Contig 003538:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026N07Sequence496003538 (6)gb|EYU22365.1|9e-68hypothetical protein MIMGU_mgv1a0228112mg, partial [Erythranthe guttata]763001143 (6)ref|XP_009630232.1|147PREDICTED: serine/threonine-protein kinase rio2 [Nicotiana tomentosiformis] ref|
JMFF033A15Sequence616003538 (6)gb|EYU22365.1|5e-95hypothetical protein MIMGU_mgv1a0228112mg, partial [Erythranthe guttata]711001143 (6)ref|XP_009630232.1|137PREDICTED: serine/threonine-protein kinase rio2 [Nicotiana tomentosiformis] ref|
JMSF004I07Sequence321003538 (6)gb|EYU22365.1|3e-23hypothetical protein MIMGU_mgv1a0228112mg, partial [Erythranthe guttata]264001143 (6)emb|CDP19085.1|3e-09unnamed protein product [Coffea canephora]
JMSF005J23Sequence282003538 (6)gb|EYU22365.1|4e-22hypothetical protein MIMGU_mgv1a0228112mg, partial [Erythranthe guttata]385001143 (6)emb|CDP19085.1|3e-17unnamed protein product [Coffea canephora]
JMSF033M11Sequence676003538 (6)ref|XP_002533337.1|1e-147serine/threonine-protein kinase rio2, putative [Ricinus communis] gb|EEF29046.1|740001143 (6)ref|XP_009630232.1|147PREDICTED: serine/threonine-protein kinase rio2 [Nicotiana tomentosiformis] ref|
JMSF039H01Sequence700003538 (6)ref|XP_002533337.1|3e-113serine/threonine-protein kinase rio2, putative [Ricinus communis] gb|EEF29046.1|720001143 (6)ref|XP_009630232.1|147PREDICTED: serine/threonine-protein kinase rio2 [Nicotiana tomentosiformis] ref|

Alignment

This contig is upended


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JMSF033M11+                          AGAACTTAAATATGCATTCAACATCACGGTCAAAGTACATTTGTG
                      ____________________________________________________________
consensus                            AGAACTTAAATATGCATTCAACATCACGGTCAAAGTACATTTGTG
 
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JMSF033M11+           CATTACGATGGGAGACTGAAACCATTTGTGGGAAATCAATCATTGTCACCTTCTCATCAT
                      ____________________________________________________________
consensus             CATTACGATGGGAGACTGAAACCATTTGTGGGAAATCAATCATTGTCACCTTCTCATCAT
 
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JMSF033M11+           CATTGATCATTATGTTAAACTCATTGAAATCACAGTGAATAAGCCCGTGTTCAGCCAAAC
                      ____________________________________________________________
consensus             CATTGATCATTATGTTAAACTCATTGAAATCACAGTGAATAAGCCCGTGTTCAGCCAAAC
 
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JMSF033M11+           GAACAACAATACCAAGGATGGTTTCAAAAACTGTGTCTGGGTTCTGCAATTGCTTCACCT
                      ____________________________________________________________
consensus             GAACAACAATACCAAGGATGGTTTCAAAAACTGTGTCTGGGTTCTGCAATTGCTTCACCT
 
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JMSF033M11+           GCACAAGCGGGTAGCCTTGAATGAGTGACATAATCACACAATGCCTGTTGCAATCAACAG
JMSF039H01+                               ATGAGTGACATAATCACACAATGCCTGTTGCAATCAACAG
                      ____________________________________________________________
consensus             GCACAAGCGGGTAGCCTTGAATGAGTGACATAATCACACAATGCCTGTTGCAATCAACAG
 
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JMSF033M11+           CATTTGGAACAGGAAATCCATGCTCTTCCAAAGCCTTCATAAAAGCAAATTCCTTGAGAG
JMFF033A15+                                             CTTCATAAAAGCAAATTCCTTGAGAG
JMSF039H01+           CATTTGGAACAGGAAATCCATGCTCTTCCAAAGCCTTCATAAAAGCAAATTCCTTGAGAG
                      ____________________________________________________________
consensus             CATTTGGAACAGGAAATCCATGCTCTTCCAAAGCCTTCATAAAAGCAAATTCCTTGAGAG
 
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JMSF033M11+           CAGCAAGTCGTGATAAGTAGAGCCAATTATAACTTCTACGATGCTTCAAATAGTCACGCT
JMFF033A15+           CAGCAAGTCGTGATAAGTAGAGCCAATTATAACTTCTACGATGCTTCAAATAGTCACGCT
JMSF039H01+           CAGCAAGTCGTGATAAGTAGAGCCAATTATAACTTCTACGATGCTTCAAATAGTCACGCT
                      ____________________________________________________________
consensus             CAGCAAGTCGTGATAAGTAGAGCCAATTATAACTTCTACGATGCTTCAAATAGTCACGCT
 
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JMSF033M11+           TGGATTTGACTGCCCTAAACGAAACCCTACCAAGCCTGTGCAGTTTCATCGCAAGAACAG
JMFF033A15+           TGGATTTGACTGCCCTAAACGAAACCCTACCAAGCCTGTGCAGTTTCATCGCAAGAACAG
JMFF026N07+                                             CCTGTGCAGTTTCATCGCAAGAACAG
JMSF039H01+           TGGATTTGACTGCCCTAAACGAAACCCTACCAAGCCTGTGCAGTTTCATCGCAAGAACAG
                      ____________________________________________________________
consensus             TGGATTTGACTGCCCTAAACGAAACCCTACCAAGCCTGTGCAGTTTCATCGCAAGAACAG
 
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JMSF033M11+           TACCATCCTCCGTGGCCACCTCAAAAATATCTGACTCTTTCCCAACACCAATTTGGCGAC
JMFF033A15+           TACCATCCTCCGTGGCCACCTCAAAAATATCTGACTCTTTCCCAACACCAATTTGGCGAC
JMFF026N07+           TACCATCCTCCGTGGCCACCTCAAAAATATCTGACTCTTTCCCAACACCAATTTGGCGAC
JMSF039H01+           TACCATCCTCCGTGGCCACCTCAAAAATATCTGACTCTTTCCCAACACCAATTTGGCGAC
                      ____________________________________________________________
consensus             TACCATCCTCCGTGGCCACCTCAAAAATATCTGACTCTTTCCCAACACCAATTTGGCGAC
 
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JMSF033M11+           CCACAGCAGTAAAAACTCCACGGTTAACCAAGGTCTTTATAGCAAGAAAATCATAGCCAA
JMFF033A15+           CCACAGCAGTAAAAACTCCACGGTTAACCAAGGTCTTTATAGCAAGAAAATCATAGCCAA
JMFF026N07+           CCACAGCAGTAAAAACTCCACGGTTAACCAAGGTCTTTATAGCAAGAAAATCATAGCCAA
JMSF039H01+           CCACAGCAGTAAAAACTCCACGGTTAACCAAGGTCTTTATAGCAAGAAAATCATAGCCAA
                      ____________________________________________________________
consensus             CCACAGCAGTAAAAACTCCACGGTTAACCAAGGTCTTTATAGCAAGAAAATCATAGCCAA
 
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JMSF033M11+           GGTAGGTAAGTCGAAAACCATCATATTTGGAAGCGTCATGGTGTAACAACTTGTGCTTAA
JMFF033A15+           GGTAGGTAAGTCGAAAACCATCATATTTGGAAGCGTCATGGTGTAACAACTTGTGCTTAA
JMFF026N07+           GGTAGGTAAGTCGAAAACCATCATATTTGGAAGCGTCATGGTGTAACAACTTGTGCTTAA
JMSF004I07+                                           GCGTCATGGTGTAACAACTTGTGCTTAA
JMSF039H01+           GGTAGGTAAGTCGAAAACCATCATATTTGGAAGCGTCATGGTGTAACAACTTGTGCTTAA
                      ____________________________________________________________
consensus             GGTAGGTAAGTCGAAAACCATCATATTTGGAAGCGTCATGGTGTAACAACTTGTGCTTAA
 
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JMSF033M11+           GCAAATTCTTCAACACCTTATAAGTTCCT                               
JMFF033A15+           GCAAATTCTTCAACACCTTATAAGTTCCTCCATGCTTGAGGGAAGCTATGCGATCAATCA
JMFF026N07+           GCAAATTCTTCAACACCTTATAAGTTCCTCCATGCTTGAGGGAAGCTATGCGATCAATCA
JMSF004I07+           GCAAATTCTTCAACACCTTATAAGTTCCTCCATGCTTGAGGGAAGCTATGCGATCAATCA
JMSF039H01+           GCAAATTCTTCAACACCTTATAAGTTCCTCCATGCTTGAGGGAAGCTATGCGATCAATCA
JMSF005J23+                             TATAAGTTCCTCCATGCTTGAGGGAAGCTATGCGATCAATCA
                      ____________________________________________________________
consensus             GCAAATTCTTCAACACCTTATAAGTTCCTCCATGCTTGAGGGAAGCTATGCGATCAATCA
 
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JMFF033A15+           ACTCCGTAGGAACAATCTCGTGGTTGCGCATTCCCATCTCGACGGCGGTGAGCACCCTGA
JMFF026N07+           ACTCCGTAGGAACAATCTCGTGGTTGCGCATTCCCATCTCGACGGCGGTGAGCACCCTGA
JMSF004I07+           ACTCCGTAGGAACAATCTCGTGGTTGCGCATTCCCATCTCGACGGCGGTGAGCACCCTGA
JMSF039H01+           ACTCCGTAGGAACAATCTCGTGGTTGCGCATTCCCATCTCGACGGCGGTGAGCACCCTGA
JMSF005J23+           ACTCCGTAGGAACAATCTCGTGGTTGCGCATTCCCATCTCGACGGCGGTGAGCACCCTGA
                      ____________________________________________________________
consensus             ACTCCGTAGGAACAATCTCGTGGTTGCGCATTCCCATCTCGACGGCGGTGAGCACCCTGA
 
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JMFF033A15+           AATCATCCTTTGATAGGTATCTGAGCGCGTTCACGTCCAACTTCATCCTCTTCTGATCTT
JMFF026N07+           AATCATCCTTTGATAGGTATCTGAGCGCGTTCACGTCCAACTTCATCCTCTTCTGATCTT
JMSF004I07+           AATCATCCTTTGATAGGTATCTGAGCGCGTTCACGTCCAACTTCATCCTCTTCTGATCTT
JMSF039H01+           AATCATCCTTTGATAGGTATCTGAGCGCGTTCACGTCCAACTTCATCCTCTTCTGATCTT
JMSF005J23+           AATCATCCTTTGATAGGTATCTGAGCGCGTTCACGTCCAACTTCATCCTCTTCTGATCTT
                      ____________________________________________________________
consensus             AATCATCCTTTGATAGGTATCTGAGCGCGTTCACGTCCAACTTCATCCTCTTCTGATCTT
 
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JMFF033A15+           TCTATTTCCGTTTCCTTTCGTGTAATTCTGATTGAAACTTTCCGGCACCGGCGGCGGTTG
JMFF026N07+           TCTATTTCCGTTTCCTTTCGTGTAATTCTGATTGAAACTTTCCGGCACCGGCGGCGGTTG
JMSF004I07+           TCTATTTCCGTTTCCTTTCGTGTAATTCTGATTGAAACTTTCCGGCACCGGCGGCGGTTG
JMSF039H01+           TCTATTTCCGTTTCCTTTCGTGTAATTCTGATTGAAACTTTCCGGCACCGGCGGCGGTTG
JMSF005J23+           TCTATTTCCGTTTCCTTTCGTGTAATTCTGATTGAAACTTTCCGGCACCGGCGGCGGTTG
                      ____________________________________________________________
consensus             TCTATTTCCGTTTCCTTTCGTGTAATTCTGATTGAAACTTTCCGGCACCGGCGGCGGTTG
 
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JMFF033A15+           GATGCGAAGCTCAATAGGTGCACCTATGGCAGCTCCGACTAGACAACTA           
JMFF026N07+           GATGCGAAGCTCAATAGGTGCACCTATGGCAGCTCCGACTAGACAACTAT          
JMSF004I07+           GATGCGAAGCTCAATAGGTGCACCTATGGCAGCTCCGACTAGACAACTAT          
JMSF039H01+           GATGCGAAGCTCAATAGGTGCACCTATGGCAGCTCCGACTAGACAACTATAC        
JMSF005J23+           GATGCGAAGCTCAATAGGTGCACCTATGGCAGCTCCGACTAGACAACTATACAAGTCCGC
                      ____________________________________________________________
consensus             GATGCGAAGCTCAATAGGTGCACCTATGGCAGCTCCGACTAGACAACTATACAAGTCCGC