Contig 003711:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF004G18+                                                     CCTCCAGCAGCATACTCC
                      ____________________________________________________________
consensus                                                       CCTCCAGCAGCATACTCC
 
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JMFF004G18+           ATAACTATTGCCAGATGAGTCGGTGTCAGCAAGACCTCCTTGAATCTGACTATATTAGGA
JMSF027M22+                     CCAGATGAGTCGGTGTCAGCAAGACCTCCTTGAATCTGACTATATTAGGA
                      ____________________________________________________________
consensus             ATAACTATTGCCAGATGAGTCGGTGTCAGCAAGACCTCCTTGAATCTGACTATATTAGGA
 
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JMFF004G18+           TGCTTCAATGATCTGTGATTCATGATTTCCCTTTCCACGTGTTCATCAATCTTTTGCCCT
JMSF027M22+           TGCTTCAATGATCTGTGATTCATGATTTCCCTTTCCACGTGTTCATCAATCTTTTGCCCT
                      ____________________________________________________________
consensus             TGCTTCAATGATCTGTGATTCATGATTTCCCTTTCCACGTGTTCATCAATCTTTTGCCCT
 
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JMFF004G18+           CTTTCAACGAATTTAACAGCAAAGAGGTCTTTGGTCCTCTTGTCCCTCACAAGCTTGGCA
JMSF027M22+           CTTTCAATGAATTTAACAGCAAAGAGGTCTTTGGTCCTCTTGTCCCTCACAAGCTTGGCA
                      ____________________________________________________________
consensus             CTTTCAATGAATTTAACAGCAAAGAGGTCTTTGGTCCTCTTGTCCCTCACAAGCTTGGCA
 
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JMFF004G18+           ACCCCAAAATTCCCCGACCCCAAATCCTTCACAATTTCATAGGCATCCATGACACCAACA
JMSF027M22+           ACCCCAAAATTCCCCGACCCCAAATCCTTCACAATTTCATAGGCATCCATGACACCAACA
                      ____________________________________________________________
consensus             ACCCCAAAATTCCCCGACCCCAAATCCTTCACAATTTCATAGGCATCCATGACACCAACA
 
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JMFF004G18+           AATAAAATTGGAATTTCAAGAAAAAGATGAAATCTTTATTGGTTTTTTCCCCACTCTTTG
JMSF027M22+           AATAAAATTGGAATTTCAAGAAAAAGATGAAATCTTTATTGGTTTTTTCCCCACTCTTTG
                      ____________________________________________________________
consensus             AATAAAATTGGAATTTCAAGAAAAAGATGAAATCTTTATTGGTTTTTTCCCCACTCTTTG
 
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JMFF004G18+           CAATCCCATGAAATGCTTAATGGGAACTTTAACAAGCTGGGCTTGAGAGATATCCAGAAA
JMSF027M22+           CAATCCCATGAAATGCTTAATGGGAACTTTAACAAGCTGGGCTTGAGAGATATCCAGAAA
                      ____________________________________________________________
consensus             CAATCCCATGAAATGCTTAATGGGAACTTTAACAAGCTGGGCTTGAGAGATATCCAGAAA
 
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JMFF004G18+           GCACCGAAAGCAAAGAGGAGTGGTTTGGCAGTGTGGTTGGGAGCAGAAAAGAACAGCGCA
JMSF027M22+           GCACCGAAAGCAAAGAGGAGTGGTTTGGCAGTGTGGTTGGGAGCAGAAAAGAACAGCGCA
                      ____________________________________________________________
consensus             GCACCGAAAGCAAAGAGGAGTGGTTTGGCAGTGTGGTTGGGAGCAGAAAAGAACAGCGCA
 
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JMFF004G18+           ACGACTCAACGGGGGGGAGTAGACTGCGTTAGGGAAGACCGCGGAGCGAGTGGGAAGT  
JMSF027M22+           ACGACTCAACGGGGGGGAGTAGACTGCGTTAGGGAAGACCGCGGAGCGAGTGGGAAGTGA
                      ____________________________________________________________
consensus             ACGACTCAACGGGGGGGAGTAGACTGCGTTAGGGAAGACCGCGGAGCGAGTGGGAAGTGA
 
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JMSF027M22+           TTAGACACACGTGGAATAAAGCGGAAGGTTAGAAGAACGAGGCATGAATGTGTCACCTAT
                      ____________________________________________________________
consensus             TTAGACACACGTGGAATAAAGCGGAAGGTTAGAAGAACGAGGCATGAATGTGTCACCTAT
 
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JMSF027M22+           CACACTACGCGACAACCTTGATTTTGTGCTGTCTGTCTGAGGTTTCTCTCTTTCCTTCCC
                      ____________________________________________________________
consensus             CACACTACGCGACAACCTTGATTTTGTGCTGTCTGTCTGAGGTTTCTCTCTTTCCTTCCC
 
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JMSF027M22+           TCTTCCCTTTCTTTTTCTTTTCACTGTTCCCAATTCGGAAGGATCGGAGTATCAAAAACC
                      ____________________________________________________________
consensus             TCTTCCCTTTCTTTTTCTTTTCACTGTTCCCAATTCGGAAGGATCGGAGTATCAAAAACC