Contig 003700:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022P20Sequence544003700 (4)ref|NP_001234279.1|6e-29anti-PCD protein-like [Solanum lycopersicum] gb|ABA41597.1| putative anti-PCD pr767001109 (3)ref|XP_011022240.1|3e-58PREDICTED: thiol-disulfide oxidoreductase LTO1 isoform X2 [Populus euphratica]
JMFF038M04Sequence612003700 (4)ref|NP_001234279.1|1e-28anti-PCD protein-like [Solanum lycopersicum] gb|ABA41597.1| putative anti-PCD pr766001109 (3)ref|XP_011022240.1|3e-58PREDICTED: thiol-disulfide oxidoreductase LTO1 isoform X2 [Populus euphratica]
JMSF019E02Sequence313003700 (4)ref|XP_006340794.1|57.8PREDICTED: uncharacterized protein LOC102581146 [Solanum tuberosum]742001109 (3)ref|XP_011022240.1|1e-79PREDICTED: thiol-disulfide oxidoreductase LTO1 isoform X2 [Populus euphratica]
JMSF026C20Sequence649003700 (4)ref|NP_001234279.1|2e-28anti-PCD protein-like [Solanum lycopersicum] gb|ABA41597.1| putative anti-PCD pr

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF038M04+ AGATTACAGAGTATGAAGCGGCACAAGTTCACTAGGGGCACTGGGGCA
JMSF026C20+ GAGATTACAGAGTATGAAGCGGCACAAGTTCACTAGGGGCACTGGGGCA
                      ____________________________________________________________
consensus GAGATTACAGAGTATGAAGCGGCACAAGTTCACTAGGGGCACTGGGGCA
 
. : . : . : . : . : . :
JMFF038M04+ GATCATTCACGAAATGAGANCAGAAATTAAGAGTAGCAATACTGAAGGAAATAAAAATAT
JMFF022P20+ CAGAAATTAAGAGTAGCAATACTGAAGGAAATAAAAATAT
JMSF026C20+ GATCATTCACGAAATGAGAACAGAAATTAAGAGTAGCAATACTGAAGGAAATAAAAATAT
                      ____________________________________________________________
consensus GATCATTCACGAAATGAGAACAGAAATTAAGAGTAGCAATACTGAAGGAAATAAAAATAT
 
. : . : . : . : . : . :
JMFF038M04+ CATAGGTCACATCGATATGCATCAAGAACTTCAAGAGATTACCAAAAACAACTGAATAGC
JMFF022P20+ CATAGGTCACATCGATATGCATCAAGAACTTCAAGAGATTACCAAAAACAACTGAATAGC
JMSF026C20+ CATAGGTCACATCGATATGCATCAAGAACTTCAAGAGATTACCAAAAACAACTGAATAGC
                      ____________________________________________________________
consensus CATAGGTCACATCGATATGCATCAAGAACTTCAAGAGATTACCAAAAACAACTGAATAGC
 
. : . : . : . : . : . :
JMFF038M04+ TGCTGTTAAGGATGTCGCCGCAGCTGCCACCACCAACGGGGCAAAAGGCATCAGACTCCG
JMFF022P20+ TGCTGTTAAGGATGTCGCCGCAGCTGCCACCACCAACGGGGCAAAAGGCATCAGACTCCG
JMSF026C20+ TGCTGTTAAGGATGTCGCCGCAGCTGCCACCGCCAACGGGGCAAAAGGCATCAGACTCCG
                      ____________________________________________________________
consensus TGCTGTTAAGGATGTCGCCGCAGCTGCCACCACCAACGGGGCAAAAGGCATCAGACTCCG
 
. : . : . : . : . : . :
JMFF038M04+ TGAGTTTGAGGTACGTCAAGTACGAAGTTTCCAGGAATCCGATGCCTCCCAGGGCTGCAC
JMFF022P20+ TGAGTTTGAGGTACGTCAAGTACGAAGTTTCCAGGAATCCGATGCCTCCCAGGGCTGCAC
JMSF019E02+ CCAGGAATCCGATGCCTCCCAGGGCTGCAC
JMSF026C20+ TGAGTTTGAGGTACGTCAAGTACGAAGTTTCCAGGAATCCGATGCCTCCCAGGGCTGCAC
                      ____________________________________________________________
consensus TGAGTTTGAGGTACGTCAAGTACGAAGTTTCCAGGAATCCGATGCCTCCCAGGGCTGCAC
 
. : . : . : . : . : . :
JMFF038M04+ ACCAATTGTATGCTGAAATGCTCGAACCACTGCTAGTAGAAGGAGACGACAACTCCTCCG
JMFF022P20+ ACCAATTGTATGCTGAAATGCTCGAACCACTGCTAGTAGAAGGAGACGACAACTCCTCCG
JMSF019E02+ ACCAATTGTATGCTGAAATGCTCGAACCACTGCTAGTAGAAGGAGACGACAACTCCTCCG
JMSF026C20+ ACCAATTGTATGCTGAAATGCTCGAACCACTGCTAGTAGAAGGAGACGACAACTCCTCCG
                      ____________________________________________________________
consensus ACCAATTGTATGCTGAAATGCTCGAACCACTGCTAGTAGAAGGAGACGACAACTCCTCCG
 
. : . : . : . : . : . :
JMFF038M04+ TCTTGGATTCTTTCTCCGCGTCTGTAACTTGCTCCGACGAGCAGTGCACTCGAAGCATCA
JMFF022P20+ TCTTGGATTCTTTCTCCGCGTCTGTAACTTGCTCCGACGAGCAGTGCACTCGAAGCATCA
JMSF019E02+ TCTTGGATTCTTTCTCCGCGTCTGTAACTTGCTCCGACGAGCAGTGCACTCGAAGCATCA
JMSF026C20+ TCTTGGATTCTTTCTCCGCGTCTGTAACTTGCTCCGACGAGCAGTGCACTCGAAGCATCA
                      ____________________________________________________________
consensus TCTTGGATTCTTTCTCCGCGTCTGTAACTTGCTCCGACGAGCAGTGCACTCGAAGCATCA
 
. : . : . : . : . : . :
JMFF038M04+ GCAATTGCCGATCGCGACCGCTCTTGAGTTGTAAGGGAATAGATAGTGAATTGGAACGAG
JMFF022P20+ GCAATTGCCGATCGCGACCGCTCTTGAGTTGTAAGGGAATAGATAGTGAATTGGAACGAG
JMSF019E02+ GCAATTGCCGATCGCGACCGCTCTTGAGTTGTAAGGGAATAGATAGTGAATTGGAACGAG
JMSF026C20+ GCAATTGCCGATCGCGACCGCTCTTGAGTTGTAAGGGAATAGATAGTGAATTGGAACGAG
                      ____________________________________________________________
consensus GCAATTGCCGATCGCGACCGCTCTTGAGTTGTAAGGGAATAGATAGTGAATTGGAACGAG
 
. : . : . : . : . : . :
JMFF038M04+ AGGAGAAGAGAAGAGATGAGTGGTTGAATAGTGGGGAAGACGAGACGCCGATGAGACTCG
JMFF022P20+ AGGAGAAGAGAAGAGATGAGTGGTTGAATAGTGGGGAAGACGAGACGCCGATGAGACTCG
JMSF019E02+ AGGAGAAGAGAAGAGATGAGTGGTTGAATAGTGGGGAAGACGAGACGCCGATGAGACTCG
JMSF026C20+ AGGAGAAGAGAAGAGATGAGTGGTTGAATAGTGGGGAAGACGAGACGCCGATGAGACTCG
                      ____________________________________________________________
consensus AGGAGAAGAGAAGAGATGAGTGGTTGAATAGTGGGGAAGACGAGACGCCGATGAGACTCG
 
. : . : . : . : . : . :
JMFF038M04+ CCATCAGCTCCTCCGTCGAGCGGTGGCGGGGGTGGTTTGACTAGATTTATTGGCGGTGGA
JMFF022P20+ CCATCAGCTCCTCCGTCGAGCGGTGGCGGGGGTGGTTTGACTAGATTTATTGGCGGTGGA
JMSF019E02+ CCATCAGCTCCTCCGTCGAGCGGTGGCGGGGGTGGTTTGACT
JMSF026C20+ CCATCAGCTCCTCCGTCGAGCGGTGGCGGGGGTGGTTTGACTAGATTTATTGGCGGTGGA
                      ____________________________________________________________
consensus CCATCAGCTCCTCCGTCGAGCGGTGGCGGGGGTGGTTTGACTAGATTTATTGGCGGTGGA
 
. : . : . : . : . : . :
JMFF038M04+ AGAGCGGAATTTGACTGATTTGTT
JMFF022P20+ AGAGCGGAATTTGACTGATTTGTT
JMSF026C20+ AGAGCGGAATTTGACTGATTTGTTGAAAGATTTATTTTTGGAGTTTTGGTTTAGTAACCC
                      ____________________________________________________________
consensus AGAGCGGAATTTGACTGATTTGTTGAAAGATTTATTTTTGGAGTTTTGGTTTAGTAACCC