Contig 003601:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013B11Sequence501003601 (2)gb|KDO36325.1|7e-33hypothetical protein CISIN_1g046287mg, partial [Citrus sinensis]727005641 (2)ref|XP_009598779.1|5e-111PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 2-like, partial [Nicot
JMSF023A19Sequence391003601 (2)gb|KDO36325.1|2e-49hypothetical protein CISIN_1g046287mg, partial [Citrus sinensis]723005641 (2)ref|XP_009598779.1|6e-109PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 2-like, partial [Nicot

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF013B11+ TGAAGCAANCCACACAGACCC
                      ____________________________________________________________
consensus TGAAGCAANCCACACAGACCC
 
. : . : . : . : . : . :
JMSF013B11+ ATCAAGTCCCCAGCCCATATAAAGTGGCGTAATACCAATAGCATCCCTGGCAGCAATGAA
                      ____________________________________________________________
consensus ATCAAGTCCCCAGCCCATATAAAGTGGCGTAATACCAATAGCATCCCTGGCAGCAATGAA
 
. : . : . : . : . : . :
JMSF023A19+ CATTGACCGTGACAACAATGGTTTTGTCTTCATTGTACAGTGGTTGATCTCCAGAAGTA
JMSF013B11+ ACATTGACCGTGACAACAATGGTTTTGTCTTCATTGTACAGTGGTTGATCTCCAGAAGTA
                      ____________________________________________________________
consensus ACATTGACCGTGACAACAATGGTTTTGTCTTCATTGTACAGTGGTTGATCTCCAGAAGTA
 
. : . : . : . : . : . :
JMSF023A19+ GGATCAATAANTGGTAATCGTTGATGTGCAAGATAACAATCACCCTGGCAATGCAATCCA
JMSF013B11+ GGATCAATAATTGCTAATCGTTGATGTGCAAGATAACAATCACCCTGGCAATGCAATCCA
                      ____________________________________________________________
consensus GGATCAATAATTGGTAATCGTTGATGTGCAAGATAACAATCACCCTGGCAATGCAATCCA
 
. : . : . : . : . : . :
JMSF023A19+ CTCCAATCGGGTCCTCTATGGCGCAACCTCCTAGAAAGCTCGATGATTCTGGACCGCTTC
JMSF013B11+ CTCCAATCGGGTCCTCTATGGCGCAACCTCCTAGAAAGCTCGATGATTCTGGACCGCTTC
                      ____________________________________________________________
consensus CTCCAATCGGGTCCTCTATGGCGCAACCTCCTAGAAAGCTCGATGATTCTGGACCGCTTC
 
. : . : . : . : . : . :
JMSF023A19+ GCCTGAGAGTTGTCTGTGCAACCGAACACTGCAAGTATTCCACACATGGCGGCGCCTCTC
JMSF013B11+ GCCTGAGAGTTGTCTGTGCAACCGAAAACTGCAAGTATTCCACACATGGCGGCGCCTCTC
                      ____________________________________________________________
consensus GCCTGAGAGTTGTCTGTGCAACCGAACACTGCAAGTATTCCACACATGGCGGCGCCTCTC
 
. : . : . : . : . : . :
JMSF023A19+ TCTCTCTCTCTCTCTCCCTCTCTCTCTCAAGTTATCTGTACGTGCGTATCTATACGCTGT
JMSF013B11+ TCTCTCTCTCTCTCTCCCTCTCTCTCTCAAGTTATCTGTACGTGCGTATCTATATGCTGT
                      ____________________________________________________________
consensus TCTCTCTCTCTCTCTCCCTCTCTCTCTCAAGTTATCTGTACGTGCGTATCTATATGCTGT
 
. : . : . : . : . : . :
JMSF023A19+ CTGAATAG
JMSF013B11+ CTGAATAGGACCTATGGGAGAGAAGAGATAGGTTGGAATGAAATGGAAGTGGAGGCTGGA
                      ____________________________________________________________
consensus CTGAATAGGACCTATGGGAGAGAAGAGATAGGTTGGAATGAAATGGAAGTGGAGGCTGGA
 
. : . : . : . : . : . :
JMSF013B11+ GGCTGCTGAGAGCTGAGCCGCCCGCTATGAGCCTTTACAAACTGGTGGCTTGACCCCCCC
                      ____________________________________________________________
consensus GGCTGCTGAGAGCTGAGCCGCCCGCTATGAGCCTTTACAAACTGGTGGCTTGACCCCCCC