| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015H24 | Sequence | 586 | 003647 (6) | ref|XP_009606191.1| | 2e-25 | PREDICTED: nucleolar complex protein 2 homolog isoform X2 [Nicotiana tomentosif | 640 | 003985 (7) | ref|XP_010321097.1| | 1e-36 | PREDICTED: nucleolar complex protein 2 homolog isoform X2 [Solanum lycopersicum |
| JMFF017I22 | Sequence | 584 | 003647 (6) | ref|XP_009606191.1| | 1e-25 | PREDICTED: nucleolar complex protein 2 homolog isoform X2 [Nicotiana tomentosif | 773 | 003985 (7) | ref|XP_010321097.1| | 6e-63 | PREDICTED: nucleolar complex protein 2 homolog isoform X2 [Solanum lycopersicum |
| JMFF028E17 | Sequence | 502 | 003647 (6) | ref|XP_009606191.1| | 5e-19 | PREDICTED: nucleolar complex protein 2 homolog isoform X2 [Nicotiana tomentosif | 751 | 003985 (7) | ref|XP_010321097.1| | 2e-52 | PREDICTED: nucleolar complex protein 2 homolog isoform X2 [Solanum lycopersicum |
| JMFS069B02 | Sequence | 627 | 003647 (6) | ref|XP_009606191.1| | 3e-28 | PREDICTED: nucleolar complex protein 2 homolog isoform X2 [Nicotiana tomentosif | |||||
| JMSF019F19 | Sequence | 244 | 003647 (6) | 702 | 003985 (7) | ref|XP_010321097.1| | 2e-55 | PREDICTED: nucleolar complex protein 2 homolog isoform X2 [Solanum lycopersicum | |||
| JMSF023G13 | Sequence | 590 | 003647 (6) | ref|XP_009606191.1| | 1e-27 | PREDICTED: nucleolar complex protein 2 homolog isoform X2 [Nicotiana tomentosif | 781 | 003985 (7) | ref|XP_009758231.1| | 2e-85 | PREDICTED: nucleolar complex protein 2 homolog isoform X3 [Nicotiana sylvestris |
This contig is upended
. : . : . : . : . : . :
JMSF023G13+ TCCTTCACCAAGA
JMFS069B02+ AACAGCATCATTTAAAATTNNTCTGTTTCCTTCACCAAGA
____________________________________________________________
consensus AACAGCATCATTTAAAATTNNTCTGTTTCCTTCACCAAGA
. : . : . : . : . : . :
JMSF023G13+ TTGTCTTCATCTACAGAGTCAGTCACATTATTATTCATCTCATCTTCATCAGAGTCCGTT
JMFS069B02+ TTGTCTTCATCTACAGAGTCAGTCACATTATTATTCATCTCATCTTCATCAGAGTCCGTT
JMFF017I22+ TCTACAGAGTCAGTCACATTATTATTCATCTCATCTTCATCAGAGTCCGTT
JMFF015H24+ TCTACAGAGTCAGTCACATTATTATTCATCTCATCTTCATCAGAGTCCGTT
____________________________________________________________
consensus TTGTCTTCATCTACAGAGTCAGTCACATTATTATTCATCTCATCTTCATCAGAGTCCGTT
. : . : . : . : . : . :
JMSF023G13+ CCTCCGTTCTGATGCATTTCAACATCCTTGTACCTTTCTAAGAATTTGCAGAAATCTGGA
JMFS069B02+ CCTCCGTTCTGATGCATTTCAACATCCTTGTACCTTTCTAAGAATTTGCAGAAATCTGGA
JMFF017I22+ CCTCCGTTCTGATGCATTTCAACATCCTTGTACCTTTCTAAGAATTTGCAGAAATCTGGA
JMFF028E17+ ACCTTTCTAAGAATTTGCAGAAATCTGGA
JMFF015H24+ CCTCCGTTCTGATGCATTTCAACATCCTTGTACCTTTCTAAGAATTTGCAGAAATCTGGA
____________________________________________________________
consensus CCTCCGTTCTGATGCATTTCAACATCCTTGTACCTTTCTAAGAATTTGCAGAAATCTGGA
. : . : . : . : . : . :
JMSF023G13+ TTCTTCTTTTTCAGCCTTTCCAATTTCTTCTTTTTTACAGTAAGGTCTTCAAGAATTTTT
JMFS069B02+ TTCTTCTTTTTCAGCCTTTCCAATTTCTTCTTTTTTACAGTAAGGTCTTCAAGAATTTTT
JMFF017I22+ TTCTTCTTTTTCAGCCTTTCCAATTTCTTCTTTTTTACAGTAAGGTCTTCAAGAATTTTT
JMFF028E17+ TTCTTCTTTTTCAGCCTTTCCAATTTCTTCTTTTTTACAGTAAGGTCTTCAAGAATTTTT
JMFF015H24+ TTCTTCTTTTTCAGCCTTTCCAATTTCTTCTTTTTTACAGTAAGGTCTTCAAGAATTTTT
____________________________________________________________
consensus TTCTTCTTTTTCAGCCTTTCCAATTTCTTCTTTTTTACAGTAAGGTCTTCAAGAATTTTT
. : . : . : . : . : . :
JMSF023G13+ CTGTTTTCCATTGATAAGGAGCTAGCATCATTGTTATCTTCTAAAGCATTTCCAGGCTCA
JMFS069B02+ CTGTTTTCCATTGATAAGGAGCTAGCATCATTGTTATCTTCTAAAGCATTTCCAGGCTCA
JMFF017I22+ CTGTTTTCCATTGATAAGGAGCTAGCATCATTGTTATCTTCTAAAGCATTTCCAGGCTCA
JMFF028E17+ CTGTTTTCCATTGATAAGGAGCTAGCATCATTGTTATCTTCTAAAGCATTTCCAGGCTCA
JMFF015H24+ CTGTTTTCCATTGATAAGGAGCTAGCATCATTGTTATCTTCTAAAGCATTTCCAGGCTCA
____________________________________________________________
consensus CTGTTTTCCATTGATAAGGAGCTAGCATCATTGTTATCTTCTAAAGCATTTCCAGGCTCA
. : . : . : . : . : . :
JMSF023G13+ CTCTCTGTAGCATATTCACCAGTATTTTCCTCAGAAAGATATCCATCACTGTCCGAGGCA
JMFS069B02+ CTCTCTGTAGCATATTCACCAGTATTTTCCTCAGAAAGATATCCATCACTGTCCGAGGCA
JMFF017I22+ CTCTCTGTAGCATATTCACCAGTATTTTCCTCAGAAAGATATCCATCACTGTCCGAGGCA
JMFF028E17+ CTCTCTGTAGCATATTCACCAGTATTTTCCTCAGAAAGATATCCATCACTGTCCGAGGCA
JMFF015H24+ CTCTCTGTAGCATATTCACCAGTATTTTCCTCAGAAAGATATCCATCACTGTCCGAGGCA
____________________________________________________________
consensus CTCTCTGTAGCATATTCACCAGTATTTTCCTCAGAAAGATATCCATCACTGTCCGAGGCA
. : . : . : . : . : . :
JMSF023G13+ TCTTCAGCGATGTCAATCTCATCTTCAATGAATGCTGCATCAAGAGGAGTGTCTTCAAAA
JMFS069B02+ TCTTCAGCGATGTCAATCTCATCTTCAATGAATGCTGCATCAAGAGGAGTGTCTTCAAAA
JMFF017I22+ TCTTCAGCGATGTCAATCTCATCTTCAATGAATGCTGCATCAAGAGGAGTGTCTTCAAAA
JMFF028E17+ TCTTCAGCGATGTCAATCTCATCTTCAATGAATGCTGCATCAAGAGGAGTGTCTTCAAAA
JMFF015H24+ TCTTCAGCGATGTCAATCTCATCTTCAATGAATGCTGCATCAAGAGGAGTGTCTTCAAAA
JMSF019F19+ AAAA
____________________________________________________________
consensus TCTTCAGCGATGTCAATCTCATCTTCAATGAATGCTGCATCAAGAGGAGTGTCTTCAAAA
. : . : . : . : . : . :
JMSF023G13+ ACATCATCATGGGTGCTTCTTCCATTAGAGCGTTCTCTGGTACCGACTTTGTTTTCGGCA
JMFS069B02+ ACATCATCATGGGTGCTTCTTCCATTAGAGCGTTCTCTGGTACCGACTTTGTTTTCGGCA
JMFF017I22+ ACATCATCATGGGTGCTTCTTCCATTAGAGCGTTCTCTGGTACCGACTTTGTTTTCGGCA
JMFF028E17+ ACATCATCATGGGTGCTTCTTCCATTAGAGCGTTCTCTGGTACCGACTTTGTTTTCGGCA
JMFF015H24+ ACATCATCATGGGTGCTTCTTCCATTAGAGCGTTCTCTGGTACCGACTTTGTTTTCGGCA
JMSF019F19+ ACATCATCATGGGTGCTTCTTCCATTAGAGCGTTCTCTGGTACCGACTTTGTTTTCGGCA
____________________________________________________________
consensus ACATCATCATGGGTGCTTCTTCCATTAGAGCGTTCTCTGGTACCGACTTTGTTTTCGGCA
. : . : . : . : . : . :
JMSF023G13+ CTATTCTGCTCCTCTTTGGAAGATGATCTTTTCTTGAAAAGAACTTTGTTCTTCCGCTGT
JMFS069B02+ CTATTCTGCTCCTCTTTGGAAGATGATCTTTTCTTGAAAAGAACTTTGTTCTTCCGCTGT
JMFF017I22+ CTATTCTGCTCCTCTTTGGAAGATGATCTTTTCTTGAAAAGAACTTTGTTCTTCCGCTGT
JMFF028E17+ CTATTCTGCTCCTCTTTGGAAGATGATCTTTTCTTGAAAAGAACTTTGTTCTTCCGCTGT
JMFF015H24+ CTATTCTGCTCCTCTTTGGAAGATGATCTTTTCTTGAAAAGAACTTTGTTCTTCCGCTGT
JMSF019F19+ CTATTCTGCTCCTCTTTGGAAGATGATCTTTTCTTGAAAAGAACTTTGTTCTTCCGCTGT
____________________________________________________________
consensus CTATTCTGCTCCTCTTTGGAAGATGATCTTTTCTTGAAAAGAACTTTGTTCTTCCGCTGT
. : . : . : . : . : . :
JMSF023G13+ CTTCGATGCACGGATTGAAGATTCTTCTTTGCGAACTTCCTGGCCTTCTTCCCGAGCTTC
JMFS069B02+ CTTCGATGCACGGATTGAAGATTCTTCTTTGCGAACTTCCTGGCCTTCTTCCCGAGCTTC
JMFF017I22+ CTTCGATGCACGGATTGAAGATTCTTCTTTGCGAACTTCCTGGCCTTCTTCCCGAGCTTC
JMFF028E17+ CTTCGATGCACGGATTGAAGATTCTTCTTTGCGAACTTCCTGGCCTTCTTCCCGAGCTTC
JMFF015H24+ CTTCGATGCACGGATTGAAGATTCTTCTTTGCGAACTTCCTGGCCTTCTTCCCGAGCTTC
JMSF019F19+ CTTCGATGCACGGATTGAAGATTCTTCTTTGCGAACTTCCTGGCCTTCTTCCCGAGCTTC
____________________________________________________________
consensus CTTCGATGCACGGATTGAAGATTCTTCTTTGCGAACTTCCTGGCCTTCTTCCCGAGCTTC
. : . : . : . : . : . :
JMSF023G13+ TTCGCCATCGCCCGACAACCCGAGTAGAAGTCTAGAC
JMFS069B02+ TTCGCCATCGCCCGACAACCCGAGTAGAAGTCTAGACAAGGGTTTAA
JMFF017I22+ TTCGCCATCGCCCGACAACCCGAGTAGAAGTCTAGACAAGGGTTTAAGCTATC
JMFF028E17+ TTCGCCATCGCCCGACAACCCGAGTAGAAGTCTAGACAAGGGTTTAAGCTATC
JMFF015H24+ TTCGCCATCGCCCGACAACCCGAGTAGAAGTCTAGACAAGGGTTTAAGCTATC
JMSF019F19+ TTCGCCATCGCCCGACAACCCGAGTAGAAGTCTAGACAAGGGTTTAAGCTATCACGCTCC
____________________________________________________________
consensus TTCGCCATCGCCCGACAACCCGAGTAGAAGTCTAGACAAGGGTTTAAGCTATCACGCTCC