Contig 003635:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN004M15Sequence566003635 (8)ref|XP_004228682.1|218PREDICTED: uncharacterized protein LOC101264357 [Solanum lycopersicum]
JMFN004O17Sequence624003635 (8)ref|XP_004228682.1|262PREDICTED: uncharacterized protein LOC101264357 [Solanum lycopersicum]
JMSF016K23Sequence288003635 (8)ref|XP_004228682.1|48.5PREDICTED: uncharacterized protein LOC101264357 [Solanum lycopersicum]751003635 (8)ref|XP_004228682.1|345PREDICTED: uncharacterized protein LOC101264357 [Solanum lycopersicum]
JMSF017K23Sequence322003635 (8)ref|XP_004228682.1|67.0PREDICTED: uncharacterized protein LOC101264357 [Solanum lycopersicum]744003635 (8)ref|XP_004228682.1|345PREDICTED: uncharacterized protein LOC101264357 [Solanum lycopersicum]
JMSF033J11Sequence596003635 (8)ref|XP_004228682.1|230PREDICTED: uncharacterized protein LOC101264357 [Solanum lycopersicum]722003635 (8)ref|XP_009620471.1|328PREDICTED: uncharacterized protein LOC104112297 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF033J11- AGATAGTTAACATCCCCAAAT
rJMSF016K23- AAT
rJMSF017K23- AAT
                      ____________________________________________________________
consensus AGATAGTTAACATCCCCAAAT
 
. : . : . : . : . : . :
rJMSF033J11- TGTATACTGGTTAAAGGGTTTTGATGCTAGATATGGATATATACAGAGTGATTCAAATGA
rJMSF016K23- TGTATACTGGTTAAAGGGTTTTGATGCTAGATATGGATATATACAGAGTGATTCAAATGA
rJMSF017K23- TGTATACTGGTTAAAGGGTTTTGATGCTAGATATGGATATATACAGAGTGATTCAAATGA
                      ____________________________________________________________
consensus TGTATACTGGTTAAAGGGTTTTGATGCTAGATATGGATATATACAGAGTGATTCAAATGA
 
. : . : . : . : . : . :
rJMSF033J11- ACAGTACACACCAAAGAGTTTTAACACAGTGGTTGTTCTTCAAACAGAAGGGCCGGATCT
rJMSF016K23- ACAGTACACACCAAAGAGTTTTAACACAGTGGTTGTTCTTCAAACAGAAGGGCCGGATCT
rJMSF017K23- ACAGTACACACCAAAGAGTTTTAACACAGTGGTTGTTCTTCAAACAGAAGGGCCGGATCT
                      ____________________________________________________________
consensus ACAGTACACACCAAAGAGTTTTAACACAGTGGTTGTTCTTCAAACAGAAGGGCCGGATCT
 
. : . : . : . : . : . :
rJMSF033J11- CAGGACCCTCTCCACTTTCTCGGCTTTGGTATAGTCGTTTTCTGTTAGAGGTCCAGCAGG
rJMSF016K23- CAGGACCCTCTCCACTTTCTCGGCTTTGGTATAGTCGTTTTCTGTTAGAGGTCCAGCAGG
rJMSF017K23- CAGGACCCTCTCCACTTTCTCGGCTTTGGTATAGTCGTTTTCTGTTAGAGGTCCAGCAGG
                      ____________________________________________________________
consensus CAGGACCCTCTCCACTTTCTCGGCTTTGGTATAGTCGTTTTCTGTTAGAGGTCCAGCAGG
 
. : . : . : . : . : . :
rJMSF033J11- GAAAGGCGTGATCTCTACAATTAGGTGCGGGGTTGGGAGCTCATCGAACAGAGCTCTCAC
rJMSF016K23- GAAAGGCGTGATCTCTACAATTAGGTGCGGGGTTGGGAGCTCATCGAACAGAGCTCTCAC
rJMSF017K23- GAAAGGCGTGATCTCTACAATTAGGTGCGGGGTTGGGAGCTCATCGAACAGAGCTCTCAC
JMFN004O17+ C
                      ____________________________________________________________
consensus GAAAGGCGTGATCTCTACAATTAGGTGCGGGGTTGGGAGCTCATCGAACAGAGCTCTCAC
 
. : . : . : . : . : . :
rJMSF033J11- GTTATTGCAACACACGCTTTCTCCGTGAGCACTCTCCCTCCTTATCTGACAACCCTTGTG
rJMSF016K23- GTTATTGCAACACACGCTTTCTCCGTGAGCACTCTCCCTCCTTATCTGACAACCCTTGTG
rJMSF017K23- GTTATTGCAACACACGCTTTCTCCGTGAGCACTCTCCCTCCTTATCTGACAACCCTTGTG
JMFN004M15+ GTG
JMFN004O17+ GTTATTGCAACACACGCTTTCTCCGTGAGCACTCTCCCTCCTTATCTGACAACCCTTGTG
JMSF033J11+ TTATCTGACAACCCTTGTG
                      ____________________________________________________________
consensus GTTATTGCAACACACGCTTTCTCCGTGAGCACTCTCCCTCCTTATCTGACAACCCTTGTG
 
. : . : . : . : . : . :
rJMSF033J11- AGAAGTGGCATCTCTAAAATGGTCATCATCTGATAGTAAGGAAGCAACGGCTCTGAGAAG
rJMSF016K23- AGAAGTGGCATCTCTAAAATGGTCATCATCTGATAGTAAGGAAGCAACGGCTCTGAGAAG
rJMSF017K23- AGAAGTGGCATCTCTAAAATGGTCATCATCTGATAGTAAGGAAGCAACGGCTCTGAGAAG
JMFN004M15+ AGAAGTGGCATCTCTAAAATGGTCATCATCTGATAGTAAGGAAGCAACGGCTCTGAGAAG
JMFN004O17+ AGAAGTGGCATCTCTAAAATGGTCATCATCTGATAGTAAGGAAGCAACGGCTCTGAGAAG
JMSF033J11+ AGAAGTGGCATCTCTAAAATGGTCATCATCTGATAGTAAGGAAGCAACGGCTCTGAGAAG
                      ____________________________________________________________
consensus AGAAGTGGCATCTCTAAAATGGTCATCATCTGATAGTAAGGAAGCAACGGCTCTGAGAAG
 
. : . : . : . : . : . :
rJMSF033J11- GCGTTTCCCTTCAGATTTTGATGGGATCCGGTAATTGCGTCTGAGGGTCCCCTTAGTTGT
rJMSF016K23- GCGTTTCCCTTCAGATTTTGATGGGATCCGGTAATTGCGTCTGAGGGTCCCCTTAGTTGT
rJMSF017K23- GCGTTTCCCTTCAGATTTTGATGGGATCCGGTAATTGCGTCTGAGGGTCCCCTTAGTTGT
JMFN004M15+ GCGTTTCCCTTCAGATTTTGATGGGATCCGGTAATTGCGTCTGAGGGTCCCCTTAGTTGT
JMFN004O17+ GCGTTTCCCTTCAGATTTTGATGGGATCCGGTAATTGCGTCTGAGGGTCCCCTTAGTTGT
JMSF033J11+ GCGTTTCCCTTCAGATTTTGATGGGATCCGGTAATTGCGTCTGAGGGTCCCCTTAGTTGT
                      ____________________________________________________________
consensus GCGTTTCCCTTCAGATTTTGATGGGATCCGGTAATTGCGTCTGAGGGTCCCCTTAGTTGT
 
. : . : . : . : . : . :
rJMSF033J11- TGGATGCCATTTGCTTACTAATTTCCTTCTGTCAGCAGCTTCCCTATCTGGATTTCTTTT
rJMSF016K23- TGGATGCCATTTGCTTACTAATTTCCTTCTGTCAGCAGCTTCCCTATCTGGATTTCTTTT
rJMSF017K23- TGGATGCCATTTGCTTACTAATTTCCTTCTGTCAGCAGCTTCCCTATCTGGATTTCTTTT
JMFN004M15+ TGGATGCCATTTGCTTACTAATTTCCTTCTGTCAGCAGCTTCCCTATCTGGATTTCTTTT
JMFN004O17+ TGGATGCCATTTGCTTACTAATTTCCTTCTGTCAGCAGCTTCCCTATCTGGATTTCTTTT
JMSF033J11+ TGGATGCCATTTGCTTACTAATTTCCTTCTGTCAGCAGCTTCCCTATCTGGATTTCTTTT
                      ____________________________________________________________
consensus TGGATGCCATTTGCTTACTAATTTCCTTCTGTCAGCAGCTTCCCTATCTGGATTTCTTTT
 
. : . : . : . : . : . :
rJMSF033J11- GAACTGATCAAACCAATTAGCAAGACCCAAATCATCAGCCTCAGCATTCTCAAAATCTGA
rJMSF016K23- GAACTGATCAAACCAATTAGCAAGACCCAAATCATCAGCCTCAGCATTCTCAAAATCTGA
rJMSF017K23- GAACTGATCAAACCAATTAGCAAGACCCAAATCATCAGCCTCAGCATTCTCAAAATCTGA
JMFN004M15+ GAACTGATCAAACCAATTAGCAAGACCCAAATCATCAGCCTCAGCATTCTCAAAATCTGA
JMFN004O17+ GAACTGATCAAACCAATTAGCAAGACCCAAATCATCAGCCTCAGCATTCTCAAAATCTGA
JMSF033J11+ GAACTGATCAAACCAATTAGCAAGACCCAAATCATCAGCCTCAGCATTCTCAAAATCTGA
                      ____________________________________________________________
consensus GAACTGATCAAACCAATTAGCAAGACCCAAATCATCAGCCTCAGCATTCTCAAAATCTGA
 
. : . : . : . : . : . :
rJMSF033J11- AAGAATGGGGTTAGAAGGAGATCCAGCCAAGCCAGCTTTGAGGAGGGCATAGAAGATGGC
rJMSF016K23- AAGAATGGGGTTAGAAGGAGATCCAGCCAAGCCAGCTTTGAGGAGGGCATAGAAGATGGC
rJMSF017K23- AAGAATGGGGTTAGAAGGAGATCCAGCCAAGCCAGCTTTGAGGAGGGCATAGAAGATGGC
JMFN004M15+ AAGAATGGGGTTAGAAGGAGATCCAGCCAAGCCAGCTTTGAGGAGGGCATAGAAGATGGC
JMFN004O17+ AAGAATGGGGTTAGAAGGAGATCCAGCCAAGCCAGCTTTGAGGAGGGCATAGAAGATGGC
JMSF033J11+ AAGAATGGGGTTAGAAGGAGATCCAGCCAAGCCAGCTTTGAGGAGGGCATAGAAGATGGC
JMSF017K23+ TGAGGAGGGCATAGAAGATGGC
                      ____________________________________________________________
consensus AAGAATGGGGTTAGAAGGAGATCCAGCCAAGCCAGCTTTGAGGAGGGCATAGAAGATGGC
 
. : . : . : . : . : . :
rJMSF033J11- AACTCTTCCAGCCCACAACACTGGGGTCTCAAACAGAGTGGCCCGAGTTGTTGTTTTGGC
rJMSF016K23- AACTCTTCCAGCCCACAACACTGGGGTCTCAAACAGAGTGGCCCGAGTTGTTGTTTTGGC
rJMSF017K23- AACTCTTCCAGCCCACAACACTGGGGTCTCAAACAGAGTGGCCCGAGTTGTTGTTTTGGC
JMFN004M15+ AACTCTTCCAGCCCACAACACTGGGGTCTCAAACAGAGTGGCCCGAGTTGTTGTTTTGGC
JMFN004O17+ AACTCTTCCAGCCCACAACACTGGGGTCTCAAACAGAGTGGCCCGAGTTGTTGTTTTGGC
JMSF033J11+ AACTCTTCCAGCCCACAACACTGGGGTCTCAAACAGAGTGGCCCGAGTTGTTGTTTTGGC
JMSF016K23+ CCACAACACTGGGGTCTCAAACAGAGTGGCCCGAGTTGTTGTTTTGGC
JMSF017K23+ AACTCTTCCAGCCCACAACACTGGGGTCTCAAACAGAGTGGCCCGAGTTGTTGTTTTGGC
                      ____________________________________________________________
consensus AACTCTTCCAGCCCACAACACTGGGGTCTCAAACAGAGTGGCCCGAGTTGTTGTTTTGGC
 
. : . : . : . : . : . :
rJMSF033J11- AGTAAAAATTGAGGCCTTTCTGGGACTGCTGCCCAAATGAA
rJMSF016K23- AGTAAAAATTGAGGCCTTTCTGGGACTGCTGCCCAAATGAAACCTCAAATCAAGACTGGG
rJMSF017K23- AGTAAAAATTGAGGCCTTTCTGGGACTGCTGCCCAAATGAAACCTCAAATCAAGACTGGG
JMFN004M15+ AGTAAAAATTGAGGCCTTTCTGGGACTGCTGCCCAAATGAAACCTCAAATCAAGACTGGG
JMFN004O17+ AGTAAAAATTGAGGCCTTTCTGGGACTGCTGCCCAAATGAAACCTCAAATCAAGACTGGG
JMSF033J11+ AGTAAAAATTGAGGCCTTTCTGGGACTGCTGCCCAAATGAAACCTCAAATCAAGACTGGG
JMSF016K23+ AGTAAAAATTGAGGCCTTTCTGGGACTGCTGCCCAAATGAAACCTCAAATCAAGACTGGG
JMSF017K23+ AGTAAAAATTGAGGCCTTTCTGGGACTGCTGCCCAAATGAAACCTCAAATCAAGACTGGG
                      ____________________________________________________________
consensus AGTAAAAATTGAGGCCTTTCTGGGACTGCTGCCCAAATGAAACCTCAAATCAAGACTGGG
 
. : . : . : . : . : . :
rJMSF016K23- AAACAAAGACTTTGGCAGCA
rJMSF017K23- AAACAAAGACTTTGGCAGCA
JMFN004M15+ AAACAAAGACTTTGGCAGCAGAAAAGCAGTGTGATGCTTGAAGCAAGAAGAGGGTAGGGT
JMFN004O17+ AAACAAAGACTTTGGCAGCAGAAAAGCAGTGTGATGCTTGAAGCAAGAAGAGGGTAGGGT
JMSF033J11+ AAACAAAGACTTTGGCAGCAGAAAAGCAGTGTGATGCTTGAAGCAAGAAGAGGGTAGGGT
JMSF016K23+ AAACAAAGACTTTGGCAGCAGAAAAGCAGTGTGATGCTTGAAGCAAGAAGAGGGTAGGGT
JMSF017K23+ AAACAAAGACTTTGGCAGCAGAAAAGCAGTGTGATGCTTGAAGCAAGAAGAGGGTAGGGT
                      ____________________________________________________________
consensus AAACAAAGACTTTGGCAGCAGAAAAGCAGTGTGATGCTTGAAGCAAGAAGAGGGTAGGGT
 
. : . : . : . : . : . :
JMFN004M15+ TTGGATGGCGCTTTGTAGAAGAAGCATTTGGTTTGATTGGATTTCTTCGCAGAATCAAAG
JMFN004O17+ TTGGATGGCGCTTTGTAGAAGAAGCATTTGGTTTGATTGGATTTCTTCGCAGAATCAAAG
JMSF033J11+ TTGGATGGCGCTTTGTAGAAGAAGCATTTGGTTTGATTGGATTTCTTCGCAGAATCAAAG
JMSF016K23+ TTGGATGGCGCTTTGTAGAAGAAGCATTTGGTTTGATTGGATTTCTTCGCAGAATCAAAG
JMSF017K23+ TTGGATGGCGCTTTGTAGAAGAAGCATTTGGTTTGATTGGATTTCTTCGCAGAATCAAAG
                      ____________________________________________________________
consensus TTGGATGGCGCTTTGTAGAAGAAGCATTTGGTTTGATTGGATTTCTTCGCAGAATCAAAG
 
. : . : . : . : . : . :
JMFN004M15+ AAAATAGCGCAGTTTTTTCAGTG
JMFN004O17+ AAAATAGCGCAGTTTTTTCAGTG
JMSF033J11+ AAAATAGCGCAGTTTTTTCAGTGTATGAGATAGATT
JMSF016K23+ AAAATAGCGCAGTTTTTTCAGTGTATGAGATAGATTAGATCCCTTACAGTTCAGCCAGTC
JMSF017K23+ AAAATAGCGCAGTTTTTTCAGTGTATGAGATAGATTAGATCCCTTACAGTTCAGCCAGTC
                      ____________________________________________________________
consensus AAAATAGCGCAGTTTTTTCAGTGTATGAGATAGATTAGATCCCTTACAGTTCAGCCAGTC