Contig 003626:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN014H04Sequence615003626 (3)ref|XP_009618547.1|2e-24PREDICTED: mediator-associated protein 2 [Nicotiana tomentosiformis]
JMSF016L18Sequence478003626 (3)ref|XP_011069352.1|2e-47PREDICTED: mediator-associated protein 2-like isoform X2 [Sesamum indicum] ref|769003626 (3)ref|XP_011069352.1|6e-55PREDICTED: mediator-associated protein 2-like isoform X2 [Sesamum indicum] ref|

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN014H04+ TCAAAGCTCTACATAATAATCTAGACAAACCGGTGAGTCATTTTAATATTC
rJMSF016L18- AAGCTCTACATAATAATCTAGACAAACCGGTGAGTCATTTTAATATTC
                      ____________________________________________________________
consensus TCAAAGCTCTACATAATAATCTAGACAAACCGGTGAGTCATTTTAATATTC
 
. : . : . : . : . : . :
JMFN014H04+ CGTATGATCTTCCTCAAAATTGTGCATCAAGATTGAAACAAGATCTGATAAATGGAAGCT
rJMSF016L18- CGTATGATCTTCCTCAAAATTGTGCATCAAGATTGAAACAAGATCTGATAAATGGAAGCT
                      ____________________________________________________________
consensus CGTATGATCTTCCTCAAAATTGTGCATCAAGATTGAAACAAGATCTGATAAATGGAAGCT
 
. : . : . : . : . : . :
JMFN014H04+ GCTATAACAGTTTGAAGATTCAATTAGCCCTCGACTTTTTTGCTTTTCTTTCTTGAGAAT
rJMSF016L18- GCTATAACAGTTTGAAGATTCAATTAGCCCTCGAC-TTTTTGCTTTTCTTTCTTGAGAAT
                      ____________________________________________________________
consensus GCTATAACAGTTTGAAGATTCAATTAGCCCTCGACTTTTTTGCTTTTCTTTCTTGAGAAT
 
. : . : . : . : . : . :
JMFN014H04+ GCCCCGCTGATCCAGAACTGGTAACTGCACTGTTGGCTCTGCCAGAATCCTGCACAGACT
rJMSF016L18- GCCCCGCTGATCCAGAACTGGTAACTGCACTGTTGGCTCTGCCAGAATCCTGCACAGACT
                      ____________________________________________________________
consensus GCCCCGCTGATCCAGAACTGGTAACTGCACTGTTGGCTCTGCCAGAATCCTGCACAGACT
 
. : . : . : . : . : . :
JMFN014H04+ GGTCCATGGACTTTGAAGACTCACCGTGGCTTCTTTTCTTTGGAGTCTTAGATGGCTCAC
rJMSF016L18- GGTCCATGGACTTTGAAGACTCACCGTGGCTTCTTTTCTTTGGAGTCTTAGATGGCTCAC
                      ____________________________________________________________
consensus GGTCCATGGACTTTGAAGACTCACCGTGGCTTCTTTTCTTTGGAGTCTTAGATGGCTCAC
 
. : . : . : . : . : . :
JMFN014H04+ CCAATTTGGATTTGGAACTTTTCTGTTGGCTACTAGGAGTGTTGGTAGTGTAGATACTCG
rJMSF016L18- CCAATTTGGATTTGGAACTTTTCTGTTGGCTACTAGGAGTGTTGGTAGTGTAGATACTCG
                      ____________________________________________________________
consensus CCAATTTGGATTTGGAACTTTTCTGTTGGCTACTAGGAGTGTTGGTAGTGTAGATACTCG
 
. : . : . : . : . : . :
JMFN014H04+ TAGATTGTGAACTTCTATGCTTACTACTTTTAGTAGCACTTGAAGAATGGAAAACTGAAC
rJMSF016L18- TAGATTGTGAACTTCTATGCTTACTACTTTTAGTAGCACTTGAAGAATGGAAAACTGAAC
                      ____________________________________________________________
consensus TAGATTGTGAACTTCTATGCTTACTACTTTTAGTAGCACTTGAAGAATGGAAAACTGAAC
 
. : . : . : . : . : . :
JMFN014H04+ TTGTCTTTGTCATCGTTGAAGACCTCTGAGCTATCTCCTTCAAACTCATTTTGTTGTGTT
rJMSF016L18- TTGTCTTTGTCATCGTTGAAGACCTCTGAGCTATCTCCTTCAAACTCATTTTGTTGTGTT
                      ____________________________________________________________
consensus TTGTCTTTGTCATCGTTGAAGACCTCTGAGCTATCTCCTTCAAACTCATTTTGTTGTGTT
 
. : . : . : . : . : . :
JMFN014H04+ TCTGAAATTCACTAGGCTCTGGATAGTGAATAAAAGAAACATGGCGCGAAATCTTTCCAA
rJMSF016L18- TCTGAAATTCACTAGGCTCTGGATAGTGAATAAAAGAAACATGGCGCGAAATCTTTCCAA
JMSF016L18+ TGAAATTCACTAGGCTCTGGATAGTGAATAAAAGAAACATGGCGCGAAATCTTTCCAA
                      ____________________________________________________________
consensus TCTGAAATTCACTAGGCTCTGGATAGTGAATAAAAGAAACATGGCGCGAAATCTTTCCAA
 
. : . : . : . : . : . :
JMFN014H04+ CAGCTTTTGCCTCTGATGCAGAAGATAGAAATACCGTTCCAACTGGATCCTGGGCTTTTA
rJMSF016L18- CAGCTTTTGCCTCTGATGCAGAAGATAGAAATACCGTTCCAACTGGATCCTGGGCTTTTA
JMSF016L18+ CAGCTTTTGCCTCTGATGCAGAAGATAGAAATACCGTTCCAACTGGATCCTGGGCTTTTA
                      ____________________________________________________________
consensus CAGCTTTTGCCTCTGATGCAGAAGATAGAAATACCGTTCCAACTGGATCCTGGGCTTTTA
 
. : . : . : . : . : . :
JMFN014H04+ AATTGAAAACATCATAAGATTTTC
rJMSF016L18- AATTGAAAACATCATAAGATTTTCCAGAAGAACTCTCAAAGCTGCCTAAATGCCCCTCAT
JMSF016L18+ AATTGAAAACATCATAAGATTTTCCAGAAGAACTCTCAAAGCTGCCTAAATGCCCCTCAT
                      ____________________________________________________________
consensus AATTGAAAACATCATAAGATTTTCCAGAAGAACTCTCAAAGCTGCCTAAATGCCCCTCAT
 
. : . : . : . : . : . :
rJMSF016L18- TATCAAGTTTCAGTGACACTTGCCCATCAAAATCTGAAGAATGATTTTGGGGCCATTGGA
JMSF016L18+ TATCAAGTTTCAGTGACACTTGCCCATCAAAATCTGAAGAATGATTTTGGGGCCATTGGA
                      ____________________________________________________________
consensus TATCAAGTTTCAGTGACACTTGCCCATCAAAATCTGAAGAATGATTTTGGGGCCATTGGA
 
. : . : . : . : . : . :
rJMSF016L18- TGAGCCAGAGCTCAGTTGAATCCGTTAATTTAAGTTCAACAAGTGGATCTCTTTTATCCT
JMSF016L18+ TGAGCCAGAGCTCAGTTGAATCCGTTAATTTAAGTTCAACAAGTGGATCTCTTTTATCCT
                      ____________________________________________________________
consensus TGAGCCAGAGCTCAGTTGAATCCGTTAATTTAAGTTCAACAAGTGGATCTCTTTTATCCT
 
. : . : . : . : . : . :
rJMSF016L18- CC
JMSF016L18+ CCACAAAATCAGAAGGAGGTTTGTAACCCAATTCATTAGCAACATCCATTTGCTAACCAG
                      ____________________________________________________________
consensus CCACAAAATCAGAAGGAGGTTTGTAACCCAATTCATTAGCAACATCCATTTGCTAACCAG
 
. : . : . : . : . : . :
JMSF016L18+ GAGACACCACAGATAATCCTGAACCACAGCCGGCTACTGCCGGAGTGACGGACGGAGACA
                      ____________________________________________________________
consensus GAGACACCACAGATAATCCTGAACCACAGCCGGCTACTGCCGGAGTGACGGACGGAGACA
 
. : . : . : . : . : . :
JMSF016L18+ GATAATCCTGTTGGCGACCGGCGAGAGCGAGAATCCTCTACTTCTGCAGTCTGAGTCGCC
                      ____________________________________________________________
consensus GATAATCCTGTTGGCGACCGGCGAGAGCGAGAATCCTCTACTTCTGCAGTCTGAGTCGCC