| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF023K05 | Sequence | 503 | 003513 (12) | ref|XP_006292807.1| | 4e-92 | hypothetical protein CARUB_v10019058mg [Capsella rubella] gb|EOA25705.1| hypothe | 747 | 014855 | gb|AFW78488.1| | 3e-85 | calmodulin1 [Zea mays] |
| JMFF050F22 | Sequence | 617 | 003513 (12) | ref|XP_003632230.1| | 2e-99 | PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera] | 573 | 003513 (12) | gb|AFW78488.1| | 8e-61 | calmodulin1 [Zea mays] |
| JMFN005D08 | Sequence | 614 | 003513 (12) | ref|XP_003632230.1| | 4e-101 | PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera] | |||||
| JMFN015F10 | Sequence | 626 | 003513 (12) | ref|XP_003632230.1| | 4e-101 | PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera] | |||||
| JMSF002I23 | Sequence | 251 | 003513 (12) | gb|AAB31257.1| | 1e-11 | calmodulin homolog {EST} [Brassica napus, Naehan, root, Peptide Partial, 53 aa] | 718 | 003513 (12) | ref|XP_003632230.1| | 1e-100 | PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera] |
| JMSF014K05 | Sequence | 511 | 003513 (12) | ref|XP_006295105.1| | 8e-78 | hypothetical protein CARUB_v10024180mg [Capsella rubella] gb|EOA28003.1| hypothe | 808 | 003513 (12) | ref|XP_003632230.1| | 4e-100 | PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera] |
| JMSF016K05 | Sequence | 210 | 003513 (12) | ||||||||
| JMSF036K01 | Sequence | 626 | 003513 (12) | ref|XP_003632230.1| | 4e-101 | PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera] | 716 | 003513 (12) | ref|XP_003632230.1| | 1e-100 | PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
rJMFF050F22- CCAATTGAGAACATTATATTTAGACAATAAATAAGTTCAGATAC
____________________________________________________________
consensus CCAATTGAGAACATTATATTTAGACAATAAATAAGTTCAGATAC
. : . : . : . : . : . :
rJMFF050F22- AAGAGTCAGAAGACGCATCGTCAAAGGAGGATGAAAAGTTCTTGCCACCCTTTGCCGTAG
rJMSF036K01- AGAGTCAGAAGACGCATCGTCAAAGGAGGATGAAAAGTTCTTGCCACCCTTTGCCGTAG
rJMSF002I23- AGAGTCAGAAGACGCATCGTCAAAGGAGGATGAAAAGTTCTTGCCACCCTTTGCCGTAG
____________________________________________________________
consensus AAGAGTCAGAAGACGCATCGTCAAAGGAGGATGAAAAGTTCTTGCCACCCTTTGCCGTAG
. : . : . : . : . : . :
rJMSF016K05- TTGATTCAAGGTCCAACTCCGACCCAGCAAACCATTCAAAACAAAACAGAA
rJMFF050F22- AGAAATACGTTGATTCAAGGTCCAACTCCAACCCA-CAAACCATTCAAAACAAAACAGAA
rJMSF036K01- AGAAATACGTTGATTCAAGGTCCAACTCCAACCCA-CAAACCATTCAAAACAAAACAGAA
rJMSF002I23- AGAAATACGTTGATTCAAGGTCCAACTCCAACCCA-CAAACCATTCAAAACAAAACAGAA
____________________________________________________________
consensus AGAAATACGTTGATTCAAGGTCCAACTCCAACCCA-CAAACCATTCAAAACAAAACAGAA
. : . : . : . : . : . :
rJMSF016K05- AAAGAAAGACTCCTAGTGCACTATATTAGCTGAACCGTCGTCCATCAAGTTTTAGGTCTT
rJMFF050F22- AAAGAAAGACTCCAAGTGCACTATATTAGCTGAACCGTCGTCCATCAAGTTTTAGGTCTT
rJMSF036K01- AAAGAAAGACTCCAAGTGCACTATATTAGCTGAACCGTCGTCCATCAAGTTTTAGGTCTT
rJMSF002I23- AAAGAAAGACTCCAAGTGCACTATATTAGCTGAACCGTCGTCCATCAAGTTTTAGGTCTT
JMFN005D08+ GTCGTCCATCAAGTTTAGGTTCTT
JMFF050F22+ TAGGTCTT
JMFN015F10+ CATCAAGTTTTAGGTCTT
____________________________________________________________
consensus AAAGAAAGACTCCAAGTGCACTATATTAGCTGAACCGTCGTCCATCAAGTTTTAGGTCTT
. : . : . : . : . : . :
rJMSF016K05- CTTTGCAGATTTCAGCGNGGNAAAAATAGAAAGATTTAAGGGAGATGGGGAANCACTTGG
rJMFF050F22- CTTTGCAGATTTCAGCGTGGTAAAAATAGAAAGATTTAAGGGAGATGGGGAATCACTTGG
rJMSF036K01- CTTTGCAGATTTCAGCGTGGTAAAAATAGAAAGATTTAAGGGAGATGGGGAATCACTTGG
JMSF036K01+ TTTGCAGATTTCAGCGTGGTAAAAATAGAAAGATTTAAGGGAGATGGGGAATCACTTGG
rJMSF002I23- CTTTGCAGATTTCAGCGTGGTAAAAATAGAAAGATTTAAGGGAGATGGGGAATCACTTGG
JMFN005D08+ CTTGNCAGATTTCAGCGTGGTAAAAATAGAAAGATTTAAGGGAGATGGGGAATCACTTGG
JMFF050F22+ CTTGGCAGATTTCAGCGTGGTAAAAATAGAAAGATTTAAGGGAGATGGGGAATCACTTGG
JMFN015F10+ CTTTGCAGATTTCAGCGTGGTAANAATAGAAAGATTTAAGGGAGATGGGGAATCACTTGG
rJMSF014K05- AATCACTTGG
____________________________________________________________
consensus CTTTGCAGATTTCAGCGTGGTAAAAATAGAAAGATTTAAGGGAGATGGGGAATCACTTGG
. : . : . : . : . : . :
rJMSF016K05- CCATCNTAACCTTAACGAACTCCTCGTA
rJMFF050F22- CCATCATAACCTTAACGAACTCCTCGTAGTTTATTTGCCCATCACCATCAACGTCAGCCT
rJMSF036K01- CCATCATAACCTTAACGAACTCCTCGTAGTTTATTTGCCCATCACCATCAACGTCAGCCT
JMSF036K01+ CCATCATAACCTTAACGAACTCCTCGTAGTTTATTTGCCCATCACCATCAACGTCAGCCT
rJMSF002I23- CCATCATAACCTTAACGAACTCCTCGTAGTTTATTTGCCCATCACCATCAACGTCAGCCT
JMFN005D08+ CCATCATAACCTTAACGAACTCCTCGTAGTTTATTTGCCCATCACCATCAACGTCAGCCT
JMFF050F22+ CCATCATAACCTTAACGAACTCCTCGTAGTTTATNTGCCCATCACCATCAACGTCAGCCT
JMFF023K05+ TTTATTTGCCCATCACCATCAACGTCAGCCT
JMFN015F10+ CCATCATAACCTTAACGAACTCCTCGTAGTTTATTTGCCCATCACCATCAACGTCAGCCT
rJMSF014K05- CCATCATAACCTTAACGAACTCCTCGTAGTTTATTTGCCCATCACCATCAACGTCAGCCT
____________________________________________________________
consensus CCATCATAACCTTAACGAACTCCTCGTAGTTTATTTGCCCATCACCATCAACGTCAGCCT
. : . : . : . : . : . :
rJMFF050F22- CCCGAATCATCTCATCAACTTCTTCATCGGTCAGCTTCTCCCCAAGGTTTGTCATCACGT
rJMSF036K01- CCCGAATCATCTCATCAACTTCTTCATCGGTCAGCTTCTCCCCAAGGTTTGTCATCACGT
JMSF036K01+ CCCGAATCATCTCATCAACTTCTTCATCGGTCAGCTTCTCCCCAAGGTTTGTCATCACGT
rJMSF002I23- CCCGAATCATCTCATCAACTTCTTCATCGGTCAGCTTCTCCCCAAGGTTTGTCATCACGT
JMFN005D08+ CCCGAATCATCTCATCAACTTCTTCATCGGTCAGCTTCTCCCCAAGGTTTGTCATCACGT
JMFF050F22+ CCCGAATCATCTCATCAACTTCTTCATCGGTCAGCTTCTCCCCAAGGTTTGTCATCACGT
JMFF023K05+ CCCGAATCATCTCATCAACTTCTTCATCGGTCAGCTTCTCCCCAAGGTTTGTCATCACGT
JMFN015F10+ CCCGAATCATCTCATCAACTTCTTCATCGGTCAGCTTCTCCCCAAGGTTTGTCATCACGT
rJMSF014K05- CCCGAATCATCTCATCAACTTCTTCATCGGTCAGCTTCTCCCCAAGGTTTGTCATCACGT
JMSF014K05+ CGGTCAGCTTCTCCCCAAGGTTTGTCATCACGT
____________________________________________________________
consensus CCCGAATCATCTCATCAACTTCTTCATCGGTCAGCTTCTCCCCAAGGTTTGTCATCACGT
. : . : . : . : . : . :
rJMFF050F22- GGCGAAGCTCAGCGGCAGAGATGAAACCGTTATGGTCCTTGTCAAAAACTCTGAATGCTT
rJMSF036K01- GGCGAAGCTCAGCGGCAGAGATGAAACCGTTCTGGTCCTTGTCAAAAACTCTGAATGCTT
JMSF036K01+ GGCGAAGCTCAGCGGCAGAGATGAAACCGTTCTGGTCCTTGTCAAAAACTCTGAATGCTT
rJMSF002I23- GGCGAAGCTCAGCGGCAGAGATGAAACCGTTCTGGTCCTTGTCAAAAACTCTGAATGCTT
JMFN005D08+ GGCGAAGCTCAGCGGCAGAGATGAAACCGTTCTGGTCCTTGTCAAAAACTCTGAATGCTT
JMFF050F22+ GGCGAAGCTCAGCGGCAGAGATGAAACCGTTATGGTCCTTGTCAAAAACTCTGAATGCTT
JMFF023K05+ GGCGAAGCTCAGCGGCAGAGATGAAACCGTTCTGGTCCTTGTCAAAAACTCTGAATGCTT
JMFN015F10+ GGCGAAGCTCAGCGGCAGAGATGAAACCGTTCTGGTCCTTGTCAAAAACTCTGAATGCTT
rJMSF014K05- GGCGAAGCTCAGCGGCAGAGATGAAACCGTTCTGGTCCTTGTCAAAAACTCTGAATGCTT
JMSF014K05+ GGCGAAGCTCAGCGGCAGAGATGAAACCGTTCTGGTCCTTGTCAAAAACTCTGAATGCTT
____________________________________________________________
consensus GGCGAAGCTCAGCGGCAGAGATGAAACCGTTCTGGTCCTTGTCAAAAACTCTGAATGCTT
. : . : . : . : . : . :
rJMFF050F22- CTTTCAGCTCCTCCTCGGAATCAGTATCCTTCATCTTCCTGGCCATGAGATTTAAAAACT
rJMSF036K01- CTTTCAGCTCCTCCTCGGAATCAGTATCCTTCATCTTCCTGGCCATGAGATTTAAAAACT
JMSF036K01+ CTTTCAGCTCCTCCTCGGAATCAGTATCCTTCATCTTCCTGGCCATGAGATTTAAAAACT
rJMSF002I23- CTTTCAGCTCCTCCTCGGAATCAGTATCCTTCATCTTCCTGGCCATGAGATTTAAAAACT
JMFN005D08+ CTTTCAGCTCCTCCTCGGAATCAGTATCCTTCATCTTCCTGGCCATGAGATTTAAAAACT
JMFF050F22+ CTTTCAGCTCCTCCTCGGAATCAGTATCCTTCATCTTCCTGGCCATGAGATTTAAAAACT
JMFF023K05+ CTTTCAGCTCCTCCTCGGAATCAGTATCCTTCATCTTCCTGGCCATGAGATTTAAAAACT
JMFN015F10+ CTTTCAGCTCCTCCTCGGAATCAGTATCCTTCATCTTCCTGGCCATGAGATTTAAAAACT
rJMSF014K05- CTTTCAGCTCCTCCTCGGAATCAGTATCCTTCATCTTCCTGGCCATGAGATTTAAAAACT
JMSF014K05+ CTTTCAGCTCCTCCTCGGAATCAGTATCCTTCATCTTCCTGGCCATGAGATTTAAAAACT
____________________________________________________________
consensus CTTTCAGCTCCTCCTCGGAATCAGTATCCTTCATCTTCCTGGCCATGAGATTTAAAAACT
. : . : . : . : . : . :
rJMFF050F22- CTGGGAAGTCAATAGTTCCATTGCCATCAGCATCAACTTCATTTATCATG
rJMSF036K01- CTGGGAAGTCAATAGTTCCATTGCCATCAGCATCAACTTCATTTATCATGTCCTGGAGCT
JMSF036K01+ CTGGGAAGTCAATAGTTCCATTGCCATCAGCATCAACTTCATTTATCATGTCCTGGAGCT
rJMSF002I23- CTGGGAAGTCAATAGTTCCATTGCCATCAGCATCAACTTCATTTATCATGTCCTGGAGCT
JMFN005D08+ CTGGGAAGTCAATAGTTCCATTGCCATCAGCATCAACTTCATTTATCATGTCCTGGAGCT
JMFF050F22+ CTGGGAAGTCAATAGTTCCATTGCCATCAGCATCAACTTCATTTATCATGTCCTGGAGCT
JMFF023K05+ CTGGGAAGTCAATAGTTCCATTGCCATCAGCATCAACTTCATTTATCATGTCCTGGAGCT
JMFN015F10+ CTGGGAAGTCAATAGTTCCATTGCCATCAGCATCAACTTCATTTATCATGTCCTGGAGCT
rJMSF014K05- CTGGGAAGTCAATAGTTCCATTGCCATCAGCATCAACTTCATTTATCATGTCCTGGAGCT
JMSF014K05+ CTGGGAAGTCAATAGTTCCATTGCCATCAGCATCAACTTCATTTATCATGTCCTGGAGCT
____________________________________________________________
consensus CTGGGAAGTCAATAGTTCCATTGCCATCAGCATCAACTTCATTTATCATGTCCTGGAGCT
. : . : . : . : . : . :
rJMSF036K01- CAGCTTCAGTAGGATTCTGCCCTAATGACCTCATTACAGTCCCAAGCTCCTTGGTAGTGA
JMSF036K01+ CAGCTTCAGTAGGATTCTGCCCTAATGACCTCATTACAGTCCCAAGCTCCTTGGTAGTGA
rJMSF002I23- CAGCTTCAGTAGGATTCTGCCCTAATGACCTCATTACAGTCCCAAGCTCCTTGGTAGTGA
JMFN005D08+ CAGCTTCAGTAGGATTCTGCCCTAATGACCTCATTACAGTCCCAAGCTCCTTGGTAGTGA
JMFF050F22+ CAGCTTCAGTAGGATTCTGCCCTAATGACCTCATTACAGTCCCAAGCTCCTTGGTAGTGA
JMFF023K05+ CAGCTTCAGTAGGATTCTGCCCTAATGACCTCATTACAGTCCCAAGCTCCTTGGTAGTGA
JMFN015F10+ CAGCTTCAGTAGGATTCTGCCCTAATGACCTCATTACAGTCCCAAGCTCCTTGGTAGTGA
rJMSF014K05- CAGCTTCAGTAGGATTCTGCCCTAATGACCTCATTACAGTCCCAAGCTCCTTGGTAGTGA
JMSF014K05+ CAGCTTCAGTAGGATTCTGCCCTAATGACCTCATTACAGTCCCAAGCTCCTTGGTAGTGA
JMSF002I23+ CCTTGGTAGTGA
____________________________________________________________
consensus CAGCTTCAGTAGGATTCTGCCCTAATGACCTCATTACAGTCCCAAGCTCCTTGGTAGTGA
. : . : . : . : . : . :
rJMSF036K01- TGCAACCGTCGCCGTCCTTGTCGAAGAGACTGAAGGCCTCCTTGAACTCAGAGATCTGAT
JMSF036K01+ TGCAACCGTCGCCGTCCTTGTCGAAGAGACTGAAGGCCTCCTTGAACTCAGAGATCTGAT
rJMSF002I23- TGCAACCGTCGCCGTCCTTGTCGAAGAGACTGAAGGCCTCCTTGAACTCAGAGATCTGAT
JMFN005D08+ TGCAACCGTCGCCGTCCTTGTCGAAGAGACTGAAGGCCTCCTTGAACTCAGAGATCTGAT
JMFF050F22+ TGCAACCGTCGCCGTCCTTGTCGAAGAGACTGAAGGCCTCCTTGAACTCAGAGATCTGAT
JMFF023K05+ TGCAACCGTCGCCGTCCTTGTCGAAGAGACTGAAGGCCTCCTTGAACTCAGAGATCTGAT
JMFN015F10+ TGCAACCGTCGCCGTCCTTGTCGAAGAGACTGAAGGCCTCCTTGAACTCAGAGATCTGAT
rJMSF014K05- TGCAACCGTCGCCGTCCTTGTCGAAGAGACTGAAGGCCTCCTTGAACTCAGAGATCTGAT
JMSF014K05+ TGCAACCGTCGCCGTCCTTGTCGAAGAGACTGAAGGCCTCCTTGAACTCAGAGATCTGAT
JMSF002I23+ TGCAACCGTCGCCGTCCTTGTCGAAGAGACTGAAGGCCTCCTTGAACTCAGAGATCTGAT
____________________________________________________________
consensus TGCAACCGTCGCCGTCCTTGTCGAAGAGACTGAAGGCCTCCTTGAACTCAGAGATCTGAT
. : . : . : . : . : . :
rJMSF036K01- CGTCAGTGAGCTGATCCGCCATTTCTGGTACTCGTTAGCTCTACGAAAAA
JMSF036K01+ CGTCAGTGAGCTGATCCGCCATT
rJMSF002I23- CGTCAGTGAGCTGATCCGCCATTTCTGGTACTCGTTAGCTCTACG-AAAAAACTGAAAGA
JMFN005D08+ CGTCAGTGAGCTGATCCGCCATTTCTGGTACTCGTTAGCTCTACG-AAAAAACTGAAAGA
JMFF050F22+ CGTCAGTGAGCTGATCCGCCATTTCTGGTACTCGTTAGCTCTACG-AAAAAACTGAAAGA
JMFF023K05+ CGTCAGTGAGCTGATCCGCCATTTCTGGTACTCGTTAGCTCTACGAAAAAAACTGAAAGA
JMFN015F10+ CGTCAGTGAGCTGATCCGCCATTTCTGGTACTCGTTAGCTCTACG-AAAAAACTGAAAGA
rJMSF014K05- CGTCAGTGAGCTGATCCGCCATTTCTGGTACTCGTTAGCTCTACG-AAAAAACTGAAAGA
JMSF014K05+ CGTCAGTGAGCTGATCCGCCATTTCTGGTACTCGTTAGCTCTACG-AAAAAACTGAAAGA
JMSF002I23+ CGTCAGTGAGCTGATCCGCCATTTCTGGTACTCGTTAGCTCTACG-AAAAAACTGAAAGA
____________________________________________________________
consensus CGTCAGTGAGCTGATCCGCCATTTCTGGTACTCGTTAGCTCTACG-AAAAAACTGAAAGA
. : . : . : . : . : . :
rJMSF002I23- G
JMFN005D08+ GGAAGTCGAGCGAGAGAGAGGAGGAGAGGAATATAGATAGAGAGAGAGAAA
JMFF050F22+ GGAAGTCGAGCGAGAGAGAGGGGGAGAGGAATATAGATAGAGAGAGAGAAAC
JMFF023K05+ GGAAGTCGAGCGAGAGAGAGGAGGAGAGGAATATAGATAGAGAGAGAGAAAC
JMFN015F10+ GGAAGTCGAGCGAGAGAGAGGAGGAGAGGAATATAGATAGAGAGAGAGAAACGGTTA
rJMSF014K05- GGAAGTCGAGCGAGAGAGAGGAGGAGAGGAATATAGATAGAGAGAGAGAAACGGTTATGG
JMSF014K05+ GGAAGTCGAGCGAGAGAGAGGAGGAGAGGAATATAGATAGAGAGAGAGAAACGGTTATGG
JMSF002I23+ GGAAGTCGAGCGAGAGAGAGGAGGAGAGGAATATAGATAGAGAGAGAGAAACGGTTATGG
____________________________________________________________
consensus GGAAGTCGAGCGAGAGAGAGGAGGAGAGGAATATAGATAGAGAGAGAGAAACGGTTATGG
. : . : . : . : . : . :
rJMSF014K05- AAGTGGGAGATTGATCAGT
JMSF014K05+ AAGTGGGAGATTGATCAGTTTTGTGTCGCCTCTTGGATTTTGGACAGAGGAGAGGTACC
JMSF002I23+ AAGTGGGAGATTGATCAGTTTTGTGTCGCCTCTTGGATTTTGGACAGAGGAGAGGTACCC
____________________________________________________________
consensus AAGTGGGAGATTGATCAGTTTTGTGTCGCCTCTTGGATTTTGGACAGAGGAGAGGTACCC