Contig 003678:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF024A22-                                                            GAAGAAATTA
                      ____________________________________________________________
consensus                                                               GAAGAAATTA
 
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rJMSF024A22-          AGAGCTTCCACTATTATTGGAAGAAAGAGGAAAATATCATCCGAAAACAAAGGTCAGTTG
                      ____________________________________________________________
consensus             AGAGCTTCCACTATTATTGGAAGAAAGAGGAAAATATCATCCGAAAACAAAGGTCAGTTG
 
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rJMSF024A22-          ATCTATTACTGTGTATAAATTTCGTAAGGGCTACATCTCTATTCATTTTACCTTTTTTGA
                      ____________________________________________________________
consensus             ATCTATTACTGTGTATAAATTTCGTAAGGGCTACATCTCTATTCATTTTACCTTTTTTGA
 
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rJMSF024A22-          TATTGTATTTCCTCTTGCTTTGATATAAATTCGAATCAATTAAACCATATTAACAGTGTA
                      ____________________________________________________________
consensus             TATTGTATTTCCTCTTGCTTTGATATAAATTCGAATCAATTAAACCATATTAACAGTGTA
 
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rJMSF024A22-          GTTTTGGTACTTAACATTCAGTTTCTCATAATCTTTTATATTAAATGTCTTTTTATTTTC
                      ____________________________________________________________
consensus             GTTTTGGTACTTAACATTCAGTTTCTCATAATCTTTTATATTAAATGTCTTTTTATTTTC
 
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rJMSF024A22-          TAACATGAGAAAAAACTACAAAAATTTTAATCTTCATTATGCTGATTATGATACAGTACA
JMSF024A22+                     AAAAACTACAAAAATTTTAATCTTCATTATGCTGATTATGATACAGTACA
                      ____________________________________________________________
consensus             TAACATGAGAAAAAACTACAAAAATTTTAATCTTCATTATGCTGATTATGATACAGTACA
 
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rJMSF024A22-          CAACTTTATTTTATTTCAATTTTATTTTTAAGAATACAAATTACATTTAAAGATATAGTA
JMSF024A22+           CAACTTTATTTTATTTCAATTTTATTTTTAAGAATACAAATTACATTTAAAGATATAGTA
                      ____________________________________________________________
consensus             CAACTTTATTTTATTTCAATTTTATTTTTAAGAATACAAATTACATTTAAAGATATAGTA
 
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rJMSF024A22-          TAATAACTTTGCATTTTTTTATTCTAAAAAATATATAAAATAGTTCAGATCTACTTATCT
JMSF024A22+           TAATAACTTTGCATTTTTTTATTCTAAAAAATATATAAAATAGTTCAGATCTACTTATCT
                      ____________________________________________________________
consensus             TAATAACTTTGCATTTTTTTATTCTAAAAAATATATAAAATAGTTCAGATCTACTTATCT
 
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rJMSF024A22-          TTAACGCGTCCTTCTTCGTGACTGCTGGAATAAATCAATCTATTTGCCAACTGTTTGCAT
JMSF024A22+           TTAACGCGTCCTTCTTCGTGACTGCTGGAATAAATCAATCTATTTGCCAACTGTTTGCAT
                      ____________________________________________________________
consensus             TTAACGCGTCCTTCTTCGTGACTGCTGGAATAAATCAATCTATTTGCCAACTGTTTGCAT
 
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rJMSF024A22-          GTACGGGAAAATACCATTTTTCCTGATCTTCTTCTATATTCCGGATCTAAGAACCACTCT
JMSF024A22+           GTACGGGAAAATACCATTTTTCCTGATCTTCTTCTATATTCCGGATCTAAGAACCACTCT
                      ____________________________________________________________
consensus             GTACGGGAAAATACCATTTTTCCTGATCTTCTTCTATATTCCGGATCTAAGAACCACTCT
 
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rJMSF024A22-          GTATCAACCATGGATGACGAATTAATTGACAGAAATCTTGGTTTGCATGTACATATAGCG
JMSF024A22+           GTATCAACCATGGATGACGAATTAATTGACAGAAATCTTGGTTTGCATGTACATATAGCG
                      ____________________________________________________________
consensus             GTATCAACCATGGATGACGAATTAATTGACAGAAATCTTGGTTTGCATGTACATATAGCG
 
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rJMSF024A22-          ATGTTTCACACTTAGATCTTGAGATTTTATTGACGGAAGCTATCTGTATCGCCATAATTT
JMSF024A22+           ATGTTTCACACTTAGATCTTGAGATTTTATTGACGGAAGCTATCTGTATCGCCATAATTT
                      ____________________________________________________________
consensus             ATGTTTCACACTTAGATCTTGAGATTTTATTGACGGAAGCTATCTGTATCGCCATAATTT
 
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rJMSF024A22-          CGAAGTTTTTTGCTCCGATCATTAAGCTGCTATGGCGGTGTGTAGAGGAGTGGTCCTTCT
JMSF024A22+           CGAAGTTTTTTGCTCCGATCATTAAGCTGCTATGGCGGTGTGTAGAGGAGTTGTTCTTCT
                      ____________________________________________________________
consensus             CGAAGTTTTTTGCTCCGATCATTAAGCTGCTATGGCGGTGTGTAGAGGAGTTGTTCTTCT
 
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rJMSF024A22-          CTGCTCTTCGANNGCTGATCTGGAGGAATAA                             
JMSF024A22+           CTGCTCTTCGAATGCTGATCTTGAGGAATAAACAAATTAATAGTTGTTCATACGGAAATT
                      ____________________________________________________________
consensus             CTGCTCTTCGAATGCTGATCTTGAGGAATAAACAAATTAATAGTTGTTCATACGGAAATT
 
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JMSF024A22+           AAATCTGTGGAACAGTAGATGATGAACAGATTTCTAAATGGGTAGAGTGAGGTTGTTCTT
                      ____________________________________________________________
consensus             AAATCTGTGGAACAGTAGATGATGAACAGATTTCTAAATGGGTAGAGTGAGGTTGTTCTT
 
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JMSF024A22+           GAACATGAGAGAGCTCAGAGCATGAAGTTGAAGGGCGAAATGGTGAAGAATGGCAAAACC
                      ____________________________________________________________
consensus             GAACATGAGAGAGCTCAGAGCATGAAGTTGAAGGGCGAAATGGTGAAGAATGGCAAAACC