Contig 003528:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004E12Sequence382003528 (2)gb|AAS79605.1|5e-61putative tRNA isopentenylpyrophosphatase [Ipomoea trifida]441013898 (3)gb|AAS79605.1|2e-46putative tRNA isopentenylpyrophosphatase [Ipomoea trifida]
JMSF009F12Sequence366003528 (2)gb|AAS79605.1|4e-64putative tRNA isopentenylpyrophosphatase [Ipomoea trifida]824013898 (3)gb|AAS79605.1|7e-60putative tRNA isopentenylpyrophosphatase [Ipomoea trifida]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF009F12+ CAATGACAGGCAGGAAATTACGGGATGATATT
JMSF004E12+ CAGGAAATTACGGGATGATATT
                      ____________________________________________________________
consensus CAATGACAGGCAGGAAATTACGGGATGATATT
 
. : . : . : . : . : . :
JMSF009F12+ TCATCAATGAGAGGAATAGCATGATCGCGAAAATCCTTTGCCGTAAATTCTACATTCGAG
JMSF004E12+ TCATCAATGAGAGGAATAGCATGATCGCGAAAATCCTTTGCCGTAAATTCTACATTCGAG
                      ____________________________________________________________
consensus TCATCAATGAGAGGAATAGCATGATCGCGAAAATCCTTTGCCGTAAATTCTACATTCGAG
 
. : . : . : . : . : . :
JMSF009F12+ CTGATGGTACCAAGAAGATGATGTACCACGCCTTTCTGCTCTTCAGGACGGACTTTATTG
JMSF004E12+ CTGATGGTACCAAGAAGATGATGTACCACGCCTTTCTGCTCTTCAGGACGGACTTTATTG
                      ____________________________________________________________
consensus CTGATGGTACCAAGAAGATGATGTACCACGCCTTTCTGCTCTTCAGGACGGACTTTATTG
 
. : . : . : . : . : . :
JMSF009F12+ GTTAGCACATCTAATCCTTGGTAAACCTGCATGGAATCGGCATTGATGACTTGAACAGGG
JMSF004E12+ GTTAGCACATCTAATCCTTGGTAAACCTGCATGGAATCGGCATTGATGACTTGAACAGGG
                      ____________________________________________________________
consensus GTTAGCACATCTAATCCTTGGTAAACCTGCATGGAATCGGCATTGATGACTTGAACAGGG
 
. : . : . : . : . : . :
JMSF009F12+ AAGTGGGAAGCAAGGTCGATGGCGAGTTTGGATTTTCCGGCCCCTGTTGCTCCCATTATC
JMSF004E12+ AAGTGGGAAGCAAGGTCGATGGCGAGTTTGGATTTTCCGGCCCCTGTTGCTCCCATTATC
                      ____________________________________________________________
consensus AAGTGGGAAGCAAGGTCGATGGCGAGTTTGGATTTTCCGGCCCCTGTTGCTCCCATTATC
 
. : . : . : . : . : . :
JMSF009F12+ ACTATTACCTTAGGCTTCGAATTTGAATTTGAACTCAGATTCTCGTTTAGCATCTTCCCT
JMSF004E12+ ACTATTACCTTAGGCTTCGAATTTGAATTTGAACTCAGATTCTCGTTTAGCATCTTCCCT
                      ____________________________________________________________
consensus ACTATTACCTTAGGCTTCGAATTTGAATTTGAACTCAGATTCTCGTTTAGCATCTTCCCT
 
. : . : . : . : . : . :
JMSF009F12+ GCGCCCGGGAATTCGGTTTGAATTTCCATCGTT
JMSF004E12+ GCGCCCGGGAATTCGGTTTGAATTTCCATCGTTAGGGTTTCTGGTCCTCCACTCCATGCC
                      ____________________________________________________________
consensus GCGCCCGGGAATTCGGTTTGAATTTCCATCGTTAGGGTTTCTGGTCCTCCACTCCATGCC