Contig 003604:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011I04Sequence256003604 (8)775002787 (6)ref|XP_007201160.1|2e-102hypothetical protein PRUPE_ppa004290mg [Prunus persica] gb|EMJ02359.1| hypotheti
JMSF013E12Sequence450003604 (8)ref|XP_009628223.1|3e-21PREDICTED: uncharacterized protein LOC104118640 isoform X1 [Nicotiana tomentosi769002787 (6)ref|XP_007201160.1|3e-106hypothetical protein PRUPE_ppa004290mg [Prunus persica] gb|EMJ02359.1| hypotheti
JMSF023K23Sequence664003604 (8)ref|XP_008235994.1|4e-55PREDICTED: probable endo-1,4-beta-xylanase C [Prunus mume]707002787 (6)ref|XP_007201160.1|2e-112hypothetical protein PRUPE_ppa004290mg [Prunus persica] gb|EMJ02359.1| hypotheti
JMSF033J04Sequence484007954 (3)730003604 (8)emb|CBI15609.3|5e-19unnamed protein product [Vitis vinifera]
JMSF034A03Sequence679003604 (8)ref|XP_008235994.1|3e-57PREDICTED: probable endo-1,4-beta-xylanase C [Prunus mume]705002787 (6)ref|XP_007201160.1|1e-110hypothetical protein PRUPE_ppa004290mg [Prunus persica] gb|EMJ02359.1| hypotheti
JMSF036C03Sequence609003604 (8)ref|XP_008235994.1|2e-45PREDICTED: probable endo-1,4-beta-xylanase C [Prunus mume]758002787 (6)ref|XP_007201160.1|2e-128hypothetical protein PRUPE_ppa004290mg [Prunus persica] gb|EMJ02359.1| hypotheti
JMSF044N17Sequence743003604 (8)ref|XP_007041880.1|5e-67Glycosyl hydrolase family 10 protein isoform 1 [Theobroma cacao] gb|EOX97711.1| 708002787 (6)ref|XP_007201160.1|5e-84hypothetical protein PRUPE_ppa004290mg [Prunus persica] gb|EMJ02359.1| hypotheti
JMSF049H12Sequence652017956ref|XP_004229926.1|212PREDICTED: origin recognition complex subunit 5 [Solanum lycopersicum]771003604 (8)emb|CBI15609.3|2e-24unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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rJMSF049H12+                                               ATAATGGGTTAATGTGTGATGTT
                      ____________________________________________________________
consensus                                                  ATAATGGGTTAATGTGTGATGTT
 
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rJMSF033J04+                   TTATCAAGTCTGTGCAATGCTAATTTTATCAGTAAAGGAGGAAGTTGCCCT
rJMSF049H12+          CTCTTGCAATTATCAAGTCTGTGCAATGCTAATTTTATCAGTAAAGGAGGAAGTTGCCCT
                      ____________________________________________________________
consensus             CTCTTGCAATTATCAAGTCTGTGCAATGCTAATTTTATCAGTAAAGGAGGAAGTTGCCCT
 
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rJMSF033J04+          TTGGAAGGTTCATTACGGTATCGATCCATGGTTTCTGAAGATTTGGCTCTCAAGGTTGCC
rJMSF049H12+          TTGGAAGGTTCATTACGGTATCGATCCATGGTTTCTGAAGATTTGGCTCTCAAGGTTGCC
                      ____________________________________________________________
consensus             TTGGAAGGTTCATTACGGTATCGATCCATGGTTTCTGAAGATTTGGCTCTCAAGGTTGCC
 
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rJMSF033J04+          CGGACCCTAAAATTTCCTCTGTCCAAGTATTTGTACAGATAACACCTGCCTCTATGACTC
rJMSF049H12+          CGGACCCTAAAATTTCCTCTGTCCAAGTATTTGTACAGATAACACCTGCCTCTATGACTC
                      ____________________________________________________________
consensus             CGGACCCTAAAATTTCCTCTGTCCAAGTATTTGTACAGATAACACCTGCCTCTATGACTC
 
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rJMSF033J04+          TGCAAATCAAACATTGCACATTCTGTACAATGTCACATATTCTGTCAATTGAAGAGGCGG
rJMSF049H12+          TGCAAATCAAACATTGCACATTCTGTACAATGTCACATATTCTGTCAATTGAAGAGGCGG
                      ____________________________________________________________
consensus             TGCAAATCAAACATTGCACATTCTGTACAATGTCACATATTCTGTCAATTGAAGAGGCGG
 
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rJMSF033J04+          TGACAAATTAATAGTTTACGTGAAATTGGAGAAGCACAGCTGAAGCGACGGAATTAGGAC
rJMSF049H12+          TGACAAATTAATAGTTTACGTGAAATTGGAGAAGCACAGCTGAAGCGACGGAATTAGGAC
                      ____________________________________________________________
consensus             TGACAAATTAATAGTTTACGTGAAATTGGAGAAGCACAGCTGAAGCGACGGAATTAGGAC
 
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rJMSF033J04+          AGGAACACAAGCGGGAGAAGCACAGCAAAAGCGACGAAAGGAGGGGATTACCGAAAGGAA
rJMSF049H12+          AGGAACACAAGCGGGAGAAGCACAGCAAAAGCGACGAAAGGAGGGGATTACCGAAAGGAA
                      ____________________________________________________________
consensus             AGGAACACAAGCGGGAGAAGCACAGCAAAAGCGACGAAAGGAGGGGATTACCGAAAGGAA
 
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rJMSF033J04+          ATTGTTCAGTTCCGTCTGCCGCCGCCGGATCGTCAATCTGAAATTCAAAAGAGAGGGAGA
rJMSF049H12+          ATTGTTCAGTTCCGTCTGCCGCCGCCGGATCGTCAATCTGAAATTCAAAAGAGAGGGAGA
                      ____________________________________________________________
consensus             ATTGTTCAGTTCCGTCTGCCGCCGCCGGATCGTCAATCTGAAATTCAAAAGAGAGGGAGA
 
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rJMSF033J04+          GGTCGCCATCTCCAGAGTCCCGACTCCACACTTATCAAACTCTCAGGAAGATCATTACTG
rJMSF049H12+          GGTCGCCATCTCCAGAGTCCCGACTCCACACTTATCAAACTCTCAGGAAGATCATTACTG
                      ____________________________________________________________
consensus             GGTCGCCATCTCCAGAGTCCCGACTCCACACTTATCAAACTCTCAGGAAGATCATTACTG
 
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rJMSF033J04+          GCTCCAAGTTTCTCAATAGCCTTGTGAAGAAGCTGGTATCAAATCTCTTGCTTCTTCCGA
rJMSF049H12+          GCTCCAAGTTTCTCAATAGCCTTGTGAAGAAGCTGGTATCAAATCTCTTGCTTCTTCCGA
                      ____________________________________________________________
consensus             GCTCCAAGTTTCTCAATAGCCTTGTGAAGAAGCTGGTATCAAATCTCTTGCTTCTTCCGA
 
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rJMSF033J04+          TAAACTTTCCTTCCTGTTTCCGTTTTTGTGCGTTTCTGTTTCATATTTGTGGGTTTTCTG
rJMSF049H12+          TAAACTTTCCTTCCTGTTTCCGTTTTTGTGCGTTTCTGTTTCATATTTGTGGGTTTTCTG
                      ____________________________________________________________
consensus             TAAACTTTCCTTCCTGTTTCCGTTTTTGTGCGTTTCTGTTTCATATTTGTGGGTTTTCTG
 
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rJMSF033J04+          TTTGACTTACCATGTTGATTTTGGTTTGTTGATTTAAACTCCGTTGCTGCTGAGTAAATG
rJMSF049H12+          TTTGACTTACCATGTTGATTTTGGTTTGTTGATTTAAACTCCGTTGCTGCTGAGTAAATG
JMSF034A03+                                               AACTCCATTCCTGCTGAGTAAATG
JMSF023K23+                                                              GAGTAAATG
JMSF044N17+                    CCATGTTGATTTTGGTTTGTTGATTTGAACTCCATTCCTGCTGAGTAAATG
                      ____________________________________________________________
consensus             TTTGACTTACCATGTTGATTTTGGTTTGTTGATTTAAACTCCGTTGCTGCTGAGTAAATG
 
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rJMSF033J04+          GCTGCAAAGAAGCACTTGCTATCTCTATATTGATTTCTGCTTTGCCTTAATTCT      
rJMSF049H12+          GCTGCAAAGAAGCACTTGCTATCTCTATATTGATTTCTGCTTTGCCTTAATTCT      
JMSF034A03+           GCTGCAAAGAAGCACTTGCTATCTCTATATTGATTTCTGCTGTGCCTGAATTCTGAAAGT
JMSF023K23+           GCTGCAAAGAAGCACTTGCTATCTCTATATTGATTTCTGCTGTGCCTGAATTCTGAAAGT
JMSF036C03+                                                              TCTGAAAGT
JMSF044N17+           GCTGCAAAGAAGCACTTGCTATCTCTATATTGATTTCTGCTGTGCCTGAATTCTGAAAGT
                      ____________________________________________________________
consensus             GCTGCAAAGAAGCACTTGCTATCTCTATATTGATTTCTGCTGTGCCTGAATTCTGAAAGT
 
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JMSF034A03+           ACAGTAGAGATAAGTTTGATGGTGAAGTCAAAACAAATCCACCCTTGATAAAAGACCAGC
JMSF023K23+           ACAGTAGAGATAAGTTTGATGGTGAAGTCAAAACAAATCCACCCTTGATAAAAGACCAGC
JMSF036C03+           ACAGTAGAGATAAGTTTGATGGTGAAGTCAAAACAAATCCACCCTTGATAAAAGACCAGC
JMSF044N17+           ACAGTAGAGATAAGTTTGATGGTGAAGTCAAAACAAATCCACCCTTGATAAAAGACCAGC
                      ____________________________________________________________
consensus             ACAGTAGAGATAAGTTTGATGGTGAAGTCAAAACAAATCCACCCTTGATAAAAGACCAGC
 
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JMSF034A03+           AACCTTGCTTAGCAACAACAGTCCCTACACAATCTGGTTCCCCCTTTTCAGTCATGAGGC
JMSF023K23+           AACCTTGCTTAGCAACAACAGTCCCTACACAATCTGGTTCCCCCTTTTCAGTCATGAGGC
JMSF036C03+           AACCTTGCTTAGCAACAACAGTCCCTACACAATCTGGTTCCCCCTTTTCAGTCATGAGGC
JMSF044N17+           AACCTTGCTTAGCAACAACAGTCCCTACACAATCTGGTTCCCCCTTTTCAGTCATGAGGC
                      ____________________________________________________________
consensus             AACCTTGCTTAGCAACAACAGTCCCTACACAATCTGGTTCCCCCTTTTCAGTCATGAGGC
 
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JMSF034A03+           TAGCCGTTAAGAGAGCAGAATCTGCATTTTCTATTCTGACCCAACTGGAAAAACAATAAA
JMSF023K23+           TAGCCGTTAAGAGAGCAGAATCTGCATTTTCTATTCTGACCCAACTGGAAAAACAATAAA
JMSF036C03+           TAGCCGTTAAGAGAGCAGAATCTGCATTTTCTATTCTGACCCAACTGGAAAAACAATAAA
JMSF044N17+           TAGCCGTTAAGAGAGCAGAATCTGCATTTTCTATTCTGACCCAACTGGAAAAACAATAAA
JMSF013E12+                                         CTATTCTGACCCAACTGGAAAAACAATAAA
                      ____________________________________________________________
consensus             TAGCCGTTAAGAGAGCAGAATCTGCATTTTCTATTCTGACCCAACTGGAAAAACAATAAA
 
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JMSF034A03+           TTGTGCCCGCGGTTAGGTCTTGCAGCAGAAATGTTGGCGTATAAACTCCCTTTCCATTCA
JMSF023K23+           TTGTGCCCGCGGTTAGGTCTTGCAGCAGAAATGTTGGCGTATAAACTCCCTTTCCATTCA
JMSF036C03+           TTGTGCCCGCGGTTAGGTCTTGCAGCAGAAATGTTGGCGTATAAACTCCCTTTCCATTCA
JMSF044N17+           TTGTGCCCGCGGTTAGGTCTTGCAGCAGAAATGTTGGCGTATAAACTCCCTTTCCATTCA
JMSF013E12+           TTGTGCCCGCGGTTAGGTCTTGCAGCAGAAATGTTGGCGTATAAACTCCCTTTCCATTCA
                      ____________________________________________________________
consensus             TTGTGCCCGCGGTTAGGTCTTGCAGCAGAAATGTTGGCGTATAAACTCCCTTTCCATTCA
 
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JMSF034A03+           GCCCTATCACCTGTCGGGATTCTGGGACTTTACCCCCTAGTATTCCTCCACTGTATAATG
JMSF023K23+           GCCCTATCACCTGTCGGGATTCTGGGACTTTACCCCCTAGTATTCCTCCACTGTATAATG
JMSF036C03+           GCCCTATCACCTGTCGGGATTCTGGGACTTTACCCCCTAGTATTCCTCCACTGTATAATG
JMSF044N17+           GCCCTATCACCTGTCGGGATTCTGGGACTTTACCCCCTAGTATTCCTCCACTGTATAATG
JMSF013E12+           GCCCTATCACCTGTCGGGATTCTGGGACTTTACCCCCTAGTATTCCTCCACTGTATAATG
                      ____________________________________________________________
consensus             GCCCTATCACCTGTCGGGATTCTGGGACTTTACCCCCTAGTATTCCTCCACTGTATAATG
 
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JMSF034A03+           CCTCCTCTGGATGCTGTTTGCACTCTGTGTAGGCCGAGGAGTCGTATAATGGACCCTCAT
JMSF023K23+           CCTCCTCTGGATGCTGTTTGCACTCTGTGTAGGCCGAGGAGTCGTATAATGGACCCTCAT
JMSF036C03+           CCTCCTCTGGATGCTGTTTGCACTCTGTGTAGGCCGAGGAGTCGTATAATGGACCCTCAT
JMSF044N17+           CCTCCTCTGGATGCTGTTTGCACTCTGTGTAGGCCGAGGAGTCGTATAATGGACCCTCAT
JMSF011I04+                                                       TATAATGGACCCTCAT
JMSF013E12+           CCTCCTCTGGATGCTGTTTGCACTCTGTGTAGGCCGAGGAGTCGTATAATGGACCCTCAT
                      ____________________________________________________________
consensus             CCTCCTCTGGATGCTGTTTGCACTCTGTGTAGGCCGAGGAGTCGTATAATGGACCCTCAT
 
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JMSF034A03+           AAGTTGAAAGGGATGGGTTGATGAAGTAGCCCAAAAACAAGAAGAAGAAGGGTAAAGTCG
JMSF023K23+           AAGTTGAAAGGGATGGGTTGATGAAGTAGCCCAAAAACAAGAAGAAGAAGGGTAAAGTCG
JMSF036C03+           AAGTTGAAAGGGATGGGTTGATGAAGTAGCCCAAAAACAAGAAGAAGAAGGGTAAAGTCG
JMSF044N17+           AAGTTGAAAGGGATGGGTTGATGAAGTAGCCCAAAAACAAGAAGAAGAAGGGTAAAGTCG
JMSF011I04+           AAGTTGAAAGGGATGGGTTGATGAAGTAGCCCAAAAACAAGAAGAAGAAGGGTAAAGTCG
JMSF013E12+           AAGTTGAAAGGGATGGGTTGATGAAGTAGCCCAAAAACAAGAAGAAGAAGGGTAAAGTCG
                      ____________________________________________________________
consensus             AAGTTGAAAGGGATGGGTTGATGAAGTAGCCCAAAAACAAGAAGAAGAAGGGTAAAGTCG
 
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JMSF034A03+           CAGTGTTTTTCATCTTCATAGAACAGAAACTACATCAAAAGAATGGCGTGGAGTCCTGTT
JMSF023K23+           CAGTGTTTTTCATCTTCATAGAACAGAAACTACATCAAAAGAATGGCGTGGAGTCCTGTT
JMSF036C03+           CAGTGTTTTTCATCTTCATAGAACAGAAACTACATCAAAAGAATGGCGTGGAGTCCTGTT
JMSF044N17+           CAGTGTTTTTCATCTTCATAGAACAGAAACTACATCAAAAGAATGGCGTGGAGTCCTGTT
JMSF011I04+           CAGTGTTTTTCATCTTCATAGAACAGAAACTACATCAAAAGAATGGCGTGGAGTCCTGTT
JMSF013E12+           CAGTGTTTTTCATCTTCATAGAACAGAAACTACATCAAAAGAATGGCGTGGAGTCCTGTT
                      ____________________________________________________________
consensus             CAGTGTTTTTCATCTTCATAGAACAGAAACTACATCAAAAGAATGGCGTGGAGTCCTGTT
 
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JMSF034A03+           TCTTTATAGAAGAGTGAGTCAAAGTGTGGTTATGGGCGAGTGCAAATTGACCAGTAATGG
JMSF023K23+           TCTTTATAGAAGAGTGAGTCAAGGTGTGGTTATGGGCGAGTGCAAATTGACCAGTAATGG
JMSF036C03+           TCTTTATAGAAGAGTGAGTCAAGGTGTGGTTATGGGCGAGTGCAAATTGACCAGTAATGG
JMSF044N17+           TCTTTATAGAAGAGTGAGTCAAGGTGTGGTTATGGGCGAGTGCAAATTGACCAGTAATGG
JMSF011I04+           TCTTTATAGAAGAGTGAGTCAAGGTGTGGTTATGGGCGAGTGCAAATTGACCAGTAATGG
JMSF013E12+           TCTTTATAGAAGAGTGAGTCAAGGTGTGGTTATGGGCGAGTGCAAATTGACCAGTAATGG
                      ____________________________________________________________
consensus             TCTTTATAGAAGAGTGAGTCAAGGTGTGGTTATGGGCGAGTGCAAATTGACCAGTAATGG
 
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JMSF034A03+           AATCACAGGAGAAACAGTGTCAGTACCCGAATGACAATTGCCGTGTTCACAT        
JMSF023K23+           AATCACAGGAGAAACAGTGTCAGTACCCGAATGACAATTGCCGTGTTCACATGC      
JMSF036C03+           AATCACAGGAGAAACAGTGTCAGTACCCGAATGACAATTGCCGTGTTCACATGCACTG  
JMSF044N17+           AATCACAGGAGAAACAGTGTCAGTACCCGAATGACAATTGCCGTGTTCACATGCACTG  
JMSF011I04+           AATCACAGGAGAAACAGTGTCAGTACCCGAATGACAATTGCCGTGTTCACATGCACTG  
JMSF013E12+           AATCACAGGAGAAACAGTGTCAGTACCCGAATGACAATTGCCGTGTTCACATGCACTGCC
                      ____________________________________________________________
consensus             AATCACAGGAGAAACAGTGTCAGTACCCGAATGACAATTGCCGTGTTCACATGCACTGCC