Contig 003659:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011G20Sequence473003659 (2)ref|XP_006345061.1|7e-27PREDICTED: kinesin-like protein KIF18B-like [Solanum tuberosum]749022307ref|XP_009617995.1|5e-37PREDICTED: kinesin-like protein KIF18B isoform X1 [Nicotiana tomentosiformis]
JMSF021E08Sequence585003659 (2)ref|XP_009617996.1|1e-27PREDICTED: kinesin-like protein KIF18B isoform X2 [Nicotiana tomentosiformis]745024553ref|XP_009617996.1|9e-58PREDICTED: kinesin-like protein KIF18B isoform X2 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF021E08+                        TCTCCGCCGCCCACAGTTGCCGCCGCCGCCGCAGCCACGTTTTCCTT
                      ____________________________________________________________
consensus                          TCTCCGCCGCCCACAGTTGCCGCCGCCGCCGCAGCCACGTTTTCCTT
 
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JMFF011G20+            TCCTCATCCGGCGGCCGGTGTAGCGGCGGCGGAGGTTGCCAAATGGGCATTGTGTTCTC
JMSF021E08+           CTCCTCATCCGGCGGCCGGTGTAGCGGCGGCGGAGGTTGCCAAATGGGCATTGTGTTCTC
                      ____________________________________________________________
consensus             CTCCTCATCCGGCGGCCGGTGTAGCGGCGGCGGAGGTTGCCAAATGGGCATTGTGTTCTC
 
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JMFF011G20+           CTTCATCACGTTACCAAATGGTCTGGGCTCTTTGCCGTCTTTTCCGTCCTTTTTCGCAGA
JMSF021E08+           CTTCATCACGTTACCAAATGGTCTGGGCTCTTTGCCGTCTTTTCCGTCCTTTTTCGCAGA
                      ____________________________________________________________
consensus             CTTCATCACGTTACCAAATGGTCTGGGCTCTTTGCCGTCTTTTCCGTCCTTTTTCGCAGA
 
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JMFF011G20+           GTTGAGGAGATCCACACTAGGGTGCGTGGTGAATCTTGNATCCTCGGCCTTTAAAGACTG
JMSF021E08+           GTTGAGGAGATCCACACTAGGGTGCGTGGTGAATCTTGGATCCTCGGCCTTTAAAGACTG
                      ____________________________________________________________
consensus             GTTGAGGAGATCCACACTAGGGTGCGTGGTGAATCTTGGATCCTCGGCCTTTAAAGACTG
 
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JMFF011G20+           GTTCTTGAGCGCCATTGAGGCTCGCTTTTGCTGCTCATACAAAAGGCTCAGAGCTTTCAT
JMSF021E08+           GTTCTTGAGCGCCATTGAGGCTCGCTTTTGCTGCTCATACAAAAGGCTCAGAGCTTTCAT
                      ____________________________________________________________
consensus             GTTCTTGAGCGCCATTGAGGCTCGCTTTTGCTGCTCATACAAAAGGCTCAGAGCTTTCAT
 
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JMFF011G20+           CTTCTCTTTCAACCCATGGTGCGGGTTTCTCATCGCCGCGGCGGCGGCGGCGGCGGAACC
JMSF021E08+           CTTCTCTTTCAACCCATGGTGCGGGTTTCTCATCGCCGCGGCGGCGGCGGCGGCGGAACC
                      ____________________________________________________________
consensus             CTTCTCTTTCAACCCATGGTGCGGGTTTCTCATCGCCGCGGCGGCGGCGGCGGCGGAACC
 
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JMFF011G20+           CACTCCATCGAGTTCTTGAATTTCCGGCTTGGCTCTGGTTTTGCTGCTAGTGATCTGAGA
JMSF021E08+           CACTCCATCGAGTTCTTGAATTTCCGGCTTGGCTCTGGTTTTGCTGCTAGTGATCTGAGA
                      ____________________________________________________________
consensus             CACTCCATCGAGTTCTTGAATTTCCGGCTTGGCTCTGGTTTTGCTGCTAGTGATCTGAGA
 
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JMFF011G20+           TCTTGTTGAAACCGGCATTTTCATCTGCAAAAACCTGGACCCTATCTACTGAAACTGCTA
JMSF021E08+           TCTTGTTGAAACCGGCATTTT--TCTGCAAAAACCTGGACCCTATCTACTGAAACTGCTA
                      ____________________________________________________________
consensus             TCTTGTTGAAACCGGCATTTTCATCTGCAAAAACCTGGACCCTATCTACTGAAACTGCTA
 
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JMFF011G20+           GAAGCCTAGAACTGCAAAAAGTCAAGAACTTTGTCGTCGAAAAATCAAGAATTT      
JMSF021E08+           GAAGCCTAGAACTGCAAAAAGTCAAGAACTTTGTCGTCGAAAAATCAAGAATTTGATGGT
                      ____________________________________________________________
consensus             GAAGCCTAGAACTGCAAAAAGTCAAGAACTTTGTCGTCGAAAAATCAAGAATTTGATGGT
 
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JMSF021E08+           GCCATGCCAGCGAAGCGAACAGTAGAAGAGGGAGCTAAAATGGGAAGAGAGTGAAGGGCC
                      ____________________________________________________________
consensus             GCCATGCCAGCGAAGCGAACAGTAGAAGAGGGAGCTAAAATGGGAAGAGAGTGAAGGGCC