| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS067F09 | Sequence | 622 | 003503 (4) | ref|XP_009623718.1| | 8e-78 | PREDICTED: ribonuclease II, chloroplastic/mitochondrial isoform X1 [Nicotiana t | |||||
| JMFS112H07 | Sequence | 627 | 003503 (4) | ref|XP_009758864.1| | 1e-81 | PREDICTED: ribonuclease II, chloroplastic/mitochondrial isoform X3 [Nicotiana s | |||||
| JMSF001L06 | Sequence | 389 | 003503 (4) | ref|XP_009623718.1| | 4e-20 | PREDICTED: ribonuclease II, chloroplastic/mitochondrial isoform X1 [Nicotiana t | 696 | 005586 (2) | ref|XP_009758865.1| | 5e-44 | PREDICTED: ribonuclease II, chloroplastic/mitochondrial isoform X4 [Nicotiana s |
| JMSF037C08 | Sequence | 644 | 003503 (4) | ref|XP_009623718.1| | 2e-70 | PREDICTED: ribonuclease II, chloroplastic/mitochondrial isoform X1 [Nicotiana t | 697 | 005586 (2) | ref|XP_009758865.1| | 5e-45 | PREDICTED: ribonuclease II, chloroplastic/mitochondrial isoform X4 [Nicotiana s |
This contig is upended
. : . : . : . : . : . :
JMFS112H07+ TCATCTCAGCCAGTTCTTCCACTGTAACAGATNTGTTATTTTCAAGAA
JMFS067F09+ GTTATTTTCAAGAA
____________________________________________________________
consensus TCATCTCAGCCAGTTCTTCCACTGTAACAGATNTGTTATTTTCAAGAA
. : . : . : . : . : . :
JMFS112H07+ GCTCATTCCAAGCGAATTCAAGAAGTGCTGGATCCAAGTTATTATGAGCTTTCTGGACAA
JMFS067F09+ GCTCATTCCAAGCGAATTCAAGAAGTGCTGGATCCAAGTTATTATGAGCTTTCTGGACAA
JMSF037C08+ GAATTCAAGAAGTGCTGGATCCAAGTTATTATGAGCTTTCTGGACAA
____________________________________________________________
consensus GCTCATTCCAAGCGAATTCAAGAAGTGCTGGATCCAAGTTATTATGAGCTTTCTGGACAA
. : . : . : . : . : . :
JMFS112H07+ AGTTTGATATCTCGATGGGGTCAAAGTTCTCAATTCCAGGAACAATAAAAGTAACTTGCT
JMFS067F09+ AGTTTGATATCTCGATGGGGTCAAAGTTCTCAATTCCAGGAACAATAAAAGTAACTTGCT
JMSF037C08+ AGTTTGATATCTCGATGGGGTCAAAGTTCTCAATTCCAGGAACAATAAAAGTAACTTGCT
____________________________________________________________
consensus AGTTTGATATCTCGATGGGGTCAAAGTTCTCAATTCCAGGAACAATAAAAGTAACTTGCT
. : . : . : . : . : . :
JMFS112H07+ GTGGTTTTATTGAGGTTGTTACACCATTCTGATCTGAGACGGTCCAATTCTTTTTCCCAT
JMFS067F09+ GTGGTTTTATTGAGGTTGTTACACCATTCTGATCTGAGACGGTCCAATTCTTTTTCCCAT
JMSF037C08+ GTGGTTTTATTGAGGTTGTTACACCATTCTGATCTGAGACGGTCCAATTCTTTTTCCCAT
____________________________________________________________
consensus GTGGTTTTATTGAGGTTGTTACACCATTCTGATCTGAGACGGTCCAATTCTTTTTCCCAT
. : . : . : . : . : . :
JMFS112H07+ CAGGTCTAAGAGCAACTGCTAGCAATAGCCTTTCAGAGTCCTTCTTGAACTCTAGCAGCA
JMFS067F09+ CAGGTCTAAGAGCAACTGCTAGCAATAGCCTTTCAGAGTCCTTCTTGAACTCTAGCAGCA
JMSF037C08+ CAGGTCTAAGAGCAACTGCTAGCAATAGCCTTTCAGAGTCCTTCTTGAACTCTAGCAGCA
____________________________________________________________
consensus CAGGTCTAAGAGCAACTGCTAGCAATAGCCTTTCAGAGTCCTTCTTGAACTCTAGCAGCA
. : . : . : . : . : . :
JMFS112H07+ ACCCCTTTCGCATTGCTTGTTTTCCTACTTTATCCTCAAGAAGCTCACTAGTGCTGGTTA
JMFS067F09+ ACCCCTTTCGCATTGCTTGTTTTCCTACTTTATCCTCAAGAAGCTCACTAGTGCTGGTTA
JMSF037C08+ ACCCCTTTCGCATTGCTTGTTTTCCTACTTTATCCTCAAGAAGCTCACTAGTGCTGGTTA
JMSF001L06+ ATCCTCAAGAAGCTCACTAGTGCTGGTTA
____________________________________________________________
consensus ACCCCTTTCGCATTGCTTGTTTTCCTACTTTATCCTCAAGAAGCTCACTAGTGCTGGTTA
. : . : . : . : . : . :
JMFS112H07+ ATCCCAATTCGGTAGAAGCACGAATTCTCCCTCGTTTGCGCAAGGAATAGAGCTCTTCTA
JMFS067F09+ ATCCCAATTCGGTAGAAGCACGAATTCTCCCTCGTTTGCGCAAGGAATAGAGCTCTTCTA
JMSF037C08+ ATCCCAATTCGGTAGAAGCACGAATTCCCCCTCGTTTGCGCAAGGAATAGAGCTCTTCTA
JMSF001L06+ ATCCCAATTCGGTAGAAGCACGAATTCTCCCTCGTTTGCGCAAGGAATAGAGCTCTTCTA
____________________________________________________________
consensus ATCCCAATTCGGTAGAAGCACGAATTCTCCCTCGTTTGCGCAAGGAATAGAGCTCTTCTA
. : . : . : . : . : . :
JMFS112H07+ TGACGGTCTCAACCAGGCTTTGCACAGAGTAGCTCCGAGCACCGTCATGGCTGAGAGGAT
JMFS067F09+ TGACGGTCTCAACCAGGCTTTGCACAGAGTAGCTCCGAGCACCGTCATGGCTGAGAGGAT
JMSF037C08+ TGACGGTCTCAACCAGGCTTTGCACAGAGTAGCTCCGAGCACCGTCATGGCTGAGAGGAT
JMSF001L06+ TGACGGTCTCAACCAGGCTTTGCACAGAGTAGCTCCGAGCACCGTCATGGCTGAGAGGAT
____________________________________________________________
consensus TGACGGTCTCAACCAGGCTTTGCACAGAGTAGCTCCGAGCACCGTCATGGCTGAGAGGAT
. : . : . : . : . : . :
JMFS112H07+ AAGGCGTGCAACGGGGAAGCGAGAACCGAGAATGCAATCTTAAGTATCTGTGAAACCGCC
JMFS067F09+ AAGGCGTGCAACGGGGAAGCGAGAACCGAGAATGCAATCTTAAGTATCTGTGAAACCGCC
JMSF037C08+ AAGGCGTGCAACGGGGAAGCGAGAACCGAGAATGCAATCTTAAGTATCTGTGAAACCGCC
JMSF001L06+ AAGGCGTGCAACGGGGAAGCGAGAACCGAGAATGCAATCTTAAGTATCTGTGAAACCGCC
____________________________________________________________
consensus AAGGCGTGCAACGGGGAAGCGAGAACCGAGAATGCAATCTTAAGTATCTGTGAAACCGCC
. : . : . : . : . : . :
JMFS112H07+ GCGTTCTGAGTTGGCGCTGGGGACAACAGCTCCAGAACGTCGGCGCCAGCGGCGGAGGCG
JMFS067F09+ GCGTTCTGAGTTGGCGCTGGGGACAACAGCTCCAGAACGTCGGCGCCAGCGGCGGAGGCG
JMSF037C08+ GCGTTCTGAGTTGGCGCTGGGGACAACAGCTCCAGAACGTCGGCGCCAGCGGCGGAGGCG
JMSF001L06+ GCGTTCTGAGTTGGCGCTGGGGACAACAGCTCCAGAACGTCGGCGCCAGCGGCGGAGGCG
____________________________________________________________
consensus GCGTTCTGAGTTGGCGCTGGGGACAACAGCTCCAGAACGTCGGCGCCAGCGGCGGAGGCG
. : . : . : . : . : . :
JMFS112H07+ ACGCTGCGGAGCGGATAAATATGCAGCTATTCATGGCGC
JMFS067F09+ ACGCTGCGGAGCGGATAAATATGCAGCTATTCATGGCGCGGGCTGCCATGTTCGGCGGTT
JMSF037C08+ ACGCTGCGGAGCGGATAAATATGCAGCTATTCATGGCGCGGGCTGCCATGTTCGGCGGTT
JMSF001L06+ ACGCTGCGGAGCGGATAAATATGCAGCTATTCATGGCGCGGGCTGCCATGTTCGGCGGTT
____________________________________________________________
consensus ACGCTGCGGAGCGGATAAATATGCAGCTATTCATGGCGCGGGCTGCCATGTTCGGCGGTT
. : . : . : . : . : . :
JMFS067F09+ ACAACCTA
JMSF037C08+ ACAACCTATAACTACCTGGTTCAAGAAATTGTTTGGGGTTTGGATTGAGAGAGCC
JMSF001L06+ ACAACCTATAACTACCTGGTTCAAGAAATTGTTTGGGGTTTGGATTGAGAGAGCCAGTCC
____________________________________________________________
consensus ACAACCTATAACTACCTGGTTCAAGAAATTGTTTGGGGTTTGGATTGAGAGAGCCAGTCC