Contig 003548:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF049P05Sequence609003548 (3)gb|AHW50673.1|2e-31serine/threonine-protein kinase [Nicotiana tabacum]554012474 (5)ref|XP_002511480.1|2e-08ribosomal protein S6 kinase, putative [Ricinus communis] gb|EEF52082.1| ribosoma
JMFS036D11Sequence610003548 (3)gb|AHW50673.1|2e-38serine/threonine-protein kinase [Nicotiana tabacum]
JMSF006J06Sequence319003548 (3)579012474 (5)gb|ABI34273.1|4e-31Serine/threonine-protein kinase AtPK19 , putative [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS036D11+ TCCTTTCCCGATCACCCTCAAGATCTCAAAGTCATCGG
JMFF049P05+ CAAAGTCATCGG
                      ____________________________________________________________
consensus TCCTTTCCCGATCACCCTCAAGATCTCAAAGTCATCGG
 
. : . : . : . : . : . :
JMFS036D11+ GTCCAATCTTTCGGAGCCCCAAACACTCAGCCTCATTATTTCGAATACTACTACTTGTAG
JMFF049P05+ GTCCAATCTTTCGGAGCCCCAAACACTCAGCCTCATTATTTCGAATACTACTACTTGTAG
                      ____________________________________________________________
consensus GTCCAATCTTTCGGAGCCCCAAACACTCAGCCTCATTATTTCGAATACTACTACTTGTAG
 
. : . : . : . : . : . :
JMFS036D11+ TGTTAACAGCTATATCGTTGTTGTCGAGTTTTTCAGTGTCATTTTCCCCTTCGGAGTCGA
JMFF049P05+ TGTTAACAGCTATATCGTTGTTGTCGAGTTNTTCAGTGTCATTTTCCCCTTCGGAGTCGA
                      ____________________________________________________________
consensus TGTTAACAGCTATATCGTTGTTGTCGAGTTTTTCAGTGTCATTTTCCCCTTCGGAGTCGA
 
. : . : . : . : . : . :
JMFS036D11+ TTTCTTGGTGGAAAGGGAGGGGTTTAGAGAGGGTGAAGCGCGGGGAAGGGCCCAGAAAGG
JMFF049P05+ TTTCTTGGTGGAAAGGGAGGGGTTTAGAGAGGGTGAAGCGCGGGGAAGGGCCCAGAAAGG
                      ____________________________________________________________
consensus TTTCTTGGTGGAAAGGGAGGGGTTTAGAGAGGGTGAAGCGCGGGGAAGGGCCCAGAAAGG
 
. : . : . : . : . : . :
JMFS036D11+ AGTGAGAGCGGCTGTGGATAACTTGTGGGTCTCCCGGAAAGTGCGATGATGGGGAAGATG
JMFF049P05+ AGTGAGAGCGGCTGTGGATAACTTGTGGGTCTCCCGGAAAGTGCGATGATGGGGAAGATG
                      ____________________________________________________________
consensus AGTGAGAGCGGCTGTGGATAACTTGTGGGTCTCCCGGAAAGTGCGATGATGGGGAAGATG
 
. : . : . : . : . : . :
JMFS036D11+ CGGCGAGTGGGCCGAAGAGTTGGGAGAATTCGAGGTCTGGGTCGGTCGCGGATTCGGGGA
JMFF049P05+ CGGCGAGTGGGCCGAAGAGTTGGGAGAATTCGAGGTCTGGGTCGGTCGCGGATTCGGGGA
JMSF006J06+ TCTGGNTCGGTCGCGGATTCGGGGA
                      ____________________________________________________________
consensus CGGCGAGTGGGCCGAAGAGTTGGGAGAATTCGAGGTCTGGGTCGGTCGCGGATTCGGGGA
 
. : . : . : . : . : . :
JMFS036D11+ TTTTGAGGTTGGTGAGCTTGGAGGCGAGGATGGAGTGAAGAGCCTTCTTCTTCAGCTCAG
JMFF049P05+ TTTTGAGGTTGGTGAGATTGGAGGCGAGGATGGAGTGAAGAGCCTTCTTCTTCAGCTCAG
JMSF006J06+ TTTTGAGGTTGGTGAGCTTGGAGGCGAGGATGGAGTGAAGAGCCTTCTTCTTCAGCTCAG
                      ____________________________________________________________
consensus TTTTGAGGTTGGTGAGCTTGGAGGCGAGGATGGAGTGAAGAGCCTTCTTCTTCAGCTCAG
 
. : . : . : . : . : . :
JMFS036D11+ CT------GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGCATATTCATGGCGAAATAGT
JMFF049P05+ CTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGCATATTCATGGCGAAATAGT
JMSF006J06+ CT------GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGCATATTCATGGCGAAATAGT
                      ____________________________________________________________
consensus CT------GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGCATATTCATGGCGAAATAGT
 
. : . : . : . : . : . :
JMFS036D11+ GTTTGGTTTCTTTGATGATTGGGCAGACTAGAGAGAGGCAGCTGAGATTGAACCCCGGGC
JMFF049P05+ GTTTGGTTTCTTTGATGATTGGGCAGACTAGAGAGAGGCAGCTGAGATTGAACCCCGGGC
JMSF006J06+ GTTTGGTTTCTTTGATGATTGGGCAGACTAGAGAGAGGCAGCTGAGATTGAACCCCGGGC
                      ____________________________________________________________
consensus GTTTGGTTTCTTTGATGATTGGGCAGACTAGAGAGAGGCAGCTGAGATTGAACCCCGGGC
 
. : . : . : . : . : . :
JMFS036D11+ GGGTTGAAGAGAACACGACTACATCTGGGGTGGTGGATGCCGGAGGGAGGCGGCGGAAGA
JMFF049P05+ GGGTTGAAGAGAACACGACTACATCTGGGGTGGTGGATGCCGGAGGGAGGCGGCGGAAGA
JMSF006J06+ GGGTTGAAGAGAACACGACTACATCTGGGGTGGTGGATGCCGGAGGGAGGCGGCGGAAGA
                      ____________________________________________________________
consensus GGGTTGAAGAGAACACGACTACATCTGGGGTGGTGGATGCCGGAGGGAGGCGGCGGAAGA
 
. : . : . : . : . : . :
JMFS036D11+ CGGCGGAGAAGTGGTGGTGATTTGATTATTAAACC
JMFF049P05+ CGGCGGAGAAGTGGTGGTGATTTGATTATTAAA-CCGGGGAGTGATGGAATTGAAATC
JMSF006J06+ CGGCGGAGAAGTGGTGGTGATTTGATTATTAAACCCGGGGAGTGATGGAATTGAAATCCC
                      ____________________________________________________________
consensus CGGCGGAGAAGTGGTGGTGATTTGATTATTAAACCCGGGGAGTGATGGAATTGAAATCCC