Contig 003473:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS032F11Sequence564003473 (7)emb|CBI40337.3|2e-62unnamed protein product [Vitis vinifera]
JMFS062B07Sequence473003473 (7)ref|XP_010105960.1|3e-47Multiple C2 and transmembrane domain-containing protein 1 [Morus notabilis] gb|
JMFS136G08Sequence596003473 (7)emb|CBI40337.3|3e-60unnamed protein product [Vitis vinifera]
JMFS137G09Sequence611003473 (7)ref|XP_004229889.1|7e-72PREDICTED: multiple C2 and transmembrane domain-containing protein 2-like [Sola
JMFS162D08Sequence524003473 (7)emb|CBI40337.3|1e-61unnamed protein product [Vitis vinifera]
JMSF003C19Sequence367003473 (7)emb|CBI40337.3|5e-31unnamed protein product [Vitis vinifera]780005751 (3)emb|CDP08834.1|5e-123unnamed protein product [Coffea canephora]
JMSF036A22Sequence670003473 (7)ref|XP_004229889.1|9e-73PREDICTED: multiple C2 and transmembrane domain-containing protein 2-like [Sola639005751 (3)emb|CDP08834.1|7e-75unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS137G09+ A
JMSF036A22+ GTCTACAAATGGAGAA
                      ____________________________________________________________
consensus GTCTACAAATGGAGAA
 
. : . : . : . : . : . :
JMFS137G09+ TGAGCCTGTTGTTGTTCGTGCTTTCTGTTCGGGAGGTGATGGAAAGTATGTCTCGACCCT
JMSF036A22+ TGAGCCTGTTGTTGTTCGTGCTTTCTGTTCGGGAGGTGATGGAAAGTATGTCTCGACCCT
                      ____________________________________________________________
consensus TGAGCCTGTTGTTGTTCGTGCTTTCTGTTCGGGAGGTGATGGAAAGTATGTCTCGACCCT
 
. : . : . : . : . : . :
JMFS137G09+ TTTTTCCCATTAGAGAATGGCTCTGTATTATTGGAATGTGAAGGAAAATCCATTGAAAAA
JMSF036A22+ TTTTTCCCATTAGAGAATGGCTCTGTATTATTGGAATGTGAAGGAAAATCCATTGAAAAA
                      ____________________________________________________________
consensus TTTTTCCCATTAGAGAATGGCTCTGTATTATTGGAATGTGAAGGAAAATCCATTGAAAAA
 
. : . : . : . : . : . :
JMFS137G09+ GGGTTCGAGGTGCTAAGAGAGGGGTCATCTGTGATAAAGACTTTCAAGCCAAGCTCTCCT
JMFS162D08+ GGTTCGAGGTGCTAAGAGAGGGGTCATCTGTGATAAAGACTTTCAAGCCAAGCTCTCCT
JMSF036A22+ GGGTTCGAGGTGCTAAGAGAGGGGTCATCTGTGATAAAGACTTTCAAGCCAAGCTCTCCT
JMFS032F11+ GGTTCGAGGTGCTAAGAGAGGGGTCATCTGTGATAAAGACTTTCAAGCCAAGCTCTCCT
JMFS136G08+ TAAGAGAGGGGTCATCTGTGATAAAGACTTTCAAGCCAAGCTCTCCT
                      ____________________________________________________________
consensus GGGTTCGAGGTGCTAAGAGAGGGGTCATCTGTGATAAAGACTTTCAAGCCAAGCTCTCCT
 
. : . : . : . : . : . :
JMFS137G09+ CTAGCACGGGAGAAAACGCCCACCTTCTCGAGAGGGTAATGCAAGACAACAGCATCAGAA
JMFS162D08+ CTAGCACGGGAGAAAACGCCCACCTTCTCGAGAGGGTAATGCAAGACAACAGCATCAGAA
JMSF036A22+ CTAGCACGGGAGAAAACGCCCACCTTCTCGAGAGGGTAATGCAAGACAACAGCATCAGAA
JMFS032F11+ CTAGCACGGGAGAAAACGCCCACCTTCTCGAGAGGGTAATGCAAGACAACAGCATCAGAA
JMFS062B07+ CGAGAGGGTAATGCAAGACAACAGCATCAGAA
JMFS136G08+ CTAGCACGGGAGAAAACGCCCACCTTCTCGAGAGGGTAATGCAAGACAACAGCATCAGAA
                      ____________________________________________________________
consensus CTAGCACGGGAGAAAACGCCCACCTTCTCGAGAGGGTAATGCAAGACAACAGCATCAGAA
 
. : . : . : . : . : . :
JMFS137G09+ TAGGGAACAAAAGATGATCCAGCTATACAAACTTTCCCAAGAGAGGATTTCGACCGGCCA
JMFS162D08+ TAGGGAACAAAAGATGATCCAGCTATACAAACTTTCCCAAGAGAGGATTTCGACCGGCCA
JMSF036A22+ TAGGGAACAAAAGATGATCCAGCTATACAAACTTTCCCAAGAGAGGATTTCGACCGGCCA
JMFS032F11+ TAGGGAACAAAAGATGATCCAGCTATACAAACTTTCCCAAGAGAGGATTTCGACCGGCCA
JMFS062B07+ TAGGGAACAAAAGATGATCCAGCTATACAAACTTTCCCAAGAGAGGATTTCGACCGGCCA
JMFS136G08+ TAGGGAACAAAAGATGATCCAGCTATACAAACTTTCCCAAGAGAGGATTTCGACCGGCCA
                      ____________________________________________________________
consensus TAGGGAACAAAAGATGATCCAGCTATACAAACTTTCCCAAGAGAGGATTTCGACCGGCCA
 
. : . : . : . : . : . :
JMFS137G09+ GTCTTATTATTGTTGAAAACAAGAGCCTCGAGTGTGAGTTTAGGCAAGCGATTAGGATCG
JMFS162D08+ GTCTTATTATTGTTGAAAACAAGAGCCTCGAGTGTGAGTTTAGGCAAGCGATTAGGATCG
JMSF003C19+ TCTTATTATTGTTGAAAACAAGAGCCTCGAGTGTGAGTTTAGGCAAGCGATTAGGATCG
JMSF036A22+ GTCTTATTATTGTTGAAAACAAGAGCCTCGAGTGTGAGTTTAGGCAAGCGATTAGGATCG
JMFS032F11+ GTCTTATTATTGTTGAAAACAAGAGCCTCGAGTGTGAGTTTAGGCAAGCGATTAGGATCG
JMFS062B07+ GTCTTATTATTGTTGAAAACAAGAGCCTCGAGTGTGAGTTTAGGCAAGCGATTAGGATCG
JMFS136G08+ GTCTTATTATTGTTGAAAACAAGAGCCTCGAGTGTGAGTTTAGGCAAGCGATTAGGATCG
                      ____________________________________________________________
consensus GTCTTATTATTGTTGAAAACAAGAGCCTCGAGTGTGAGTTTAGGCAAGCGATTAGGATCG
 
. : . : . : . : . : . :
JMFS137G09+ GGTATATTAATGTAGAACGTCTCATTCCAAACAGGGTCAAGATCCTTTTCTTTGACAGTC
JMFS162D08+ GGTATATTAATGTAGAACGTCTCATTCCAAACAGGGTCAAGATCCTTTTCTTTGACAGTC
JMSF003C19+ GGTATATTAATGTAGAACGTCTCATTCCAAACAGGGTCAAGATCCTTTTCTTTGACAGTC
JMSF036A22+ GGTATATTAATGTAGAACGTCTCATTCCAAACAGGGTCAAGATCCTTTTCTTTGACAGTC
JMFS032F11+ GGTATATTAATGTAGAACGTCTCATTCCAAACAGGGTCAAGATCCTTTTCTTTGACAGTC
JMFS062B07+ GGTATATTAATGTAGAACGTCTCATTCCAAACAGGGTCAAGATCCTTTTCTTTGACAGTC
JMFS136G08+ GGTATATTAATGTAGAACGTCTCATTCCAAACAGGGTCAAGATCCTTTTCTTTGACAGTC
                      ____________________________________________________________
consensus GGTATATTAATGTAGAACGTCTCATTCCAAACAGGGTCAAGATCCTTTTCTTTGACAGTC
 
. : . : . : . : . : . :
JMFS137G09+ GTGCGAAACTTCTGGTTATCAAAGTGAATCTCCACAAAGGCACTGGATAAGTCTTTCCCA
JMFS162D08+ GTGCGAAACTTCTGGTTATCAAAGTGAATCTCCACAAAGGCACTGGATAAGTCTTTCCCA
JMSF003C19+ GTGCGAAACTTCTGGTTATCAAAGTGAATCTCCACAAAGGCACTGGATAAGTCTTTCCCA
JMSF036A22+ GTGCGAAACTTCTGGTTATCAAAGTGAATCTCCACAAAGGCACTGGATAAGTCTTTCCCA
JMFS032F11+ GTGCGAAACTTCTGGTTATCAAAGTGAATCTCCACAAAGGCACTGGATAAGTCTTTCCCA
JMFS062B07+ GTGCGAAACTTCTGGTTATCAAAGTGAATCTCCACAAAGGCACTGGATAAGTCTTTCCCA
JMFS136G08+ GTGCGAAACTTCTGGTTATCAAAGTGAATCTCCACAAAGGCACTGGATAAGTCTTTCCCA
                      ____________________________________________________________
consensus GTGCGAAACTTCTGGTTATCAAAGTGAATCTCCACAAAGGCACTGGATAAGTCTTTCCCA
 
. : . : . : . : . : . :
JMFS137G09+ TCTTTAGGAATTAGATTATGGGCACTCACCACTTCTACCCCTAGCTTGAGGTTGCTCATG
JMFS162D08+ TCTTTAGGAATTAGATTATGGGCACTCACCACTTCTACCCCTAGCTTGAGGTTGCTCATG
JMSF003C19+ TCTTTAGGAATTAGATTATGGGCACTCACCACTTCTACCCCTAGCTTGAGGTTGCTCATG
JMSF036A22+ TCTTTAGGAATTAGATTATGGGCACTCACCACTTCTACCCCTAGCTTGAGGTTGCTCATG
JMFS032F11+ TCTTTAGGAATTAGATTATGGGCACTCACCACTTCTACCCCTAGCTTGAGGTTGCTCATG
JMFS062B07+ TCTTTAGGAATTAGATTATGGGCACTCACCACTTCTACCCCTAGCTTGAGGTTGCTCATG
JMFS136G08+ TCTTTAGGAATTAGATTATGGGCACTCACCACTTCTACCCCTAGCTTGAGGTTGCTCATG
                      ____________________________________________________________
consensus TCTTTAGGAATTAGATTATGGGCACTCACCACTTCTACCCCTAGCTTGAGGTTGCTCATG
 
. : . : . : . : . : . :
JMFS137G09+ GAGTAACTTTGATCCCTTGACGAAGCAAATATGGAGATAAAGTGGATGACAAGCTGCTTT
JMFS162D08+ GAGTAACTTTGATCCCTTGACGAAGCAAATATGGAGATAAAGTGGATGACAAGCTGCTTT
JMSF003C19+ GAGTAACTTTGATCCCTTGACGAAGCAAATATGGAGATAAAGTGGATGACAAGCT
JMSF036A22+ GAGTAACTTTGATCCCTTGACGAAGCAAATATGGAGATAAAGTGGATGACAAGCTGCTTT
JMFS032F11+ GAGTAACTTTGATCCCTTGACGAAGCAAATATGGAGATAAAGTGGATGACAAGCTGCTTT
JMFS062B07+ GAGTAACTTTGATCCCTTGACGAAGCAAATATGGAGATAAAGTGGATGACAAGCTGCTTT
JMFS136G08+ GAGTAACTTTGATCCCTTGACGAAGCAAATATGGAGATAAAGTGGATGACAAGCTGCTTT
                      ____________________________________________________________
consensus GAGTAACTTTGATCCCTTGACGAAGCAAATATGGAGATAAAGTGGATGACAAGCTGCTTT
 
. : . : . : . : . : . :
JMFS137G09+ GAGCTTTATC
JMFS162D08+ GAGCTTTATCTGGGTATCAGAGCCTGAAGAAAAAAGTAAGTCCTT
JMSF036A22+ GAGCTTTATCTGGGTATCAGAGCCTGAAGAAAAAAGTAAGTCCTTTTTCC
JMFS032F11+ GAGCTTTATCTGGGTATCAGAGCCTGAAGAAAAAAGTAAGTCCTTTTTCCCCTTCCTTTT
JMFS062B07+ GAGCTTTATCTGGGTATCAGAGCCTGAAGAAAAAAGTAAGTCCTTTTTCCCCTTCCTTTT
JMFS136G08+ GAGCTTTATCTGGGTATCAGAGCCTGAAGAAAAAAGTAAGTCCTTTTTCCCCTTCCTTTT
                      ____________________________________________________________
consensus GAGCTTTATCTGGGTATCAGAGCCTGAAGAAAAAAGTAAGTCCTTTTTCCCCTTCCTTTT
 
. : . : . : . : . : . :
JMFS032F11+ TGTTGAGCTTCAGAAAGTTGT
JMFS062B07+ TGTTGAGCTTCAGAAAGTTGT
JMFS136G08+ TGTTGAGCTTCAGAAAGTTGTGGCTATGAAGAAGAAGAAGAAGAGGAAGAGTAGTTAGAA
                      ____________________________________________________________
consensus TGTTGAGCTTCAGAAAGTTGTGGCTATGAAGAAGAAGAAGAAGAGGAAGAGTAGTTAGAA