| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS012C08 | Sequence | 619 | 003539 (8) | gb|KDO43322.1| | 7e-96 | hypothetical protein CISIN_1g0039661mg, partial [Citrus sinensis] | |||||
| JMFS051D05 | Sequence | 621 | 003539 (8) | emb|CDP16685.1| | 1e-106 | unnamed protein product [Coffea canephora] | |||||
| JMFS139E10 | Sequence | 110 | 003539 (8) | ref|XP_008379124.1| | 1e-11 | PREDICTED: chloride channel protein CLC-b isoform X2 [Malus domestica] | |||||
| JMSF001C04 | Sequence | 354 | 003539 (8) | ref|XP_009761471.1| | 1e-38 | PREDICTED: chloride channel protein CLC-b-like [Nicotiana sylvestris] | 786 | 008434 (7) | ref|XP_009596046.1| | 8e-103 | PREDICTED: chloride channel protein CLC-b-like [Nicotiana tomentosiformis] |
| JMSF002L02 | Sequence | 426 | 003539 (8) | gb|KDO43322.1| | 2e-55 | hypothetical protein CISIN_1g0039661mg, partial [Citrus sinensis] | 366 | 008434 (7) | |||
| JMSF005L05 | Sequence | 417 | 003539 (8) | ref|XP_008379123.1| | 7e-47 | PREDICTED: chloride channel protein CLC-b isoform X1 [Malus domestica] | 534 | 008434 (7) | ref|XP_009596046.1| | 7e-62 | PREDICTED: chloride channel protein CLC-b-like [Nicotiana tomentosiformis] |
| JMSF007F01 | Sequence | 428 | 003539 (8) | gb|KDO43322.1| | 2e-55 | hypothetical protein CISIN_1g0039661mg, partial [Citrus sinensis] | 812 | 008434 (7) | ref|XP_009596046.1| | 1e-58 | PREDICTED: chloride channel protein CLC-b-like [Nicotiana tomentosiformis] |
| JMSF031I20 | Sequence | 625 | 003539 (8) | emb|CDP16685.1| | 7e-83 | unnamed protein product [Coffea canephora] | 751 | 008434 (7) | ref|XP_009596046.1| | 2e-94 | PREDICTED: chloride channel protein CLC-b-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFS051D05+ TTTCCTAGATCCAAGCCTGCAGCAACTGCCCCAATGCTT
JMSF031I20+ CCAATGCTT
____________________________________________________________
consensus TTTCCTAGATCCAAGCCTGCAGCAACTGCCCCAATGCTT
. : . : . : . : . : . :
JMFS051D05+ CCAACAATCTTGACGATGAGTGTCGTGGCGCCAAACATGTTGGGAGTGTCCACTCCATTG
JMSF031I20+ CCAACAATCTTGACGATGAGTGTCGTGGCGCCAAACATGTTGGGAGTGTCCACTCCATTG
JMFS012C08+ GTCGTGGCGCCAAACATGTTGGGAGTGTCCACTCCATTG
____________________________________________________________
consensus CCAACAATCTTGACGATGAGTGTCGTGGCGCCAAACATGTTGGGAGTGTCCACTCCATTG
. : . : . : . : . : . :
JMFS051D05+ AGATAAGCCTTGATTTCAGGTATTCCAGGGCCAGCAGCAGTGGGTGCAAAAAACACACAG
JMSF031I20+ AGATAAGCCTTGATTTCAGGTATTCCAGGGCCAGCAGCAGTGGGTGC-AAAAACACACAG
JMFS012C08+ AGATAAGCCTTGATTTCAGGTATTCCAGGGCCAGCAGCAGTGGGTGCAAAAAACACACAG
____________________________________________________________
consensus AGATAAGCCTTGATTTCAGGTATTCCAGGGCCAGCAGCAGTGGGTGCAAAAAACACACAG
. : . : . : . : . : . :
JMFS051D05+ AGAACGGAAGCTACAAATGTGAGCACAAAATTGGCCCCAGCAAAATATGCAAATCCCATC
JMSF031I20+ AGAACGGAAGCTACAAATGTGAGCACAAAATTGGCCCCAGCAAAATATGCAAATCCCATC
JMFS012C08+ AGAACGGAAGCTACAAATGTGAGCACAAAATTGGCCCCAGCAAAATATGCAAATCCCATC
____________________________________________________________
consensus AGAACGGAAGCTACAAATGTGAGCACAAAATTGGCCCCAGCAAAATATGCAAATCCCATC
. : . : . : . : . : . :
JMFS051D05+ AGGTACCTTTTCTTGTCGATGTAGTCAACAACTGCAAGAAGTTTGTAGCCTGCAATGTTC
JMSF031I20+ AGGTACCTTTTCTTGTCGATGTAGTCAACAACTGCAAGAAGTTTGTAGCCTGCAATGTTC
JMSF007F01+ TCGATGTAGTCNACAACTGCAAGAAGTTNGTAGCCTGCAATGTTC
JMSF002L02+ ATGTAGTCAACAACTGCAAGAAGTTTGTAGCCTGCAATGTTC
JMFS012C08+ AGGTACCTTTTCTTGTCGATGTAGTCAACAACTGCAAGAAGTTTGTAGCCTGCAATGTTC
____________________________________________________________
consensus AGGTACCTTTTCTTGTCGATGTAGTCAACAACTGCAAGAAGTTTGTAGCCTGCAATGTTC
. : . : . : . : . : . :
JMFS051D05+ TCCACAGCTAGATTGATGAGAGTGGCTATGATTCCTGTGAGAAGTCCTACCAGGAATGCC
JMSF031I20+ TCCACAGCTAGATTGATGAGAGTGGCTATGATTCCTGTGAGAAGTCCTACCAGGAATGCC
JMSF007F01+ TCCACAGCTAGATTGATGAGAGTGGCTATGATTCCTGTGAGAAGTCCTACCAGGAATGCC
JMSF002L02+ TCCACAGCTAGATTGACGAGAGTGGCTATGATTCCTGTGAGAAGTCCTACCAGGAATGCC
JMSF001C04+ CCAGGAATGCC
JMFS012C08+ TCCACAGCTAGATTGATGAGAGTGGCTATGATTCCTGTGAGAAGTCCTACCAGGAATGCC
JMSF005L05+ ACAGCTAGATTGATGAGAGTGGCTATGATTCCTGTGAGAAGTCCTACCAGGAATGCC
____________________________________________________________
consensus TCCACAGCTAGATTGATGAGAGTGGCTATGATTCCTGTGAGAAGTCCTACCAGGAATGCC
. : . : . : . : . : . :
JMFS051D05+ AGTGTCCACTTCAGGAACACATACTGCAAAACCTGGGTTCTTGATCTGCTCCTCCAATCA
JMSF031I20+ AGTGTCCACTTCAGGAACACATACTGCAAAACCTGGGTTCTTGATCTGCTCCTCCAATCA
JMSF007F01+ AGTGTCCACTTCAGGAACACATACTGCAAAACCTGGGTTCTTGATCTGCTCCTCCAATCA
JMSF002L02+ AGTGTCCACTTCAGGAACACATACTGCAAAACCTGGGTTCTTGATCTGCTCCTCCAATCA
JMSF001C04+ AGTGTCCACTTCAGGAACACATACTGCAAAACCTGGGTTCTTGATCTGCTCCTCCAATCA
JMFS012C08+ AGTGTCCACTTCAGGAACACATACTGCAAAACCTGGGTTCTTGATCTGCTCCTCCAATCA
JMSF005L05+ AGTGTCCACTTCAGGAACACATACTGCAAAACCTGGGTTCTTGATCTGCTCCTCCAATCA
____________________________________________________________
consensus AGTGTCCACTTCAGGAACACATACTGCAAAACCTGGGTTCTTGATCTGCTCCTCCAATCA
. : . : . : . : . : . :
JMFS051D05+ TGCTTGAACAGATCATTCTCGTTGATCTCATAATCCAAACTCTCTATGTGAGAAACCTTG
JMSF031I20+ TGCTTGAACAGATCATTCTCGTTGATCTCATAATCCAAACTCTCTATGTGAGAAACCTTG
JMSF007F01+ TGCTTGAACAGATCATTCTCGTTGATCTCATAATCCAAACTCTCTATGTGAGAAACCTTG
JMSF002L02+ TGCTTGAACAGATCATTCTCGTTGATCTCATAATCCAAACTCTCTATGTGAGAAACCTTG
JMSF001C04+ TGCTTGAACAGATCATTCTCGTTGATCTCATAATCCAAACTCTCTATGTGAGAAACCTTG
JMFS139E10+ TATGTGAGAAACCTTG
JMFS012C08+ TGCTTGAACAGATCATTCTCGTTGATCTCATAATCCAAACTCTCTATGTGAGAAACCTTG
JMSF005L05+ TGCTTGAACAGATCATTCTCGTTGATCTCATAATCCAAACTCTCTATGTGAGAAACCTTG
____________________________________________________________
consensus TGCTTGAACAGATCATTCTCGTTGATCTCATAATCCAAACTCTCTATGTGAGAAACCTTG
. : . : . : . : . : . :
JMFS051D05+ GCTCCAACCATGGCTAGTGGACTGGAGGAAAGCGTTAGGTTTCTCTTGAGGAGCAGAGGC
JMSF031I20+ GCTCCAACCATGGCTAGTGGACTGGAGGAAAGCGTTAGGTTTCTCTTGAGGAGCAGAGGC
JMSF007F01+ GCTCCAACCATGGCTAGTGGACTGGAGGAAAGCGTTAGGTTTCTCTTGAGGAGCAGAGGC
JMSF002L02+ GCTCCAACCATGGCTAGTGGACTGGAGGAAAGCGTTAGGTTTCTCTTGAGGAGCAGAGGC
JMSF001C04+ GCTCCAACCATGGCTAGTGGACTGGAGGAAAGCGTTAGGTTTCTCTTGAGGAG
JMFS139E10+ GCTCCAACCATGGCTAGTGGACTGGAGGAAAGCGTTAGGTTTCTCTTGAGGAGCAGAGGC
JMFS012C08+ GCTCCAACCATGGCTAGTGGACTGGAGGAAAGCGTTAGGTTTCTCTTGAGGAGCAGAGGC
JMSF005L05+ GCTCCAACCATGGCTAGTGGACTGGAGGAAAGCGTTAGGTTTCTCTTGAGGAGCAGAGGC
____________________________________________________________
consensus GCTCCAACCATGGCTAGTGGACTGGAGGAAAGCGTTAGGTTTCTCTTGAGGAGCAGAGGC
. : . : . : . : . : . :
JMFS051D05+ TGATGCAGAGAGTTGCTCTCTGGGTCTCTCTCAGCTTCTTCTTCTTCAGCTTGTCCCGCC
JMSF031I20+ TGATGCAGAGAGTTGCTCTCTGGGTCTCTCTCAGCTTCTTCTTCTTCAGCTTGTCCCGCC
JMSF007F01+ TGATGCAGAGAGTTGCTCTCTGGGTCTCTCTCAGCTTCTTCTTCTTCAGCTTGTCCCGCC
JMSF002L02+ TGATGCAGAGAGTTGCTCTCTGGGTCTCTCTCAGCTTCTTCTTCTTCAGCTTGTCCCGCC
JMFS139E10+ TGATGCAGAGAGTTGCTCTCTGGGTCTCTCTCAG
JMFS012C08+ TGATGCAGAGAGTTGCTCTCTGGGTCTCTCTCAGCTTCTTCTTCTTCAGCTTGTCCCGCC
JMSF005L05+ TGATGCAGAGAGTTGCTCTCTGGGTCTCTCTCAGCTTCTTCTTCTTCAGCTTGTCCCGCC
____________________________________________________________
consensus TGATGCAGAGAGTTGCTCTCTGGGTCTCTCTCAGCTTCTTCTTCTTCAGCTTGTCCCGCC
. : . : . : . : . : . :
JMFS051D05+ ATGGCTATCGTCGTTGCACTTTCTGCATACTGCTCCTCCATC
JMSF031I20+ ATGGCTATCGTCGTTGCACTTTCTGCATACTGCTCCTCCATCCTGGATGCGGAAACTCTC
JMSF007F01+ ATGGCTATCGTCGTTGCACTTTCTGCATACTGCTCCTCCATCCTGGATGCGGAAACTCTC
JMSF002L02+ ATGGCTATCGTCGTTGCACTTTCTGCATACTGCTCCTCCATCCTGGATGCGGAAACTCTC
JMFS012C08+ ATGGCTATCGTCGTTGCACTTTCTGCATACTGCTCCTCCATCCTGGATGCGGAAACTCTC
JMSF005L05+ ATGGCTATCGTCGTTGCACTTTCTGCATACTGCTCCTCCATCCTGGATGCGGAAACTCTC
____________________________________________________________
consensus ATGGCTATCGTCGTTGCACTTTCTGCATACTGCTCCTCCATCCTGGATGCGGAAACTCTC
. : . : . : . : . : . :
JMSF007F01+ AAATCTTATCAGCTCCACCCTCC
JMSF002L02+ AAATCTTATCAGCTCCACCCTC
JMFS012C08+ AAATCTTATCAGCTCCACCCTCCAAATAATATGATGCCAG
JMSF005L05+ AAATCTTATCAGCTCCACCCTCCAAATAATATGATGCCAGAGGATTATTTTGTATGTCTC
____________________________________________________________
consensus AAATCTTATCAGCTCCACCCTCCAAATAATATGATGCCAGAGGATTATTTTGTATGTCTC