAAAATGAGAAAGATAAAAGAACATGGATTCATCGTCAT
. : . : . : . : . : . :
rJMSF028G22- CGACCTCGGGTACAAAGATCCCTCATTGAGAGGAGTTGCGAAGATGGATATTTGGTTGAT
____________________________________________________________
consensus CGACCTCGGGTACAAAGATCCCTCATTGAGAGGAGTTGCGAAGATGGATATTTGGTTGAT
. : . : . : . : . : . :
rJMSF028G22- GATCATCATCTGTATTAATCCAGTTTCAAGAAACATTCAGATGCTGGGCTGTTAAAGTTA
____________________________________________________________
consensus GATCATCATCTGTATTAATCCAGTTTCAAGAAACATTCAGATGCTGGGCTGTTAAAGTTA
. : . : . : . : . : . :
rJMSF028G22- ATTCTTTGAGCCACCCAGAAAACCCCTTGATCTGAATCTTAGTTTAAACCCGAGATAGTA
____________________________________________________________
consensus ATTCTTTGAGCCACCCAGAAAACCCCTTGATCTGAATCTTAGTTTAAACCCGAGATAGTA
. : . : . : . : . : . :
rJMSF028G22- CTTCTTTCACAAAACTTACTGCATCTATTAGTCGGCTAACAAAGTCGATGCAAACAGATC
____________________________________________________________
consensus CTTCTTTCACAAAACTTACTGCATCTATTAGTCGGCTAACAAAGTCGATGCAAACAGATC
. : . : . : . : . : . :
rJMSF028G22- CTGAACGAAGATCGCTTTCCCAGTAGCCTGCTGTATCCTCTTCTCTCGCTCTTCAGAACT
____________________________________________________________
consensus CTGAACGAAGATCGCTTTCCCAGTAGCCTGCTGTATCCTCTTCTCTCGCTCTTCAGAACT
. : . : . : . : . : . :
rJMSF028G22- TAGCGACGGGTCAAAACTCAACTTCCATATATGTTGCGGTGTTACATTCTTTGAATTGGT
____________________________________________________________
consensus TAGCGACGGGTCAAAACTCAACTTCCATATATGTTGCGGTGTTACATTCTTTGAATTGGT
. : . : . : . : . : . :
rJMSF028G22- GTCCTCGATACTGGAAACCAGAGACTTTGAAATTTCGTCTGCTTCGGATCCAGGGAAGTT
____________________________________________________________
consensus GTCCTCGATACTGGAAACCAGAGACTTTGAAATTTCGTCTGCTTCGGATCCAGGGAAGTT
. : . : . : . : . : . :
rJMSF028G22- GAGAACGAGGGATTGAAGAAGGGGATCATTAGTTGCAGCACTAGATGATTTTGCACTGCC
____________________________________________________________
consensus GAGAACGAGGGATTGAAGAAGGGGATCATTAGTTGCAGCACTAGATGATTTTGCACTGCC
. : . : . : . : . : . :
rJMSF028G22- CGATCGATACCCACTGCCTCCTAGAAGCACCTGAAGATGGGCTTCCCGAAGATCTCTTCC
JMFN007A16+ GATCGATACCCACTGCCTCCTAGAAGCACCTGAAGATGGGCTTCCCGAAGATCTCTTCC
JMSF028G22+ GATCGATACCCACTGCCTCCTAGAAGCACCTGAAGATGGGCTTCCCGAAGATCTCTTCC
____________________________________________________________
consensus CGATCGATACCCACTGCCTCCTAGAAGCACCTGAAGATGGGCTTCCCGAAGATCTCTTCC
. : . : . : . : . : . :
rJMSF028G22- TAATAACGAGAGCGCTTGACTGCTGGGAATTGCAAGTCTACGTAGCCTTCGACGACGCTG
JMFN007A16+ TAATAACGAGAGCGCTTGACTGCTGGGAATTGCAAGTCTACGTAGCCTTCGACGACGCTG
JMSF028G22+ TAATAACGAGAGCGCTTGACTGCTGGGAATTGCAAGTCTACGTAGCCTTCGACGACGCTG
____________________________________________________________
consensus TAATAACGAGAGCGCTTGACTGCTGGGAATTGCAAGTCTACGTAGCCTTCGACGACGCTG
. : . : . : . : . : . :
rJMSF028G22- CAACTTGAGCAAGTGCCCATGTTGCAGTGTGATATGACTTA
JMFN007A16+ CAACTTGAGCAAGTGCCCATGTTGCAGTGTGATATGACTTAGCATGTCCCGGGATACTTT
JMSF028G22+ CAACTTGAGCAAGTGCCCATGTTGCAGTGTGATATGACTTAGCATGTCCCGGGATACTTT
____________________________________________________________
consensus CAACTTGAGCAAGTGCCCATGTTGCAGTGTGATATGACTTAGCATGTCCCGGGATACTTT
. : . : . : . : . : . :
JMFN007A16+ AATAGAACAAATGGGACAAACGGTGACTTTGGACTCGCAAGAGTGCTCATCCTCGAGATG
JMSF028G22+ AATAGAACAAATGGGACAAACGGTGACTTTGGACTCGCAAGAGTGCTCATCCTCGAGATG
____________________________________________________________
consensus AATAGAACAAATGGGACAAACGGTGACTTTGGACTCGCAAGAGTGCTCATCCTCGAGATG
. : . : . : . : . : . :
JMFN007A16+ GGAGCAAAGAGAGGAGATATCAAAATCCTCGTAGCAATAAGGGCAAGGGAAATCAGGTCG
JMSF028G22+ GGAGCAAAGAGAGGAGATATCAAAATCCTCGTAGCAATAAGGGCAAGGGAAATCAGGTCG
____________________________________________________________
consensus GGAGCAAAGAGAGGAGATATCAAAATCCTCGTAGCAATAAGGGCAAGGGAAATCAGGTCG
. : . : . : . : . : . :
JMFN007A16+ GACCTCTTCTTCAACCTCCAAATCGTCTATGCTCAACCGATCGAGCTGCGAGGAGAGTTG
JMSF028G22+ GACCTCTTCTTCAACCTCCAAATCGTCTATGCTCAACCGATCGAGCTGCGAGGAGAGTTG
____________________________________________________________
consensus GACCTCTTCTTCAACCTCCAAATCGTCTATGCTCAACCGATCGAGCTGCGAGGAGAGTTG
. : . : . : . : . : . :
JMFN007A16+ GGCGTTGGCGTGGTGGCGATGGCCGTGATGGTGGTGCTGCAAATTGAATTGCCGCTTGGC
JMSF005M08+ GTGATGGTGGTGCTGCAAATTGAATTGCCGCTTGGC
JMSF028G22+ GGCGTTGGCGTGGTGGCGATGGCCGTGATGGTGGTGCTGCAAATTGAATTGCCGCTTGGC
____________________________________________________________
consensus GGCGTTGGCGTGGTGGCGATGGCCGTGATGGTGGTGCTGCAAATTGAATTGCCGCTTGGC
. : . : . : . : . : . :
JMFN007A16+ AGCGGCGAGGCGAGAGGTCCAGAAATCAGAGTCCATGGAGAGAGACTAGAGAGAG
JMSF005M08+ AGCGGCGAGGCGAGAGGTCCAGAAATCAGAGTCCATGGAGAGAGACTAGAGAGAGAAGAA
JMSF028G22+ AGCGGCGAGGCGAGAGGTCCAGAAATCAGAGTCCATGGAGAGAGACTAGAGAGAGAAGAA
____________________________________________________________
consensus AGCGGCGAGGCGAGAGGTCCAGAAATCAGAGTCCATGGAGAGAGACTAGAGAGAGAAGAA
. : . : . : . : . : . :
JMSF005M08+ GACGATGAGAGGGAAATGGAGAAGAAATGAAGAATATAG
JMSF028G22+ GACGATGAGAGGGAAATGGAGAAGAAATGAAGAATATAGGCAAGAGAGAAGAATGCCGTC
____________________________________________________________
consensus GACGATGAGAGGGAAATGGAGAAGAAATGAAGAATATAGGCAAGAGAGAAGAATGCCGTC