Contig 003689:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019A14Sequence565003689 (3)gb|AGD98704.1|1e-23bZIP transcription factor family protein 6 [Camellia sinensis]707005686 (4)ref|XP_009787496.1|5e-61PREDICTED: light-inducible protein CPRF2-like [Nicotiana sylvestris]
JMSF024P17Sequence701003689 (3)gb|AGD98704.1|7e-28bZIP transcription factor family protein 6 [Camellia sinensis]657005686 (4)gb|ACP31202.1|1e-51G/HBF-1 [Solanum melongena]
JMSF029G09Sequence631003689 (3)gb|AGD98704.1|4e-28bZIP transcription factor family protein 6 [Camellia sinensis]772005686 (4)ref|NP_001236299.1|8e-96G/HBF-1 protein [Glycine max] emb|CAA71687.1| G/HBF-1 [Glycine max]

Alignment

This contig is upended


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JMSF024P17+                              TATGACAGGCATAACATTTCTATATAAAGTAATAAATCTAG
                      ____________________________________________________________
consensus                                TATGACAGGCATAACATTTCTATATAAAGTAATAAATCTAG
 
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JMSF029G09+                                      TCTGAGATCCTAGTTGTGGCGTATGGGAGGCCA
JMSF024P17+           GAAAGAACAACTAACCTTTAACAGGCGTCTGAGATCCTAGTTGTGGCGTATGGGAGGCCA
                      ____________________________________________________________
consensus             GAAAGAACAACTAACCTTTAACAGGCGTCTGAGATCCTAGTTGTGGCGTATGGGAGGCCA
 
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JMSF029G09+           GCGATGTGTTTTCAGAAGGCACCGAGGCTGAATCTTGAGCTTTCATGTTATTTGCGCGAG
JMFF019A14+                                             TTGAGCTTTCATGTTATTTGCGCGAG
JMSF024P17+           GCGATGTGTTTTCAGAAGGCACCGAGGCTGAATCTTGAGCTTTCATGTTATTTGCGCGAG
                      ____________________________________________________________
consensus             GCGATGTGTTTTCAGAAGGCACCGAGGCTGAATCTTGAGCTTTCATGTTATTTGCGCGAG
 
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JMSF029G09+           TCAAAGCAACGGCGGCGCAAGCCAAATCGAGGCGCTTTTTGAGGAATGCCTGGTAGTCCT
JMFF019A14+           TCAAAGCAACGGCGGCGCAAGCCAAATCGAGGCGCTTTTTGAGGAATGCCTGGTAGTCCT
JMSF024P17+           TCAAAGCAACGGCGGCGCAAGCCAAATCGAGGCGCTTTTTGAGGAATGCCTGGTAGTCCT
                      ____________________________________________________________
consensus             TCAAAGCAACGGCGGCGCAAGCCAAATCGAGGCGCTTTTTGAGGAATGCCTGGTAGTCCT
 
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JMSF029G09+           CCGAATCAATCGGAATATCCGAGGCAGCTCCCGACCCTAACGACGTCGTCGTCTTTGCAG
JMFF019A14+           CCGAATCAATCGGAATATCCGAGGCAGCTCCCGACCCTAACGACGTCGTCGTCTTTGCAG
JMSF024P17+           CCGAATCAATCGGAATATCCGAGGCAGCTCCCGACCCTAACGACGTCGTCGTCTTTGCAG
                      ____________________________________________________________
consensus             CCGAATCAATCGGAATATCCGAGGCAGCTCCCGACCCTAACGACGTCGTCGTCTTTGCAG
 
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JMSF029G09+           TTGTAGTCGCAGTCACCGTCTCCACCTCCTTGCCGGAGCTCTTGTAACCATAATCCGATT
JMFF019A14+           TTGTAGTCGCAGTCACCGTCTCCACCTCCTTGCCGGAGCTCTTGTAACCATAATCCGATT
JMSF024P17+           TTGTAGTCGCAGTCACCGTCTCCACCTCCTTGCCGGAGCTCTTGTAACCATAATCCGATT
                      ____________________________________________________________
consensus             TTGTAGTCGCAGTCACCGTCTCCACCTCCTTGCCGGAGCTCTTGTAACCATAATCCGATT
 
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JMSF029G09+           TCCGATCAGCATCGAGCCTCCCGCCCTGGATCTCAACCACATCGCTCGGAAGAGACTTTT
JMFF019A14+           TCCGATCAGCATCGAGCCTCCCGCCCTGGATCTCAACCACATCGCTCGGAAGAGACTTTT
JMSF024P17+           TCCGATCAGCATCGAGCCTCCCGCCCTGGATCTCAACCACATCGCTCGGAAGAGACTTTT
                      ____________________________________________________________
consensus             TCCGATCAGCATCGAGCCTCCCGCCCTGGATCTCAACCACATCGCTCGGAAGAGACTTTT
 
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JMSF029G09+           GCGAATGAGAACTAGAAGTGGCGGAGGAAGCAGCGGCAACCGAAGACGGCGGAGCAGCAG
JMFF019A14+           GCGAATGAGAACTAGAAGTGGCGGAGGAAGCAGCGGCAACCGAAGACGGCGGAGCAGCAG
JMSF024P17+           GCGAATGAGAACTAGAAGTGGCGGAGGAAGCAGCGGCAACCGAAGACGGCGGAGCAGCAG
                      ____________________________________________________________
consensus             GCGAATGAGAACTAGAAGTGGCGGAGGAAGCAGCGGCAACCGAAGACGGCGGAGCAGCAG
 
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JMSF029G09+           CCTGATCGACGGCGGCGACTGCGGCGGGGGAGGAGTTAGCTGAGGCTTCCTGCAGGAAGC
JMFF019A14+           CCTGATCGACGGCGGCGACTGCGGCGGGGGAGGAGTTAGCTGAGGCTTCCTGCAGGAAGC
JMSF024P17+           CCTGATCGACGGCGGCGACTGCGGCGGGGGAGGAGTTAGCTGAGGCTTCCTGCAGGAAGC
                      ____________________________________________________________
consensus             CCTGATCGACGGCGGCGACTGCGGCGGGGGAGGAGTTAGCTGAGGCTTCCTGCAGGAAGC
 
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JMSF029G09+           GTTGGAAGGCCCACTCCGAGGAGCTGCGGTTCATCACTTTAGATGAGGCGGAGGAATCTA
JMFF019A14+           GTTGGAAGGCCCACTCCGAGGAGCTGCGGTTCATCACTTTAGATGAGGCGGAGGAATCTA
JMSF024P17+           GTTGGAAGGCCCACTCCGAGGAGCTGCGGTTCATCACTTTAGATGAGGCGGAGGAATCTA
                      ____________________________________________________________
consensus             GTTGGAAGGCCCACTCCGAGGAGCTGCGGTTCATCACTTTAGATGAGGCGGAGGAATCTA
 
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JMSF029G09+           TGTCGAGGTCCGCCGCCTGCGACAGCCGAACCGGCGGCGGCGACCAGAATTGGTCAGCTA
JMFF019A14+           TGTCGAGGTCCGCCGCCTGCGACAGCCGAACCGGCGGCGGCGACCAGAATTGGTCAGCTA
JMSF024P17+           TGTCGAGGTCCGCCGCCTGCGACAGCCGAACCGGCGGCGGCGACCAGAATTGGTCAGCTA
                      ____________________________________________________________
consensus             TGTCGAGGTCCGCCGCCTGCGACAGCCGAACCGGCGGCGGCGACCAGAATTGGTCAGCTA
 
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JMSF029G09+           TATCCTCGACGGAAAACACCCTATCCATTTATCTCTCCGTCAAATCGTCAATTCCCT   
JMFF019A14+           TATCCTCGACGGAAAACACCCTATCCATTTATCTCTCCGTCAAATCGTCAATTCCCT   
JMSF024P17+           TATCCTCGACGGAAAACACCCTATCCATTTATCTCTCCGTCAAATCGTCAATTCCCTATC
                      ____________________________________________________________
consensus             TATCCTCGACGGAAAACACCCTATCCATTTATCTCTCCGTCAAATCGTCAATTCCCTATC