| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004B05 | Sequence | 541 | 003531 (5) | ref|XP_009775818.1| | 2e-56 | PREDICTED: probable mitochondrial-processing peptidase subunit beta [Nicotiana | 583 | 001026 (6) | ref|XP_011085735.1| | 4e-36 | PREDICTED: probable mitochondrial-processing peptidase subunit beta [Sesamum in |
| JMFS119H07 | Sequence | 609 | 003531 (5) | ref|XP_009610110.1| | 5e-71 | PREDICTED: probable mitochondrial-processing peptidase subunit beta [Nicotiana | |||||
| JMSF004L06 | Sequence | 437 | 003531 (5) | ref|XP_009775818.1| | 5e-35 | PREDICTED: probable mitochondrial-processing peptidase subunit beta [Nicotiana | 262 | 001026 (6) | |||
| JMSF015B20 | Sequence | 231 | 003531 (5) | 686 | 001026 (6) | emb|CBI22296.3| | 1e-62 | unnamed protein product [Vitis vinifera] | |||
| JMSF022J15 | Sequence | 656 | 003531 (5) | ref|XP_009610110.1| | 9e-77 | PREDICTED: probable mitochondrial-processing peptidase subunit beta [Nicotiana | 653 | 001026 (6) | emb|CBI22296.3| | 2e-55 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
JMSF022J15+ ATCCTCGAACTTCGGGTTCTGCA
____________________________________________________________
consensus ATCCTCGAACTTCGGGTTCTGCA
. : . : . : . : . : . :
JMSF022J15+ CTATGTCAGATAGAAGTTGGAGCGCCCTGGTCACGTCCTTGCTCTGGACTTTGGCACAGT
JMFS119H07+ GTCACGTCCTTGCTCTGGACTTTGGCACAGT
____________________________________________________________
consensus CTATGTCAGATAGAAGTTGGAGCGCCCTGGTCACGTCCTTGCTCTGGACTTTGGCACAGT
. : . : . : . : . : . :
JMSF022J15+ ACGTGGTCATTTCCCTAGAAGTGGAACCACTAATGTGCCCTCCCATGTTCTCAACCTCCT
JMFS119H07+ ACGTGGTCATTTCCCTAGAAGTGGAACCACTAATGTGCCCTCCCATGTTCTCAACCTCCT
JMFF004B05+ CT
____________________________________________________________
consensus ACGTGGTCATTTCCCTAGAAGTGGAACCACTAATGTGCCCTCCCATGTTCTCAACCTCCT
. : . : . : . : . : . :
JMSF022J15+ CCTCAACGGCCTTGGGTAGCCGCTTCTCGGTCCCTTTGAAGATCAAATGCTCGAGAAAAT
JMFS119H07+ CCTCAACGGCCTTGGGTAGCCGCTTCTCGGTCCCTTTGAAGATCAAATGCTCGAGAAAAT
JMFF004B05+ CCTCAACGGCCTTGGGTAGCCGCTTCTCGGTCCCTTTGAAGATCAAATGCTCGAGAAAAT
____________________________________________________________
consensus CCTCAACGGCCTTGGGTAGCCGCTTCTCGGTCCCTTTGAAGATCAAATGCTCGAGAAAAT
. : . : . : . : . : . :
JMSF022J15+ GCGCCACGCCGTTGTTGTCATCAGTCTCGAACCGAGACCCGGCGTCGATCGACACACCTA
JMFS119H07+ GCGCCACGCCGTTGTTGTCATCAGTCTCGAACCGAGACCCGGCGTCGATCGACACACCTA
JMFF004B05+ GCGCCACGCCGTTGTTGTCATCAGTCTCGAACCGAGACCCGGCGTCGATCGACACACCTA
JMSF004L06+ GTCGATCGACACACCTA
____________________________________________________________
consensus GCGCCACGCCGTTGTTGTCATCAGTCTCGAACCGAGACCCGGCGTCGATCGACACACCTA
. : . : . : . : . : . :
JMSF022J15+ TGGCTGCGGTCTTCGCGGCGAGATTAGACTCGGTGGCCACACGTAAGCCGTTAGGGAGAG
JMFS119H07+ TGGCTGCGGTCTTCGCGGCGAGATTAGACTCGGTGGCCACACGTAAGCCGTTAGGGAGAG
JMFF004B05+ TGGCTGCGGTCTTCGCGGCGAGATTAGACTCGGTGGCCACACGTAAGCCGTTAGGGAGAG
JMSF004L06+ TGGCTGCCGTCTTCGCGGCGAGATTAGACTCGGTGGCCACACGTAAGCCGTTAGGGAGAG
____________________________________________________________
consensus TGGCTGCGGTCTTCGCGGCGAGATTAGACTCGGTGGCCACACGTAAGCCGTTAGGGAGAG
. : . : . : . : . : . :
JMSF022J15+ TGGTGACTTTAGTCTCCGGGACGGAGAGGATCGAGGTGTGATCGGTTTGAATCGGGTGGG
JMFS119H07+ TGGTGACTTTAGTCTCCGGGACGGAGAGGATCGAGGTGTGATCGGTTTGAATCGGGTGGG
JMFF004B05+ TGGTGACTTTAGTCTCCGGGACGGAGAGGATCGAGGTGTGATCGGTTTGAATCGGGTGGG
JMSF004L06+ TGGTGACTTTAGTCTCCGGGACGGAGAGGATCGAGGTGTGATCGGTTTGAATCGGGTGGG
____________________________________________________________
consensus TGGTGACTTTAGTCTCCGGGACGGAGAGGATCGAGGTGTGATCGGTTTGAATCGGGTGGG
. : . : . : . : . : . :
JMSF022J15+ GGGAATTGTGCTGGAGGAACCTCGGGTCGGGTGTCTCGAGTTTCCTGAGCTTGGATTTCA
JMFS119H07+ GGGAATTGTGCTGGAGGAACCTCGGGTCGGGTGTCTCGAGTTTCCTGAGCTTGGATTTCA
JMFF004B05+ GGGAATTGTGCTGGAGGAACCTCGGGTCGGGTGTCTCGAGTTTCCTGAGCTTGGATTTCA
JMSF004L06+ GGGAATTGTGCTGGAGGAACCTCGGGTCGGGTGTCTCGAGTTTCCTGAGCTTGGATTTCA
____________________________________________________________
consensus GGGAATTGTGCTGGAGGAACCTCGGGTCGGGTGTCTCGAGTTTCCTGAGCTTGGATTTCA
. : . : . : . : . : . :
JMSF022J15+ CCCGCTCGGCTAAGCGATCGTAGATCATGAGGTCCGGAGGAGGTGGGGAGGGTGGTGCCG
JMFS119H07+ CCCGCTCGGCTAAGCGATCGTAGATCATGAGGTCCGGAGGAGGTGGGGAGGGTGGTGCCG
JMFF004B05+ CCCGCTCGGCTAAGCGATCGTAGATCATGAGGTCCGGAGGAGGTGGGGAGGGTGGTGCCG
JMSF015B20+ CTAAGCGATCGTAGATCATGAGGTCCGGAGGAGGTGGGGAGGGTGGTGCCG
JMSF004L06+ CCCGCTCGGCTAAGCGATCGTAGATCATGAGGTCCGGAGGAGGTGGGGAGGGTGGTGCCG
____________________________________________________________
consensus CCCGCTCGGCTAAGCGATCGTAGATCATGAGGTCCGGAGGAGGTGGGGAGGGTGGTGCCG
. : . : . : . : . : . :
JMSF022J15+ GAGCTTCCGCAGCCTGAGCTAACTGGGAGGCGAAACGCGTGGGTTGAGTCAGGCATGGCG
JMFS119H07+ GAGCTTCCGCAGCCTGAGCTAACTGGGAGGCGAAACGCGTGGGTTGAGTCAGGCATGGCG
JMFF004B05+ GAGCTTCCGCAGCCTGAGCTAACTGGGAGGCGAAACGCGTGGGTTGAGTCAGGCATGGCG
JMSF015B20+ GAGCTTCCGCAGCCTGAGCTAACTGGGAGGCGAAACGCGTGGGTTGAGTCAGGCATGGCG
JMSF004L06+ GAGCTTCCGCAGCCTGAGCTAACTGGGAGGCGAAACGCGTGGGTTGAGTCAGGCATGGCG
____________________________________________________________
consensus GAGCTTCCGCAGCCTGAGCTAACTGGGAGGCGAAACGCGTGGGTTGAGTCAGGCATGGCG
. : . : . : . : . : . :
JMSF022J15+ CAGTCAGGTGCCGAGAGCGGCGCGTGAAAGAAAAGAGGTGGCGCGTTGTCATTCCTCCGT
JMFS119H07+ CAGTCAGGTGCCGAGAGCGGCGCGTGAAAGAAAAGAGGTGGCGCGTTGTCATTCCTCCGT
JMFF004B05+ CAGTCAGGTGCCGAGAGCGGCGCGTGAAAGAAAAGAGGTGGCGCGTTGTCATTCCTCCGT
JMSF015B20+ CAGTCAGGTGCCGAGAGCGGCGCGTGAAAGAAAAGAGGTGGCGCGTTGTCATTCCTCCGT
JMSF004L06+ CAGTCAGGTGCCGAGAGCGGCGCGTGAAAGAAAAGAGGTGGCGCGTTGTCATTCCTCCGT
____________________________________________________________
consensus CAGTCAGGTGCCGAGAGCGGCGCGTGAAAGAAAAGAGGTGGCGCGTTGTCATTCCTCCGT
. : . : . : . : . : . :
JMSF022J15+ TGTTCCAATTCGAGCTGTTTTTTCAGTTGAGC
JMFS119H07+ TGTTCCAATTCGAGCTGTTTTTTCAGTTGAGCGACGGA
JMFF004B05+ TGTTCCAATTCGAGCTGTTTTTTCAGTTGAGCGACGGAGATGAGAATGGAGAAGAAGA
JMSF015B20+ TGTTCCAATTCGAGCTGTTTTTTCAGTTGAGCGACGGAGATGAGAATGGAGAAGAAGA
JMSF004L06+ TGTTCCAATTCGAGCTGTTTTTTCAGTTGAGCGACGGAGATGAGAATGGAGAAGAAGATC
____________________________________________________________
consensus TGTTCCAATTCGAGCTGTTTTTTCAGTTGAGCGACGGAGATGAGAATGGAGAAGAAGATC