Contig 003636:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003F11Sequence534003636 (5)gb|EYU37978.1|9e-65hypothetical protein MIMGU_mgv1a002825mg [Erythranthe guttata]738003988 (2)gb|AFW76484.1|3e-89putative ATPase, V1 complex, subunit B protein [Zea mays] gb|AFW86991.1| putativ
JMFF016A18Sequence555003636 (5)gb|EYU37978.1|4e-72hypothetical protein MIMGU_mgv1a002825mg [Erythranthe guttata]659003988 (2)ref|XP_008377719.1|1e-69PREDICTED: V-type proton ATPase subunit B 2-like [Malus domestica]
JMFF030I20Sequence388003636 (5)gb|EYU37978.1|2e-50hypothetical protein MIMGU_mgv1a002825mg [Erythranthe guttata]
JMSF004L13Sequence422003636 (5)gb|EYU37978.1|3e-50hypothetical protein MIMGU_mgv1a002825mg [Erythranthe guttata]
JMSF017L10Sequence582003636 (5)gb|EYU37978.1|1e-88hypothetical protein MIMGU_mgv1a002825mg [Erythranthe guttata]792024527gb|AFW76484.1|4e-100putative ATPase, V1 complex, subunit B protein [Zea mays] gb|AFW86991.1| putativ

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF016A18+ TTGAATCATTTCTTCAGGATAGGTTCTCTCACTGGGATTGATAGAACTTCCAGA
JMSF017L10+ CTTCAGGATAGGTTCTCTCACTGGGATTGATAGAACTTCCAGA
                      ____________________________________________________________
consensus TTGAATCATTTCTTCAGGATAGGTTCTCTCACTGGGATTGATAGAACTTCCAGA
 
. : . : . : . : . : . :
JMFF016A18+ AATGTCCAAGTAAGCCTCGGGAAGAATAGGAGGACCATTGTCAATTGGTTTCCCAGAACC
JMFF003F11+ TCCAAGTAAGCCTCGGGAAGAATAGGAGGACCATTGTCAATTGG-TTCCCAGAACC
JMSF017L10+ AATGTCCAAGTAAGCNTCGGGAAGAATAGGAGGACCATTGTCAATTGGTTTCCCAGAACC
                      ____________________________________________________________
consensus AATGTCCAAGTAAGCCTCGGGAAGAATAGGAGGACCATTGTCAATTGGTTTCCCAGAACC
 
. : . : . : . : . : . :
JMFF016A18+ ATTAAAAATGCGACCAAGCATATCCAAGGAGACTGGAGTTTTTAAAACCTCCCCAGTTAA
JMFF003F11+ ATTAAAAATGCGACCAAGCATATCCAAGGAGACTGGAGTTTTTAAAACCTCCCCAG-TAA
JMSF004L13+ AG-TAA
JMFF030I20+ AG-TAA
JMSF017L10+ ATTAAAAATGCGACCAAGCATATCCAAGGAGACTGGAGTTTTTAAAACCTCCCCAG-TAA
                      ____________________________________________________________
consensus ATTAAAAATGCGACCAAGCATATCCAAGGAGACTGGAGTTTTTAAAACCTCCCCAG-TAA
 
. : . : . : . : . : . :
JMFF016A18+ ATTGCACCGTTGTATATTTGTTGTCAATTCCAGAAGTTCCCTCAAAAACCTGAACAACAG
JMFF003F11+ ATTGCACCGTTGTATATTTGTTGTCAATTCCAGAAGTTCCCTCAAAAACCTGAACAACAG
JMSF004L13+ ATTGCACCGTNGTATATTTGTTGTCAATTCCAGAAGTTCCCTCAAAAACCTGAACAACAG
JMFF030I20+ ATTGCACCGTTGTATATTTGTTGTCAATTCCAGAAGTTCCCTCAAAAACCTGAACAACAG
JMSF017L10+ ATTGCACCGTTGTATATTTGTTGTCAATTCCAGAAGTTCCCTCAAAAACCTGAACAACAG
                      ____________________________________________________________
consensus ATTGCACCGTTGTATATTTGTTGTCAATTCCAGAAGTTCCCTCAAAAACCTGAACAACAG
 
. : . : . : . : . : . :
JMFF016A18+ CTTTCTCCCCATCGACTTCCAGAACTTGTCCACGTCGGGTAGTTCCATCACCTAAACGAA
JMFF003F11+ CTTTCTCCCCATCGACTTCCAGAACTTGTCCACGTCGGGTAGTTCCATCACCTAAACGAA
JMSF004L13+ CTTTCTCCCCATCGACTTCCAGAACTTGTCCACGTCGGGTAGTTCCATCACCTAAACGAA
JMFF030I20+ CTTTCTCCCCATCGACTTCCAGAACTTGTCCACGTCGGGTAGTTCCATCACCTAAACGAA
JMSF017L10+ CTTTCTCCCCATCGACTTCCAGAACTTGTCCACGTCGGGTAGTTCCATCACCTAAACGAA
                      ____________________________________________________________
consensus CTTTCTCCCCATCGACTTCCAGAACTTGTCCACGTCGGGTAGTTCCATCACCTAAACGAA
 
. : . : . : . : . : . :
JMFF016A18+ TATTAACAATCTCCTGGTACTTGGGTCCCTTGACTTTGTCAAGGATCACCAAAGGCCCTG
JMFF003F11+ TATTAACAATCTCCTGGTACTTGGGTCCCTTGACTTTGTCAAGGATCACCAAAGGCCCTG
JMSF004L13+ TATTAACAATCTCCTGGTACTTGGGTCCCTTGACTTTGTCAAGGATCACCAAAGGCCCTG
JMFF030I20+ TATTAACAATCTCCTGGTACTTGGGTCCCTTGACTTTGTCAAGGATCACCAAAGGCCCTG
JMSF017L10+ TATTAACAATCTCCTGGTACTTGGGTCCCTTGACTTTGTCAAGGATCACCAAAGGCCCTG
                      ____________________________________________________________
consensus TATTAACAATCTCCTGGTACTTGGGTCCCTTGACTTTGTCAAGGATCACCAAAGGCCCTG
 
. : . : . : . : . : . :
JMFF016A18+ CAACTCCAGAAACAGTTCTATATTCCATGCCAATCTCCAGAGTTCCCTCCTCCATGTCAA
JMFF003F11+ CAACTCCAGAAACAGTTCTATATTCCATGCCAATCTCCAGAGTTCCCTCCTCCATGTCAA
JMSF004L13+ CAACTCCAGAAACAGTTCTATATTCCATGCCAATCTCCAGAGTTCCCTCCTCCATGTCAA
JMFF030I20+ CAACTCCAGAAACAGTTCTATATTCCATGCCAATCTCCAGAGTTCCCTCCTCCATGTCAA
JMSF017L10+ CAACTCCAGAAACAGTTCTATATTCCATGCCAATCTCCAGAGTTCCCTCCTCCATGTCAA
                      ____________________________________________________________
consensus CAACTCCAGAAACAGTTCTATATTCCATGCCAATCTCCAGAGTTCCCTCCTCCATGTCAA
 
. : . : . : . : . : . :
JMFF016A18+ TACCATTTTGAGCCGGCATGTTTTGAACTCTCTGGTTCGTTATCCTGAAATCCGGCAGAA
JMFF003F11+ TACCATTTTGAGCCGGCATGTTTTGAACTCTCTGGTTCGTTATCCTGAAATCCGGCAGAA
JMSF004L13+ TACCATTTTGAGCCGGCATGTTTTGAACTCTCTGGTTCGTTATCCTGAAATCCGGCAGAA
JMFF030I20+ TACCATTTTGAGCCGGCATGTTTTGAACTCTCTGGTTCGTTATCCTGAAATCCGGCAGAA
JMSF017L10+ TACCATTTTGAGCCGGCATGTTTTGAACTCTCTGGTTCGTTATCCTGAAATCCGGCAGAA
                      ____________________________________________________________
consensus TACCATTTTGAGCCGGCATGTTTTGAACTCTCTGGTTCGTTATCCTGAAATCCGGCAGAA
 
. : . : . : . : . : . :
JMFF016A18+ GAAGACAATAGCAGAGTCGCTGAGACAACGGTGGAGCGTGGAGAAACGAAGCTGAGATCT
JMFF003F11+ GAAGACAATAGCAGAGTCGCTGAGACAACGGTGGAGCGTGGAGAAACGAAGCTGAGATCT
JMSF004L13+ GAAGACAATAGCAGAGTCGCTGAGACAACGGTGGAGCGTGGAGAAACGAAGCTGAGATCT
JMFF030I20+ GAAGACAATAGCAGAGTCGCTGAGACAACGGTGGAGCGTGGAGAAACGAAGCTGAGATCT
JMSF017L10+ GAAGACAATAGCAGAGTCGCTGAGACAACGGTGGAGCGTGGAGAAACGAAGCTGAGATCT
                      ____________________________________________________________
consensus GAAGACAATAGCAGAGTCGCTGAGACAACGGTGGAGCGTGGAGAAACGAAGCTGAGATCT
 
. : . : . : . : . : . :
JMFF016A18+ AATGGGACAGGGAAGGAAGGT
JMFF003F11+ AATGGGACAGGGAAGGAAGGTGTTCGGCAAGTAAATTTCCTTTGTATCTATAAGAC
JMSF004L13+ AATGGGACAGGGAAGGAAGGTGTTCGGCAAGTAAATTTCCTTTGTATCTATAAGAC
JMFF030I20+ AATGGGACAGGGAAGGAAGGT
JMSF017L10+ AATGGGACAGGGAAGGAAGGTGTTCGGCAAGTAAATTTCCTTTGTATCTATAAGACGCCC
                      ____________________________________________________________
consensus AATGGGACAGGGAAGGAAGGTGTTCGGCAAGTAAATTTCCTTTGTATCTATAAGACGCCC