Contig 003549:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF006J17Sequence418003549 (2)230002762 (2)
JMSF050L22Sequence577003549 (2)613012308 (4)ref|XP_010249267.1|2e-72PREDICTED: protein NRT1/ PTR FAMILY 6.1-like isoform X2 [Nelumbo nucifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF050L22+ GTATTGAGCTGAATTTTCTTNGGAGCCTNTTCTTTCTTTACA
                      ____________________________________________________________
consensus GTATTGAGCTGAATTTTCTTNGGAGCCTNTTCTTTCTTTACA
 
. : . : . : . : . : . :
JMSF050L22+ GTCCTATTAGTGGCNTTTTCTTTATTTCCGTCTTCTTCATTACTTGTAGATCTTTTCTTT
                      ____________________________________________________________
consensus GTCCTATTAGTGGCNTTTTCTTTATTTCCGTCTTCTTCATTACTTGTAGATCTTTTCTTT
 
. : . : . : . : . : . :
JMSF050L22+ TTCCGGTAGGTTTTGGTAACCTCTTTTAATGATAAATCTACTTCTTGGCTAGACATAGTT
                      ____________________________________________________________
consensus TTCCGGTAGGTTTTGGTAACCTCTTTTAATGATAAATCTACTTCTTGGCTAGACATAGTT
 
. : . : . : . : . : . :
JMSF050L22+ GCTGTTGGATGATTTTCNTAAGCCACATATCCTCACAGACNACACTAGAACCCAGAATGA
                      ____________________________________________________________
consensus GCTGTTGGATGATTTTCNTAAGCCACATATCCTCACAGACNACACTAGAACCCAGAATGA
 
. : . : . : . : . : . :
JMSF050L22+ GAAAGCCNAATTCNGAAGCAGGCGAATTAATGGTCCTCCCATCCGAATCCTCAAAANGAG
JMSF006J17+ AGCAGGCAAAGTAATGGTCCTCCCATCCGAATCCTCAAAAAGAG
                      ____________________________________________________________
consensus GAAAGCCNAATTCNGAAGCAGGCGAATTAATGGTCCTCCCATCCGAATCCTCAAAAAGAG
 
. : . : . : . : . : . :
JMSF050L22+ AATACAAATCAGCACAATCCATGGAAAATGTGAGGCGTTCTGGTGTTAGATCAAGCCCAA
JMSF006J17+ AATAGAAATCAACACAATCCATGG-AAATGTGTGGCGTTGCGGTGTTAGATCAAGCGCAA
                      ____________________________________________________________
consensus AATAGAAATCAGCACAATCCATGGAAAATGTGTGGCGTTGTGGTGTTAGATCAAGCGCAA
 
. : . : . : . : . : . :
JMSF050L22+ CATCTCCAATTAACAATGCAGCGNTGAANCGAGTACTGGGAATACCTCTGAGCAACAATG
JMSF006J17+ CATCACCAATTAACAAAGCGGCGCTGAAACAAGTACTGGGAATACCACTGAGCAGCAATG
                      ____________________________________________________________
consensus CATCTCCAATTAACAATGCGGCGCTGAAACGAGTACTGGGAATACCTCTGAGCAGCAATG
 
. : . : . : . : . : . :
JMSF050L22+ GCGAAGCGTCGAA
JMSF006J17+ GCGAAACGTCGAAGTAGAGGAGGAGGGCGGTGTGGCGGAGGAAAGCTTATCACAGGGCGG
                      ____________________________________________________________
consensus GCGAAGCGTCGAAGTAGAGGAGGAGGGCGGTGTGGCGGAGGAAAGCTTATCACAGGGCGG
 
. : . : . : . : . : . :
JMSF006J17+ AGCACTGGAGCAGAAACCCTAAAGTCTCTAAAATAATTGCGCTAAATGCGGTGTTTATGC
                      ____________________________________________________________
consensus AGCACTGGAGCAGAAACCCTAAAGTCTCTAAAATAATTGCGCTAAATGCGGTGTTTATGC
 
. : . : . : . : . : . :
JMSF006J17+ ACGATGAGAAGAAATGCAAGAAAATACAATTACGTCTATACAATAAATAATAATTTGGTC
                      ____________________________________________________________
consensus ACGATGAGAAGAAATGCAAGAAAATACAATTACGTCTATACAATAAATAATAATTTGGTC