clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF037A05 | Sequence | 533 | 003581 (3) | ref|XP_011076143.1| | 3e-51 | PREDICTED: uncharacterized protein LOC105160463 isoform X1 [Sesamum indicum] | 296 | 000235 (181) | sp|P09755.1|CB22_SOYBN | 2e-37 | RecName: Full=Chlorophyll a-b binding protein 2, chloroplastic; AltName: Full=L |
JMFS089C12 | Sequence | 596 | 003581 (3) | ref|XP_011076143.1| | 4e-92 | PREDICTED: uncharacterized protein LOC105160463 isoform X1 [Sesamum indicum] | |||||
JMSF010M23 | Sequence | 375 | 003581 (3) | ref|XP_009589941.1| | 82.4 | PREDICTED: uncharacterized protein LOC104087232 [Nicotiana tomentosiformis] ref| | 708 | 020314 | ref|XP_009589941.1| | 154 | PREDICTED: uncharacterized protein LOC104087232 [Nicotiana tomentosiformis] ref| |
This contig is upended
. : . : . : . : . : . :
JMFS089C12+ AGGTTTAGCTTGGATGATTTCCGACAATGT
____________________________________________________________
consensus AGGTTTAGCTTGGATGATTTCCGACAATGT
. : . : . : . : . : . :
JMFS089C12+ AGAACCAGCTTTCACATAAACTGATGGAAGGGCCCAAACCCCTGGTTTGTGGAGAAAAGA
____________________________________________________________
consensus AGAACCAGCTTTCACATAAACTGATGGAAGGGCCCAAACCCCTGGTTTGTGGAGAAAAGA
. : . : . : . : . : . :
JMFS089C12+ AGTCAGTGACATGACAAGTGAAGCCCCAGGAATTTCCTTTAGTGAGACATCATCCAGTGA
____________________________________________________________
consensus AGTCAGTGACATGACAAGTGAAGCCCCAGGAATTTCCTTTAGTGAGACATCATCCAGTGA
. : . : . : . : . : . :
JMFS089C12+ TGCAACTTCCTTAACCTCTTCCAACAAAAGCTTGTCCCAAAATGCTCCCAGTAAATCCCT
____________________________________________________________
consensus TGCAACTTCCTTAACCTCTTCCAACAAAAGCTTGTCCCAAAATGCTCCCAGTAAATCCCT
. : . : . : . : . : . :
JMFS089C12+ ATACTTACGAGATTCCTTATCAAAATTTAAGGCTCGGCGGTGCAAGCGTGTATGTCTACG
JMFF037A05+ TCCTTATCAAAATTTAAAGATCGGCGATGCAAGCGCATATGTCTACG
____________________________________________________________
consensus ATACTTACGAGATTCCTTATCAAAATTTAAGGCTCGGCGGTGCAAGCGTGTATGTCTACG
. : . : . : . : . : . :
JMFS089C12+ ATAGTTAACAGGTGAACAAAATTCCAGAGAACATTTCTCACACTTGTGCATTTGAACCTT
JMFF037A05+ ATAGTTTACAGGTGAACAAAATTCCCGGAAACATTTCACACACTTTTGCATCTGAACTTT
____________________________________________________________
consensus ATAGTTTACAGGTGAACAAAATTCCCGGGAACATTTCTCACACTTTTGCATTTGAACTTT
. : . : . : . : . : . :
JMFS089C12+ TAAAGGCGTCAGCAAAGGCCAACCTGGGAGATCTGGCTGATCTAAGGCATGAAGTAACTG
JMFF037A05+ CAAAGGTGTCAACAAAGGCCAGCCTGGAAGATCTGGCTGATCTAAGGCATGAAGTAACTG
JMSF010M23+ CATGAAGTAACTG
____________________________________________________________
consensus TAAAGGTGTCAGCAAAGGCCAGCCTGGGAGATCTGGCTGATCTAAGGCATGAAGTAACTG
. : . : . : . : . : . :
JMFS089C12+ GATCCACTGTACAGGGCTGTCCCCTGTTCTTGAGAAAGAAAGAAGAGGCTCTTTCCCTAT
JMFF037A05+ AATCAACTGTACTGGGCTGTCACCTGTTCTCGAGAAAGAAAGGAGAGGCTCCTTCCCTAT
JMSF010M23+ AATCAACTGTACTGGGCTGTCACCTGTTCTCGAGAAAGAAAGGAGAGGCTCCTTCCCTAT
____________________________________________________________
consensus AATCAACTGTACTGGGCTGTCACCTGTTCTCGAGAAAGAAAGGAGAGGCTCCTTCCCTAT
. : . : . : . : . : . :
JMFS089C12+ AGCTTGCCTAATGAATGTATCAAGTGAATCATTGCCCTCATCTGATTTCATTGCACCTGG
JMFF037A05+ AGCTTGTCTAATGAAAGTGTCAAGTGAATTATTCCCCTCATCTGATCTTGTTGCATCTGG
JMSF010M23+ AGCTTGTCTAATGAAAGTGTCAAGTGAATTATTCCCCTCATCTGATCTTGTTGCATCTGG
____________________________________________________________
consensus AGCTTGTCTAATGAAAGTGTCAAGTGAATTATTCCCCTCATCTGATCTTGTTGCATCTGG
. : . : . : . : . : . :
JMFS089C12+ AGCACCGAAAGTGCTGAGTTTTGCAACTGGCATCTATCCTCAACAGCCAATAGCTCATAA
JMFF037A05+ AGTACCAAGAGTGCCGAATTTTGCAACTGACATCTATCCTCAACAGCTAATAGCTCATAA
JMSF010M23+ AGTACCAAGAGTGCCGAATTTTGCAACTGACATCTATCCTCAACAGCTAATAGCTCATAA
____________________________________________________________
consensus AGTACCAAGAGTGCCGAATTTTGCAACTGACATCTATCCTCAACAGCTAATAGCTCATAA
. : . : . : . : . : . :
JMFS089C12+ AATGCAACAGTGA
JMFF037A05+ AATGCAACAGTGAGAAGGATCGGCAGAGATCACCGTCGCTCGGCGGGATTCAAGGCCGCC
JMSF010M23+ AATGCAACAGTGAGAAGGATCGGCAGAGATCACCGTCGCTCGGCGGGATTCAAGGCCGCC
____________________________________________________________
consensus AATGCAACAGTGAGAAGGATCGGCAGAGATCACCGTCGCTCGGCGGGATTCAAGGCCGCC
. : . : . : . : . : . :
JMFF037A05+ GGCAAAGAGAAAATTATGTAATTGACGTATGTATGTATATATGCGATTATGTAGAGAGAG
JMSF010M23+ GGCAAAGAGAAAATTATGTAATTGACGTATGTATGTATATATGCGATTATGTAGAGAGAG
____________________________________________________________
consensus GGCAAAGAGAAAATTATGTAATTGACGTATGTATGTATATATGCGATTATGTAGAGAGAG
. : . : . : . : . : . :
JMFF037A05+ ACAGCTGGCTGTGTGTACAGACGGGGACAAGTCGGCGAAAACTGTACAGGAGAGACATC
JMSF010M23+ ACAGCTGGCTGTGTGTACAGACGGGGACAAGTCGGCGAAAACTGTACAGGAGAGACATCC
____________________________________________________________
consensus ACAGCTGGCTGTGTGTACAGACGGGGACAAGTCGGCGAAAACTGTACAGGAGAGACATCC