Contig 003642:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018K01Sequence476003642 (2)ref|XP_011097668.1|2e-24PREDICTED: F-box protein At-B isoform X1 [Sesamum indicum]716009949 (2)ref|XP_009601889.1|8e-60PREDICTED: F-box protein At-B [Nicotiana tomentosiformis]
JMSF048E16Sequence716003642 (2)ref|XP_011097668.1|2e-41PREDICTED: F-box protein At-B isoform X1 [Sesamum indicum]813009949 (2)ref|XP_006346066.1|1e-60PREDICTED: F-box protein At-B-like isoform X1 [Solanum tuberosum] ref|XP_0063460

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF048E16+ TTAAGTATGGAATGGATAAAATGCTGTTCATGCACTGGAAGTAACTTCAATGTTTT
                      ____________________________________________________________
consensus TTAAGTATGGAATGGATAAAATGCTGTTCATGCACTGGAAGTAACTTCAATGTTTT
 
. : . : . : . : . : . :
JMSF048E16+ GAGAGTTGTGGGTAGAGAATGGTAAAGATGTTGAAAATCATATACATCAACTGCAGTCCC
                      ____________________________________________________________
consensus GAGAGTTGTGGGTAGAGAATGGTAAAGATGTTGAAAATCATATACATCAACTGCAGTCCC
 
. : . : . : . : . : . :
JMSF048E16+ ATGAATTTTTAAAGATAGAGACTCCAGATAGGAAATGTTTTTAAGCATTACTACTAGGCT
                      ____________________________________________________________
consensus ATGAATTTTTAAAGATAGAGACTCCAGATAGGAAATGTTTTTAAGCATTACTACTAGGCT
 
. : . : . : . : . : . :
JMSF048E16+ CTTGATAAGTTGTGGTATTCTCTGCCATGCAATTTCAATTAAAAGGACCCTTAAGTTTGG
                      ____________________________________________________________
consensus CTTGATAAGTTGTGGTATTCTCTGCCATGCAATTTCAATTAAAAGGACCCTTAAGTTTGG
 
. : . : . : . : . : . :
JMSF048E16+ GCACCTATGCCCAATTGTACCAAGAATATGATGTGATCGTGAGGAACACTTGATCAAATT
JMSF018K01+ CTATGCCCAATTGTACCAAGAATATGATGTGATCGTGAGGAACACTTGATCAAATT
                      ____________________________________________________________
consensus GCACCTATGCCCAATTGTACCAAGAATATGATGTGATCGTGAGGAACACTTGATCAAATT
 
. : . : . : . : . : . :
JMSF048E16+ TAGTTCCTGGATTTGTGCTCCCAGGATGTTGATAAAAGAAAAATCATCCACACGAAGGCA
JMSF018K01+ TAGTTCCTGGATTTGTGCTCCCAGGATGTTGATAAAAGAAAAATCATCCACACGAAGGCA
                      ____________________________________________________________
consensus TAGTTCCTGGATTTGTGCTCCCAGGATGTTGATAAAAGAAAAATCATCCACACGAAGGCA
 
. : . : . : . : . : . :
JMSF048E16+ ATCAATGGTTAAGCTCTTGACCCCCTTGAGCCTACCTACAATACTTTGCAAAGTCTGGGA
JMSF018K01+ ATCAATGGTTAAGCTCTTGACCCCCTTGAGCCTACCTACAATACTTTGCAAAGTCTGGGA
                      ____________________________________________________________
consensus ATCAATGGTTAAGCTCTTGACCCCCTTGAGCCTACCTACAATACTTTGCAAAGTCTGGGA
 
. : . : . : . : . : . :
JMSF048E16+ GTCTGGATAAAATGCAGAGATATCGAGAGAGGAACGAGAAGCAAGAACTTGAGATGCAGC
JMSF018K01+ GTCTGGATAAAATGCAGAGATATCGAGAGAGGAACGAGAAGCAAGAACTTGAGATGCAGC
                      ____________________________________________________________
consensus GTCTGGATAAAATGCAGAGATATCGAGAGAGGAACGAGAAGCAAGAACTTGAGATGCAGC
 
. : . : . : . : . : . :
JMSF048E16+ GGAGCGGAGGGTCCGGGACACACAAGCTGCGGTGCAGAGAGATTCCAAGTCCAGCTTTAG
JMSF018K01+ GGAGCGGAGGGTCCGGGACACACAAGCTGCGGTGCAGAGAGATTCCAAGTCCAGCTTTAG
                      ____________________________________________________________
consensus GGAGCGGAGGGTCCGGGACACACAAGCTGCGGTGCAGAGAGATTCCAAGTCCAGCTTTAG
 
. : . : . : . : . : . :
JMSF048E16+ CAGAAGTTCGTTGATAATACTGTCCGGCAGCCTCTCCAACGACCAATGCGACCTTCCCCT
JMSF018K01+ CAGAAGTTCGTTGATAATACTGTCCGGCAGCCTCTCCAACGACCAATGCGACCTTCCCCT
                      ____________________________________________________________
consensus CAGAAGTTCGTTGATAATACTGTCCGGCAGCCTCTCCAACGACCAATGCGACCTTCCCCT
 
. : . : . : . : . : . :
JMSF048E16+ ACTCCCTTCCTCGCCGGGGAACTTATTTCCGGTCGCATCCATGAAATGAAATCAACCCCT
JMSF018K01+ ACTCCCTTCCTCGCCGGGGAACTTATTTCCGGTCGCATCCATGAAATGAAATCAACCCCT
                      ____________________________________________________________
consensus ACTCCCTTCCTCGCCGGGGAACTTATTTCCGGTCGCATCCATGAAATGAAATCAACCCCT
 
. : . : . : . : . : . :
JMSF048E16+ TTTCTCCTACAACTACAATCTATCTATTTGCTGCACAAAATGCCGCTTCCACGACTCTTC
JMSF018K01+ TTTCTCCTACAACTACAATCTATCTATTTGCTGCACAAAATGCCGCTTCCACGACTCTTC
                      ____________________________________________________________
consensus TTTCTCCTACAACTACAATCTATCTATTTGCTGCACAAAATGCCGCTTCCACGACTCTTC