| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001E13 | Sequence | 447 | 012829 (27) | emb|CDP11417.1| | 1e-60 | unnamed protein product [Coffea canephora] | 242 | 003474 (8) | |||
| JMFF004E07 | Sequence | 162 | 012829 (27) | 704 | 003474 (8) | ref|XP_011101270.1| | 8e-44 | PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Sesamum | |||
| JMFF012B07 | Sequence | 521 | 005274 (39) | gb|AAK49454.1|AF304374_1 | 2e-92 | cellulose synthase catalytic subunit [Nicotiana alata] | 723 | 003474 (8) | ref|XP_011101270.1| | 3e-41 | PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Sesamum |
| JMFF041P23 | Sequence | 643 | 012829 (27) | emb|CDP11417.1| | 1e-76 | unnamed protein product [Coffea canephora] | 644 | 003474 (8) | ref|XP_011101270.1| | 2e-36 | PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Sesamum |
| JMFS124B07 | Sequence | 562 | 003474 (8) | ref|XP_011101270.1| | 1e-40 | PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Sesamum | |||||
| JMFS136H09 | Sequence | 622 | 003474 (8) | ref|XP_011074751.1| | 6e-17 | PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Sesamum | |||||
| JMSF022G13 | Sequence | 631 | 012829 (27) | gb|KCW57897.1| | 3e-140 | hypothetical protein EUGRSUZ_H006462, partial [Eucalyptus grandis] | 798 | 003474 (8) | ref|XP_011074751.1| | 3e-44 | PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Sesamum |
| JMSF046D10 | Sequence | 744 | 012829 (27) | ref|XP_002265955.1| | 4e-60 | PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming] [Vitis vinife | 707 | 003474 (8) | ref|XP_011101270.1| | 6e-43 | PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Sesamum |
This contig is upended
. : . : . : . : . : . :
rJMSF022G13+ TCCAAAGCAGCGG
____________________________________________________________
consensus TCCAAAGCAGCGG
. : . : . : . : . : . :
rJMSF046D10+ CTCCCAT
rJMFF004E07+ CTCCCAT
rJMSF022G13+ ATGATGGGAGTTTTCGGAGCTTTACCTCTTCAAGTGGACGTCTCTCTTGATCCCTCCCAT
____________________________________________________________
consensus ATGATGGGAGTTTTCGGAGCTTTACCTCTTCAAGTGGACGTCTCTCTTGATCCCTCCCAT
. : . : . : . : . : . :
JMFS124B07- CGCCATCAACAA
rJMSF046D10+ GACTCTGTTAATCATCAACATCATTGGTGTCATAGTGGGTGTTTCAGACGCCATCAACAA
rJMFF004E07+ GACTCTGTTAATCATCAACATCATTGGTGTCATAGTGGGTGTTTCAGACGCCATCAACAA
rJMSF022G13+ GACTCTGTTAATCATCAACATCATTGGTGTCATAGTGGGTGTTTCAGACGCCATCAACAA
rJMFF012B07+ TCTGTTAATCATCAACATCATTGGTGTCATAGTGGGTGTTTCAGACGCCATCAACAA
____________________________________________________________
consensus GACTCTGTTAATCATCAACATCATTGGTGTCATAGTGGGTGTTTCAGACGCCATCAACAA
. : . : . : . : . : . :
JMFS124B07- TGGGTATGATTCATGGGGACCGCTATTTGGCAAGCTCTTCTTTGCAATCTGGGTTATTGT
rJMSF046D10+ TGGGTATGATTCATGGGGACCGCTATTTGGCAAGCTCTTCTTTGCAATCTGGGTTATTGT
rJMFF004E07+ TGGGTATGATTCATGGGGACCGCTATTTGGCAAGCTCTTCTTTGCAATCTGGGTTATTGT
rJMSF022G13+ TGGGTATGATTCATGGGGACCGCTATTTGGC-ATCTCTTCTTTGCAATCTGGGTTATTGT
rJMFF041P23+ TATGATTCATGGGGACCGCTATTTGGCAAGCTCTTCTTTGCAATCTGGGTTATTGT
rJMFF012B07+ TGGGTATGATTCATGGGGACCGCTATTTGGCAAGCTCTTCTTTGCAATCTGGGTTATTGT
____________________________________________________________
consensus TGGGTATGATTCATGGGGACCGCTATTTGGCAAGCTCTTCTTTGCAATCTGGGTTATTGT
. : . : . : . : . : . :
JMFS124B07- CCATCTCTATCCTTTCCTCAAAGGTTTGATGGGGAAACAGGATGGGGTTCCTACCATTAT
rJMSF046D10+ CCATCTCTATCCTTTCCTCAAAGGTTTGATGGGGAAACAGGATGGGGTTCCTACCATTAT
rJMFF004E07+ CCATCTCTATCCTTTCCTCAAAGGTTTGATGGGGAAACAGGATGGGGTTCCTACCATTAT
rJMSF022G13+ CCATCTCTATCCTTTCCTCAAAGGTTTGATGGGGAAACAGGATGGGGTTCCTACCATTAT
rJMFF041P23+ CCATCTCTATCCTTTCCTCAAAGGTTTGATGGGGAAACAGGATGGGGTTCCTACCATTAT
rJMFF012B07+ CCATCTCTATCCTTTCCTCAAAGGTTTGATGGGGAAACAGGATGGGGTTCCTACCATTAT
JMFS136H09+ CAGGATGGGGTTCCTACCATAAT
____________________________________________________________
consensus CCATCTCTATCCTTTCCTCAAAGGTTTGATGGGGAAACAGGATGGGGTTCCTACCATTAT
. : . : . : . : . : . :
JMFS124B07- CGTAGTGTGGTCTATTCTTCTCGCTTCTATCTTCTCGCTATTATGGGTCCGAATAAACCC
rJMSF046D10+ CGTAGTGTGGTCTATTCTTCTCGCTTCTATCTTCTCGCTATTATGGGTCCGAATAAACCC
rJMFF004E07+ CGTAGTGTGGTCTATTCTTCTCGCTTCTATCTTCTCGCTATTATGGGTCCGAATAAACCC
rJMSF022G13+ CGTAGTGTGGTCTATTCTTCTCGCTTCTATCTTCTCGCTATTATGGGTCCGAATAAACCC
rJMFF041P23+ CGTAGTGTGGTCTATTCTTCTCGCTTCTATCTTCTCGCTATTATGGGTCCGAATAAACCC
rJMFF012B07+ CGTAGTGTGGTCTATTCTTCTCGCTTCTATCTTCTCGCTATTATGGGTCCGAATAAACCC
JMFS136H09+ CGTAGTGTGGTCTATTCTTCTCGCTTCTATCTTCTCGCTATTATGGGTCCGAATAAACCC
____________________________________________________________
consensus CGTAGTGTGGTCTATTCTTCTCGCTTCTATCTTCTCGCTATTATGGGTCCGAATAAACCC
. : . : . : . : . : . :
JMFS124B07- GTTCGTGTCAAGAGATGGACTTGTGTTAGAAGTATGCGGGTTGGACTGTGAGTGACAAGG
rJMSF046D10+ GTTCGTGTCAAGAGATGGACTTGTGTTAGAAGTATGCGGGTTGGACTGTGAGTGACAAGG
rJMFF004E07+ GTTCGTGTCAAGAGATGGACTTGTGTTAGAAGTATGCGGGTTGGACTGTGAGTGACAAGG
rJMSF022G13+ GTTCGTGTCAAGAGATGGACTTGTGTTAGAAGTATGCGGGTTGGACTGTGAGTGACAAGG
rJMFF041P23+ GTTCGTGTCAAGAGATGGACTTGTGTTAGAAGTATGCGGGTTGGACTGTGAGTGACAAGG
rJMFF012B07+ GTTCGTGTCAAGAGATGGACTTGTGTTAGAAGTATGCGGGTTGGACTGTGAGTGACAAGG
JMFS136H09+ GTTCGTGTCAAGAGATGGACTTGTGTTAGAAGTATGCGGGTTGGACTGTGAGTGACAAGG
____________________________________________________________
consensus GTTCGTGTCAAGAGATGGACTTGTGTTAGAAGTATGCGGGTTGGACTGTGAGTGACAAGG
. : . : . : . : . : . :
JMFS124B07- AAAATAGAAAGATTAGATGATCTGAATGTAGAAATGTTATGGCTGGGATCGGGTGTGTTT
rJMSF046D10+ AAAATAGAAAGATTAGATGATCTGAATGTAGAAATGTTATGGCTGGGATCGGGTGTGTTT
rJMFF004E07+ AAAATAGAAAGATTAGATGATCTGAATGTAGAAATGTTATGGCTGGGATCGGGTGTGTTT
rJMSF022G13+ AAAATAGAAAGATTAGATGATCTGAATGTAGAAATGTTATGGCTGGGATCGGGTGTGTTT
rJMFF041P23+ AAAATAGAAAGATTAGATGATCTGAATGTAGAAATGTTATGGCTGGGATCGGGTGTGTTT
rJMFF012B07+ AAAATAGAAAGATTAGATGATCTGAATGTAGAAATGTTATGGCTGGGATCGGGTGTGTTT
JMFS136H09+ AAAATAGAAAGATTAGATGATCTGAATGTAGAAATGTTATGGCTGGGATCGGGTGTGTTT
____________________________________________________________
consensus AAAATAGAAAGATTAGATGATCTGAATGTAGAAATGTTATGGCTGGGATCGGGTGTGTTT
. : . : . : . : . : . :
JMFS124B07- TGAGAGCAGAGCAGAGGCGCCTCCCGGGGAGAGACAAAAGAGCATCCTGACATGGTTTGA
rJMSF046D10+ TGAGAGCAGAGCAGAGGCGCCTCCCGGGGAGAGACAAAAGAGCATCCTGACATGGTTTGA
rJMFF001E13+ CATGGTTTGA
rJMFF004E07+ TGAGAGCAGAGCAGAGGCGCCTCCCGGGGAGAGACAAAAGAGCATCCTGACATGGTTTGA
rJMSF022G13+ TGAGAGCAGAGCAGAGGCGCCTCCCGGGGAGAGACAAAAGAGCATCCTGACATGGTTTGA
rJMFF041P23+ TGAGAGCAGAGCAGAGGCGCCTCCCGGGGAGAGACAAAAGAGCATCCTGACATGGTTTGA
rJMFF012B07+ TGAGAGCAGAGCAGAGGCGCCTCCCGGGGAGAGACAAAAGAGCATCCTGACATGGTTTGA
JMFS136H09+ TGAGAGCAGAGCAGAGGCGCCTCCCGGGGAGAGACAAAAGAGCATCCTGACATGGTTTGA
____________________________________________________________
consensus TGAGAGCAGAGCAGAGGCGCCTCCCGGGGAGAGACAAAAGAGCATCCTGACATGGTTTGA
. : . : . : . : . : . :
JMFS124B07- TTGCCCAGGATTCATATGATCGATCGAGTTGGATAAATGGAAGGAAGGGGCTGTAGTTGC
rJMSF046D10+ TTGCCCAGGATTCATATGATCGATCGAGTTGGATAAATGGAAGGAAGGGGCTGTAGTTGT
rJMFF001E13+ TTGCCCAGGATTCATATGATCGATCGAGTTGGATAAATGGAAGGAAGGGGCTGTAGTTGT
rJMFF004E07+ TTGCCCAGGATTCATATGATCGATCGAGTTGGATAAATGGAAGGAAGGGGCTGTAGTTGT
rJMSF022G13+ TTGCCCAGGATTCATATGATCGATCGAGTTGGATAAATGGAAGGAAGGGGCTGTAGTTGT
rJMFF041P23+ TTGCCCAGGATTCATATGATCGATCGAGTTGGATAAATGGAAGGAAGGGGCTGTAGTTGT
rJMFF012B07+ TTGCCCAGGATTCATATGATCGATCGAGTTGGATAAATGGAAGGAAGGGGCTGTAGTTGT
JMFS136H09+ TTGCCCAGGATTCATATGATCGATCGAGTTGGATAAATGGAAGGAAGGGGCTGTAGTTGT
____________________________________________________________
consensus TTGCCCAGGATTCATATGATCGATCGAGTTGGATAAATGGAAGGAAGGGGCTGTAGTTGT
. : . : . : . : . : . :
JMFS124B07- GTATAGATCGATTTATGGTAGTTTATGATATTCATTCTTTTGGTAGTGTGGGATTTGTGG
rJMSF046D10+ GTATAGATCGATTTATGGTAGTTTATGATATTCATTCTTTTGGTAGTGTGGGATTTGTGG
rJMFF001E13+ GTATAGATCGATTTATGGTAGTTTATGATATTCATTNTNTTNGTAGTTTGGGATTTGTGG
rJMFF004E07+ GTATAGATCGATTTATGGTAGTTTATGATATTCATTCTTTTGGTAGTTTGGGATTTGTGG
rJMSF022G13+ GTATAGATCGATTTATGGTAGTTTATGATATTCATTCTTTTGGTAGTGTGGGATTTGTGG
rJMFF041P23+ GTATAGATCGATTTATGGTAGTTTATGATATTCATTCTTTTGGTAGTTTGGGATTTGTGG
rJMFF012B07+ GTATAGATCGATTTATGGTAGTTTATGATATTCATTCTTTTGGTAGTGTGGGATTTGTGG
JMFS136H09+ GTATAGATCGATTTATGGTAGTTTATGATATTCATTCTTTTGGTAGTGTGGGATTTGTGG
____________________________________________________________
consensus GTATAGATCGATTTATGGTAGTTTATGATATTCATTCTTTTGGTAGTGTGGGATTTGTGG
. : . : . : . : . : . :
JMFS124B07- ATTTGCAATCAATGTCTGTGAAATCCCAAAAGGAATATAAGATTATTATTACCACATAAC
rJMSF046D10+ ATTTGCAATCAATGTCTGTGAAATCCCAAAAGGAATATAAGATTATTATTACCACATAAC
rJMFF001E13+ ANTAGCAATCAATGTNTGTGAAATCCCAAAAGGAATATAAGATTATTATTACCACATAAC
rJMFF004E07+ ATTTGCAATCAATGTCTGTGAAATCCCAAAAGGAATATAAGATTATTATTACCACATAAC
rJMSF022G13+ ATTTGCAATCAATGTCTGTGAAATCCCAAAAGGAATATAAGATTATTATTACCACATAAC
rJMFF041P23+ ATTTGCAATCAATGTCTGTGAAATCCCAAAAGGAATATAAGATTATTATTACCACATAAC
rJMFF012B07+ ATTTGCAATCAATGTCTGTGAAATCCCAAAAGGAATATAAGATTATTATTACCACATAAC
JMFS136H09+ ATTTGCAATCAATGTCTGTGAAATCCCAAAAGGAATATAAGATTATTATTACCACATAAC
____________________________________________________________
consensus ATTTGCAATCAATGTCTGTGAAATCCCAAAAGGAATATAAGATTATTATTACCACATAAC
. : . : . : . : . : . :
JMFS124B07- ATGAGAAACT
rJMSF046D10+ ATGAGAAACTATATATATCCATCCCCTTCTTATTAAGGGAGGACTTGCACACACAAATAT
rJMFF001E13+ ATGAGAAACTATATATATCCATCCCCTTNTTATTAAGGGAGGACTTGC
rJMFF004E07+ ATGAGAAACTATATATATCCATCCCCTTCTTATTAAGGGAGGACTTGCACACACAAATAT
rJMSF022G13+ ATGAGAAACTATATATATCCATCCCCTTCTTATTAAGGGAGGACTTGCACACACAAATAT
rJMFF041P23+ ATGAGAAACTATATATATCCATCCCCTTCTTATTAAGGGAGGACTTGCACACACAAATAT
rJMFF012B07+ ATGAGAAACTATATATATCCATCCCCTTCTTATTAAGGGAGGACTTGCACACACAAATAT
JMFS136H09+ ATGAGAAACTATATATATCCATCCCCTTCTTATTAAGGGAGGACTTGCACACACAAATAT
____________________________________________________________
consensus ATGAGAAACTATATATATCCATCCCCTTCTTATTAAGGGAGGACTTGCACACACAAATAT
. : . : . : . : . : . :
rJMSF046D10+ AATGTTGTGTACTTTTCATCGTAATTTGCAGAAA
rJMFF004E07+ AATGTTGTGTACTTTTCGTCGTAATT
rJMSF022G13+ AATGTTGTGTACTTTTCATCGTAATTTGCAGAAACCAGTACGTGTGTAGAAACTCAAGAA
rJMFF041P23+ AATGTTGTGTACTTTTCGTCGTAATTTGCAGAAA-C
rJMFF012B07+ AATGTTGTGTACTTTTCATCGTAATTTGCAGAAA-CAGTACGTGTGTAGAAACTCAAGAA
JMFS136H09+ AATGTTGTGTACTTTTCATCGTAATTTGCAGAAA-CAGTACGTGTGTAGAAACTCAAGAA
____________________________________________________________
consensus AATGTTGTGTACTTTTCATCGTAATTTGCAGAAA-CAGTACGTGTGTAGAAACTCAAGAA
. : . : . : . : . : . :
rJMSF022G13+ TCAT
rJMFF012B07+ TCAT
JMFS136H09+ TCATTATTATTGTTTGTTCTCAAATTAAAAAAAAAAAAAAAAAAACTCGGACTAGTTCTC
____________________________________________________________
consensus TCATTATTATTGTTTGTTCTCAAATTAAAAAAAAAAAAAAAAAAACTCGGACTAGTTCTC