Contig 003566:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008O08Sequence251003566 (4)ref|XP_009763010.1|8e-10PREDICTED: eukaryotic translation initiation factor 2A-like isoform X1 [Nicotia779008562 (4)ref|XP_011091567.1|1e-42PREDICTED: eukaryotic translation initiation factor 2A [Sesamum indicum]
JMSF030C19Sequence648003566 (4)ref|XP_009758482.1|7e-98PREDICTED: eukaryotic translation initiation factor 2A-like, partial [Nicotiana705008562 (4)ref|XP_011091567.1|9e-23PREDICTED: eukaryotic translation initiation factor 2A [Sesamum indicum]
JMSF042O02Sequence749003566 (4)ref|XP_009763010.1|5e-76PREDICTED: eukaryotic translation initiation factor 2A-like isoform X1 [Nicotia840008562 (4)emb|CDP10861.1|2e-44unnamed protein product [Coffea canephora]
JMSF047M14Sequence680003566 (4)ref|XP_009758482.1|7e-69PREDICTED: eukaryotic translation initiation factor 2A-like, partial [Nicotiana770008562 (4)ref|XP_011091567.1|9e-45PREDICTED: eukaryotic translation initiation factor 2A [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF042O02+ TCTTAGAAAGCTCCAGTGCAGCTATTCCAGGAACACGA
                      ____________________________________________________________
consensus TCTTAGAAAGCTCCAGTGCAGCTATTCCAGGAACACGA
 
. : . : . : . : . : . :
JMSF047M14+ TACCATCAAAAAGTTGTATCTCATTGGTT
JMSF042O02+ ACCCGTTGCACAATTCCTTTTGAGAAGTCTCTACCATCAAAAAGTTGTATCTCATTGGTT
                      ____________________________________________________________
consensus ACCCGTTGCACAATTCCTTTTGAGAAGTCTCTACCATCAAAAAGTTGTATCTCATTGGTT
 
. : . : . : . : . : . :
JMSF047M14+ GCCAATCTGCATGCAGCCATTTCATCAGAGCTAAAGCGTACAGACGGCCTACAGAAAACA
JMSF042O02+ GCCAATCTGCATGCAGCCATTTCATCAGAGCTAAAGCGTACAGACGGCCTACAGAAAACA
                      ____________________________________________________________
consensus GCCAATCTGCATGCAGCCATTTCATCAGAGCTAAAGCGTACAGACGGCCTACAGAAAACA
 
. : . : . : . : . : . :
JMSF047M14+ ACATATCACATGATAGATTTCCACAATTTGATATCAATTTCAGAAAATGGTAGGCCAAGA
JMSF042O02+ ACATATCACATGATAGATTTCCACAATTTGATATCAATTTCAGAAAATGGTAGGCCAAGA
                      ____________________________________________________________
consensus ACATATCACATGATAGATTTCCACAATTTGATATCAATTTCAGAAAATGGTAGGCCAAGA
 
. : . : . : . : . : . :
JMSF047M14+ TAAGAAAAATGCCATACCATGTAGCTTTTGCCATGTTCTTCTGATACAACTGGTAAACAG
JMSF042O02+ TAAGAAAAATGCCATACCATGTAGCTTTTGCCATGTTCTTCTGATACAACTGGTAAACAG
JMSF030C19+ CCATGTAGCTTTTGCCATGTTCTTCTGATACAACTGGTAAACAG
                      ____________________________________________________________
consensus TAAGAAAAATGCCATACCATGTAGCTTTTGCCATGTTCTTCTGATACAACTGGTAAACAG
 
. : . : . : . : . : . :
JMSF047M14+ ATTCGCCACTCACCACCTTCCACAAGACCACATTTTTGTCCTGTGGGGATGTGCATTTCT
JMSF042O02+ ATTCGCCACTCACCACCTTCCACAAGACCACATTTTTGTCCTGTGGGGATGTGCATTTCT
JMSF030C19+ ATTCGCCACTCACCACCTTCCACAAGACCACATTTTTGTCCTGTGGGGATGTGCATTTCT
                      ____________________________________________________________
consensus ATTCGCCACTCACCACCTTCCACAAGACCACATTTTTGTCCTGTGGGGATGTGCATTTCT
 
. : . : . : . : . : . :
JMSF047M14+ GGAAGGTCTGGAGGTATGTTCCACAAGGAGAAATAACAGCAGCAAGCACATTGGGAATTT
JMSF042O02+ GGAAGGTCTGGAGGTATGTTCCACAAGGAGAAATAACAGCAGCAAGCACATTGGGAATTT
JMSF030C19+ GGAAGGTCTGGAGGTATGTTCCACAAGGAGAAATAACAGCAGCAAGCACATTGGGAATTT
                      ____________________________________________________________
consensus GGAAGGTCTGGAGGTATGTTCCACAAGGAGAAATAACAGCAGCAAGCACATTGGGAATTT
 
. : . : . : . : . : . :
JMSF047M14+ CAAAACTCCTAATCTCTTTCAAGGTTTTACAATCATGCACACTAATTACTGAGTCTGATT
JMSF042O02+ CAAAACTCCTAATCTCTTTCAAGGTTTTACAATCATGCACACTAATTACTGAGTCTGATT
JMSF030C19+ CAAAACTCCTAATCTCTTTCAAGGTTTTACAATCATGCACACTAATTACTGAGTCTGATT
                      ____________________________________________________________
consensus CAAAACTCCTAATCTCTTTCAAGGTTTTACAATCATGCACACTAATTACTGAGTCTGATT
 
. : . : . : . : . : . :
JMSF047M14+ TCATAACCATGAGTTTTGACCCATCTTCACTAAACTTTGCACTTGTACAAGGGACTGTAG
JMSF042O02+ TCATAACCATGAGTTTTGACCCATCTTCACTAAACTTTGCACTTGTACAAGGGACTGTAG
JMSF030C19+ TCATAACCATGAGTTTTGACCCATCTTCACTAAACTTTGCACTTGTACAAGGGACTGTAG
JMSF008O08+ AGGGACTGTAG
                      ____________________________________________________________
consensus TCATAACCATGAGTTTTGACCCATCTTCACTAAACTTTGCACTTGTACAAGGGACTGTAG
 
. : . : . : . : . : . :
JMSF047M14+ CGAGCCTGATACTAGGTTGACCATTAGGGAAAGGCGGCCCATCCCAAATAGCATAACCTT
JMSF042O02+ CGAGCCTGATACTAGGTTGACCATTAGGGAAAGGCGGCCCATCCCAAATAGCATAACCTT
JMSF030C19+ CGAGCCTGATACTAGGTTGACCATTAGGGAAAGGCGGCCCATCCCAAATAGCATAACCTT
JMSF008O08+ CGAGCCTGATACTAGGTTGACCATTAGGGAAAGGCGGCCCATCCCAAATAGCATAACCTT
                      ____________________________________________________________
consensus CGAGCCTGATACTAGGTTGACCATTAGGGAAAGGCGGCCCATCCCAAATAGCATAACCTT
 
. : . : . : . : . : . :
JMSF047M14+ CTGGTCCTCTTATCAAAATTTCCATTGCCGGCGAGGTCTCTGAAACTGCCATTTGAAGGT
JMSF042O02+ CTGGTCCTCTTATCAAAATTTCCATTGCCGGCGAGGTCTCTGAAACTGCCATTTGAAGGT
JMSF030C19+ CTGGTCCTCTTATCAAAATTTCCATTGCCGGCGAGGTCTCTGAAACTGCCATTTGAAGGT
JMSF008O08+ CTGGTCCTCTTATCAAAATTTCCATTGCCGGCGAGGTCTCTGAAACTGCCATTTGAAGGT
                      ____________________________________________________________
consensus CTGGTCCTCTTATCAAAATTTCCATTGCCGGCGAGGTCTCTGAAACTGCCATTTGAAGGT
 
. : . : . : . : . : . :
JMSF047M14+ TTCAAAAATGCTCTCCAGTATCAAGATTCCCACCAGTCACTCAATAAGCAAAACTGAAAA
JMSF042O02+ TTCAAAAATGCTCTCCAGTATCAAGATTCCCACCAGTCACTCAATAAGCAAAACTGAAAA
JMSF030C19+ TTCAAAAATGCTCTCCAGTATCAAGATTCCCACCAGTCACTCAATAAGCAAAACTGAAAA
JMSF008O08+ TTCAAAAATGCTCTCCAGTATCAAGATTCCCACCAGTCACTCAATAAGCAAAACTGAAAA
                      ____________________________________________________________
consensus TTCAAAAATGCTCTCCAGTATCAAGATTCCCACCAGTCACTCAATAAGCAAAACTGAAAA
 
. : . : . : . : . : . :
JMSF047M14+ GCAAACCAGTTGACGGCGGTTCCGGTCGGAGTTCTTCAGCGAAGTGAG
JMSF042O02+ GCAAACCAGTTGACGGCGGTTCCGGTCGGAGTTCTTCAGCGAAGTGAG
JMSF030C19+ GCAAACCAGTTGACGGCGGTTCCGGTCGGAGTTCTTCAGCGAAGTGAG
JMSF008O08+ GCAAACCAGTTGACGGCGGTTCCGGTCGGAGTTCTTCAGCGAAGTGAGTCGAGGCACCCC
                      ____________________________________________________________
consensus GCAAACCAGTTGACGGCGGTTCCGGTCGGAGTTCTTCAGCGAAGTGAGTCGAGGCACCCC