Contig 003547:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF006H11Sequence272003547 (3)ref|XP_007134951.1|1e-04hypothetical protein PHAVU_010G089400g [Phaseolus vulgaris] gb|ESW06945.1| hypot147013343 (3)gb|AAF78518.1|AF195221_12e-13chlorophyll a/b-binding protein [Pyrus pyrifolia]
JMSF017M01Sequence226003547 (3)743001407 (2)ref|XP_011091321.1|3e-115PREDICTED: ATPase GET3 [Sesamum indicum]
JMSF030N24Sequence631003547 (3)ref|XP_009772649.1|4e-78PREDICTED: ATPase GET3-like [Nicotiana sylvestris]681001407 (2)ref|XP_009594780.1|4e-72PREDICTED: ATPase GET3 {ECO:0000255|HAMAP-Rule:MF_03112}-like [Nicotiana toment

Alignment

This contig is upended


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JMSF030N24+ TNTNCAAGGCCTTTNTCCAGTGNTGATGGAA
                      ____________________________________________________________
consensus TNTNCAAGGCCTTTNTCCAGTGNTGATGGAA
 
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JMSF030N24+ ATNGTAATAACCGGAGTGTGTGACCCGTNGGAGCAGTATCAAATANTATAACAGAATAAT
                      ____________________________________________________________
consensus ATNGTAATAACCGGAGTGTGTGACCCGTNGGAGCAGTATCAAATANTATAACAGAATAAT
 
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JMSF030N24+ CCATAGTTTGCANTAATTTTAGCATNTCAGCAAAANTCATTGCNTCATCAATCCCAGGAA
                      ____________________________________________________________
consensus CCATAGTTTGCANTAATTTTAGCATNTCAGCAAAANTCATTGCNTCATCAATCCCAGGAA
 
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JMSF030N24+ TTGCATTTGNTAANTCAGACAAAAATCCATCCATTCCATCCGATCCAACCGTGTNTTCAT
                      ____________________________________________________________
consensus TTGCATTTGNTAANTCAGACAAAAATCCATCCATTCCATCCGATCCAACCGTGTNTTCAT
 
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JMSF030N24+ TNTCAACATTTGGATCAACTTCCATGGCATAAAGATTGGAGAAGCCATTGACGAGGGTGG
                      ____________________________________________________________
consensus TNTCAACATTTGGATCAACTTCCATGGCATAAAGATTGGAGAAGCCATTGACGAGGGTGG
 
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JMSF030N24+ GAAACTTAGTGAATCGCTGCTGGAAAGCGTCGCTGAGATTGTGGGCAGGGTCTGTAGAGA
                      ____________________________________________________________
consensus GAAACTTAGTGAATCGCTGCTGGAAAGCGTCGCTGAGATTGTGGGCAGGGTCTGTAGAGA
 
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JMSF030N24+ TGATGAGCACAGAGGATCGGACCTGAGCGAGTAATATACCAAGAATGGAGCTGCAAGTGG
JMSF006H11+ GAGTAATATACCAAGAANGGAGCTGCAAGTGG
                      ____________________________________________________________
consensus TGATGAGCACAGAGGATCGGACCTGAGCGAGTAATATACCAAGAATGGAGCTGCAAGTGG
 
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JMSF017M01+ CCACCCTTCCCCCCTACAAAAACCCACTTCAATGTATCCTGCTCTAAAA
JMSF030N24+ TTTTCCCAACCCCACCCTTCCCCCCTACAAAAACCCACTTCAATGTATCCTGCTCTAAAA
JMSF006H11+ TTTTCCCAACCCCACCCTTCCCCCCTACAAAAACCCACTTCAATGTATCTTGCTCTAAAA
                      ____________________________________________________________
consensus TTTTCCCAACCCCACCCTTCCCCCCTACAAAAACCCACTTCAATGTATCCTGCTCTAAAA
 
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JMSF017M01+ TATTCTGCACTGAGCCTTCTAGAGTATCGGCCATGAATAAGGTCCCTTCTCTACTCGTTT
JMSF030N24+ TATTCTGCACTGAGCCTTCTAGAGTATCGGCCATGAATAAGGTCCCTTCTCTACTCGTTT
JMSF006H11+ TATTCTGCACTGAGCCTTCTAGAGTATCGGCCATGAATAAGGTCCCTTCTCTACTCGTTT
                      ____________________________________________________________
consensus TATTCTGCACTGAGCCTTCTAGAGTATCGGCCATGAATAAGGTCCCTTCTCTACTCGTTT
 
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JMSF017M01+ TGCTCTGCTCTTCTAGCGTTGAGATTTAGACAATAACCCAAAAACAAAGAACGGCAGAAT
JMSF030N24+ TGCTCTGCTCTTCTAGCGTTGAGATTTAGACAATAACCCAAAAACAAAGAACGGCAGAAT
JMSF006H11+ TGCTCTGCTCTTCTAGCGTTGAGATTTAGACAATAACCCAAAAACAAAGAACGGCAGAAT
                      ____________________________________________________________
consensus TGCTCTGCTCTTCTAGCGTTGAGATTTAGACAATAACCCAAAAACAAAGAACGGCAGAAT
 
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JMSF017M01+ TTCCTGGGTTTCGCTGGAAGAGATCTCTTACCTCTTCTATGCTGTGACAAGATCC
JMSF030N24+ TTCCTGGGTTTCGCTGGAAGAGATCTCTTACCTCTTCTATGCTGTGACAAGATCC
JMSF006H11+ TTCCTGGGTTTCGCTGGAAGAGATCTCTTACCTCTTCTATGCTGTGACAAGATCCTACGC
                      ____________________________________________________________
consensus TTCCTGGGTTTCGCTGGAAGAGATCTCTTACCTCTTCTATGCTGTGACAAGATCCTACGC