clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF026K16 | Sequence | 467 | 003631 (2) | ref|XP_009370170.1| | 3e-35 | PREDICTED: serine carboxypeptidase II-3-like isoform X2 [Pyrus x bretschneideri | 658 | 009706 (3) | ref|XP_006434837.1| | 3e-49 | hypothetical protein CICLE_v10003343mg, partial [Citrus clementina] gb|ESR48077. |
JMSF017D02 | Sequence | 421 | 003631 (2) | ref|XP_009370170.1| | 5e-20 | PREDICTED: serine carboxypeptidase II-3-like isoform X2 [Pyrus x bretschneideri | 726 | 009706 (3) | ref|XP_006434837.1| | 6e-74 | hypothetical protein CICLE_v10003343mg, partial [Citrus clementina] gb|ESR48077. |
This contig is upended
. : . : . : . : . : . :
JMFF026K16+ TCTAAATGGCCCCAGTTCCATGAAA
____________________________________________________________
consensus TCTAAATGGCCCCAGTTCCATGAAA
. : . : . : . : . : . :
JMFF026K16+ GCGCCACCACCAACGGAAGAATAAGCCGGTCCACCATTAAGCCACAAAACAAGGGGTTTA
JMSF017D02+ A
____________________________________________________________
consensus GCGCCACCACCAACGGAAGAATAAGCCGGTCCACCATTAAGCCACAAAACAAGGGGTTTA
. : . : . : . : . : . :
JMFF026K16+ GAAGAAGGTTCTTGAGGTGACTCGACAAAGTAATAGAACAAGGCTCGTCCGGCGGCTTCG
JMSF017D02+ GAAGAAGGTTCTTGAGGTGACTCGACAAAGTAATAGAACAAGGCTCGTCCGGCGGCTTCG
____________________________________________________________
consensus GAAGAAGGTTCTTGAGGTGACTCGACAAAGTAATAGAACAAGGCTCGTCCGGCGGCTTCG
. : . : . : . : . : . :
JMFF026K16+ TCCACCGTAACATGCCCGGCGTATTGGTCGAAATCTGCTCCGGTGGGCTGTCCCGGCAGC
JMSF017D02+ TCCACCGTAACATGCCCGGCGTATTGGTCGAAATCTGCTCCGGTGGGCTGTCCCGGCAGC
____________________________________________________________
consensus TCCACCGTAACATGCCCGGCGTATTGGTCGAAATCTGCTCCGGTGGGCTGTCCCGGCAGC
. : . : . : . : . : . :
JMFF026K16+ CTCTGAATCCGGTTGCTCTCCTTGAGTCCATCTTGACGCCCAGTGTACACCGGAAAGTAC
JMSF017D02+ CTCTGAATCCGGTTGCTCTCCTTGAGTCCATCTTGACGCCCAGTGTACACCGGAAAGTAC
____________________________________________________________
consensus CTCTGAATCCGGTTGCTCTCCTTGAGTCCATCTTGACGCCCAGTGTACACCGGAAAGTAC
. : . : . : . : . : . :
JMFF026K16+ GGCGGCTCCGACGAAGAATAGCTGAGTTGTCTTTGATGATGATGATCGGCCGGCGAATCC
JMSF017D02+ GGCGGCTCCGACGAAGAATAGNTGAGTTGTCTTTGATGATGATGATCGGCCGGCGAATCC
____________________________________________________________
consensus GGCGGCTCCGACGAAGAATAGCTGAGTTGTCTTTGATGATGATGATCGGCCGGCGAATCC
. : . : . : . : . : . :
JMFF026K16+ AAACCTTTAACTCTGCCGCACTGGACAGAAACCACTAGACAGAATAGGAAACAGATGAAG
JMSF017D02+ AAACCTTTAACTCTGCCGCACTGGACAGAAACCACTAGACAGAATAGGAAACAGATGAAG
____________________________________________________________
consensus AAACCTTTAACTCTGCCGCACTGGACAGAAACCACTAGACAGAATAGGAAACAGATGAAG
. : . : . : . : . : . :
JMFF026K16+ CACAAGGGAAGAGAAATAACGTTCGCCATTATAGTGTCACCTAGCTAGCTCCCGGTGTTA
JMSF017D02+ CACAAGGGAAGAGAAATAACGTTCGCCATTATAGTGTCACCTAGCTAGCTCCCGGTGTTA
____________________________________________________________
consensus CACAAGGGAAGAGAAATAACGTTCGCCATTATAGTGTCACCTAGCTAGCTCCCGGTGTTA
. : . : . : . : . : . :
JMFF026K16+ TCAGTCACCATTTCTTGAAATT
JMSF017D02+ TCAGTCACCATTTCTTGAAATTAATGTCAGATGAATTCTCTATTGTTTAAGATAATAACC
____________________________________________________________
consensus TCAGTCACCATTTCTTGAAATTAATGTCAGATGAATTCTCTATTGTTTAAGATAATAACC