Contig 003468:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004G02Sequence575003468 (3)ref|XP_004253096.1|4e-46PREDICTED: far upstream element-binding protein 2 [Solanum lycopersicum]693013606 (3)ref|XP_010097084.1|7e-08Far upstream element-binding protein 2 [Morus notabilis] gb|EXB66885.1| Far upst
JMFS096B02Sequence621003468 (3)ref|XP_004253096.1|1e-71PREDICTED: far upstream element-binding protein 2 [Solanum lycopersicum]
JMFS132D11Sequence588003468 (3)ref|XP_004253096.1|2e-64PREDICTED: far upstream element-binding protein 2 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS096B02+ AAAGAACATCTTGAATCAACTGC
                      ____________________________________________________________
consensus AAAGAACATCTTGAATCAACTGC
 
. : . : . : . : . : . :
JMFS096B02+ TCAGCCTTGGCTATCTGCTCTGGAGTGCCCATTAGTTCAACCCCTCTAGTCTGAGAACTA
JMFS132D11+ ATCTGCTCTGGAGTGCCCATTAGTTCAACCCCTCTAGTCTGAGAACTA
                      ____________________________________________________________
consensus TCAGCCTTGGCTATCTGCTCTGGAGTGCCCATTAGTTCAACCCCTCTAGTCTGAGAACTA
 
. : . : . : . : . : . :
JMFS096B02+ AGGTCAGCATCCATGTCTCTGGTAACTTGTATCTTTGCTCCAGATTGGAGTTGAAGATAC
JMFF004G02+ TCCAGATTGGAGTTGAAGATAC
JMFS132D11+ AGGTCAGCATCCATGTCTCTGGTAACTTGTATCTTTGCTCCAGATTGGAGTTGAAGATAC
                      ____________________________________________________________
consensus AGGTCAGCATCCATGTCTCTGGTAACTTGTATCTTTGCTCCAGATTGGAGTTGAAGATAC
 
. : . : . : . : . : . :
JMFS096B02+ CTAATGGTTTCCCCACCCTTCCCTATGATTACACCAACCCTGGAATTTGGAACCTCTATC
JMFF004G02+ NTAATGGTTTCCCCACCCTTCCCTATGATTACACCAACCCTGGAATTTGGAACCTCTATC
JMFS132D11+ CTAATGGTTTCCCCACCCTTCCCTATGATTACACCAACCCTGGAATTTGGAACCTCTATC
                      ____________________________________________________________
consensus CTAATGGTTTCCCCACCCTTCCCTATGATTACACCAACCCTGGAATTTGGAACCTCTATC
 
. : . : . : . : . : . :
JMFS096B02+ TTCTTGCTTGGACCAGGATAACCGAATGATCCAGTTACTGAAGGAAGTAAAGTAGACCCA
JMFF004G02+ TTCTTGCTTGGACCAGGATAACCGAATGATCCAGTTACTGAAGGAAGTAAAGTAGACCCA
JMFS132D11+ TTCTTGCTTGGACCAGGATAACCGAATGATCCAGTTACTGAAGGAAGTAAAGTAGACCCA
                      ____________________________________________________________
consensus TTCTTGCTTGGACCAGGATAACCGAATGATCCAGTTACTGAAGGAAGTAAAGTAGACCCA
 
. : . : . : . : . : . :
JMFS096B02+ ACTGGCTTCTGAGGTTCTCTAGTTTCAAATGCACCAGCACCAGCACCACCACCGTTGTCA
JMFF004G02+ ACTGGCTTCTGAGGTTCTCTAGTTTCAAATGCACCAGCACCAGCACCACCACCGTTGTCA
JMFS132D11+ ACTGGCTTCTGAGGTTCTCTAGTTTCAAATGCACCAGCACCAGCACCACCACCGTTGTCA
                      ____________________________________________________________
consensus ACTGGCTTCTGAGGTTCTCTAGTTTCAAATGCACCAGCACCAGCACCACCACCGTTGTCA
 
. : . : . : . : . : . :
JMFS096B02+ ACCCTGGGCTTTTTTGGATCCGAGTTGTTGATTAGCCGAGCAGCGATCTCCTGAGCCCTC
JMFF004G02+ ACCCTGGGCTTTTTTGGATCCGAGTTGTTGATTAGCCGAGCAGCGATCTCCTGAGCCCTC
JMFS132D11+ ACCCTGGGCTTTTTTGGATCCGAGTTGTTGATTAGCCGAGCAGCGATCTCCTGAGCCCTC
                      ____________________________________________________________
consensus ACCCTGGGCTTTTTTGGATCCGAGTTGTTGATTAGCCGAGCAGCGATCTCCTGAGCCCTC
 
. : . : . : . : . : . :
JMFS096B02+ TGCTTCGCCAGCTGGAAGTCGTCCATCGGAGGCGCGACATTATTGTACGAAGGAGGAGGA
JMFF004G02+ TGCTTCGCCAGCTGGAAGTCGTCCATCGGAGGCGCGACATTATTGTACGAAGGAGGAGGA
JMFS132D11+ TGCTTCGCCAGCTGGAAGTCGTCCATCGGAGGCGCGACATTATTGTACGAAGGAGGAGGA
                      ____________________________________________________________
consensus TGCTTCGCCAGCTGGAAGTCGTCCATCGGAGGCGCGACATTATTGTACGAAGGAGGAGGA
 
. : . : . : . : . : . :
JMFS096B02+ GCGCCCGCGGCGGCGGAACCGTCGGGTGGAGACAGTGAAGAGATTGGGGCAGAGAATCCG
JMFF004G02+ GCGCCCGCGGCGGCGGAACCGTCGGGTGGAGACAGTGAAGAGATTGGGGCAGAGAATCCG
JMFS132D11+ GCGCCCGCGGCGGCGGAACCGTCGGGTGGAGACAGTGAAGAGATTGGGGCAGAGAATCCG
                      ____________________________________________________________
consensus GCGCCCGCGGCGGCGGAACCGTCGGGTGGAGACAGTGAAGAGATTGGGGCAGAGAATCCG
 
. : . : . : . : . : . :
JMFS096B02+ GTGGGCCTGCGTGACACCGGGGAAGGGGAGGTTGGCTCCTCGTACTTCCTCTTGTTCGAC
JMFF004G02+ GTGGGCCTGCGTGACACCGGGGAAGGGGAGGTTGGCTCCTCGTACTTCCTCTTGTTCGAC
JMFS132D11+ GTGGGCCTGCGTGACACCGGGGAAGGGGAGGTTGGCTCCTCGTACTTCCTCTTGTTCGAC
                      ____________________________________________________________
consensus GTGGGCCTGCGTGACACCGGGGAAGGGGAGGTTGGCTCCTCGTACTTCCTCTTGTTCGAC
 
. : . : . : . : . : . :
JMFS096B02+ CCCGCTTCCGATGCGTACTGTGCCTCTTCAGCCATTTTTG
JMFF004G02+ CCCGCTTCCGATGCGTACTGTGCCTCTTCAGCCAT
JMFS132D11+ CCCGCTTCCGATGCGTACTGTGCCTCTTCAGCCATTTTTGATTGATTTTTGGTGTGAGAA
                      ____________________________________________________________
consensus CCCGCTTCCGATGCGTACTGTGCCTCTTCAGCCATTTTTGATTGATTTTTGGTGTGAGAA