Contig 003462:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS027C01Sequence524003462 (2)ref|XP_011074103.1|5e-07PREDICTED: protein GIGANTEA-like isoform X1 [Sesamum indicum] ref|XP_011074104.1
JMFS123B09Sequence569003462 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS027C01+ TTTGAGCCTTCCGTTGAAGAACATATTGTGGGGGAGGCCAAAATAGCGAGGAGAACTGAA
JMFS123B09+ GGGGGAGGCCAAAATAGCGAGGAGAACTGAA
                      ____________________________________________________________
consensus TTTGAGCCTTCCGTTGAAGAACATATTGTGGGGGAGGCCAAAATAGCGAGGAGAACTGAA
 
. : . : . : . : . : . :
JMFS027C01+ GACGATCTATCCACCTTTCAGACGAGGTAGCCATTTAACTGTTGACCAGCCAACAAATTT
JMFS123B09+ GACGATCTATCCACCTTTCAGACGAGGTAGCCATTTAACTGTTGACCAGCCAACAAATTT
                      ____________________________________________________________
consensus GACGATCTATCCACCTTTCAGACGAGGTAGCCATTTAACTGTTGACCAGCCAACAAATTT
 
. : . : . : . : . : . :
JMFS027C01+ TATCATAAGAAAAGAAGGCTGAAAAGTATATCCACTGAAACTCCAGCTCAGTTTTCTATC
JMFS123B09+ TATCATAAGAAAAGAAGGCTGAAAAGTATATCCACTGAAACTCCAGCTCAGTTTTCTATC
                      ____________________________________________________________
consensus TATCATAAGAAAAGAAGGCTGAAAAGTATATCCACTGAAACTCCAGCTCAGTTTTCTATC
 
. : . : . : . : . : . :
JMFS027C01+ AATAATGCATCTCAACATAGTTTCATGCTCAATGAGAGGATTTCCCAGGTCTTCAAATTG
JMFS123B09+ AATAATGCATCTCAACATAGTTTCATGCTCAATGAGAGGATTTCCCAGGTCTTCAAATTG
                      ____________________________________________________________
consensus AATAATGCATCTCAACATAGTTTCATGCTCAATGAGAGGATTTCCCAGGTCTTCAAATTG
 
. : . : . : . : . : . :
JMFS027C01+ GCCACATATAATGAATGAGCTTCAAGATCACAGTGCTTGCTCACTCAAAGAATATTTCTA
JMFS123B09+ GCCACATATAATGAATGAGCTTCAAGATCACAGTGCTTGCTCACTCAAAGAATATTTCTA
                      ____________________________________________________________
consensus GCCACATATAATGAATGAGCTTCAAGATCACAGTGCTTGCTCACTCAAAGAATATTTCTA
 
. : . : . : . : . : . :
JMFS027C01+ TAAAGCCAAAATTTTATGGCAAAACTTAATTTTCTCTCTTTGTGAAGAAACTAGTGGAGT
JMFS123B09+ TAAAGCCAAAATTTTATGGCAAAACTTAATTTTCTCTCTTTGTGAAGAAACTAGTGGAGT
                      ____________________________________________________________
consensus TAAAGCCAAAATTTTATGGCAAAACTTAATTTTCTCTCTTTGTGAAGAAACTAGTGGAGT
 
. : . : . : . : . : . :
JMFS027C01+ AAACATAACATTAACCTGGTTTTAAAAACCATTAAGGTAAAAAAAAAAAAAAAAAAGATT
JMFS123B09+ AAACATAACATTAACCTGGTTTTAAAAACCATTAAGGT--AAAAAAAAAAAAAAAAGATT
                      ____________________________________________________________
consensus AAACATAACATTAACCTGGTTTTAAAAACCATTAAGGTAAAAAAAAAAAAAAAAAAGATT
 
. : . : . : . : . : . :
JMFS027C01+ AATAATCCAAAGCCAACAATGAAAATTACTCTCCTCTTCAGCAATTCCAGATAAAACCTG
JMFS123B09+ AATAATCCAAAGCCAACAATGAAAATTACTCTCCTCTTCAGCAATTCCAGATAAAACCTG
                      ____________________________________________________________
consensus AATAATCCAAAGCCAACAATGAAAATTACTCTCCTCTTCAGCAATTCCAGATAAAACCTG
 
. : . : . : . : . : . :
JMFS027C01+ ATAGATTTGGAGTGTCGAGGGAAAACGTTTGGTGAAAATTAGTG
JMFS123B09+ ATAGATTTGGAGTGTCGAGGGAAAACGTTTGGTGAAAATTAGTGTCTTTGATCTATGTTT
                      ____________________________________________________________
consensus ATAGATTTGGAGTGTCGAGGGAAAACGTTTGGTGAAAATTAGTGTCTTTGATCTATGTTT
 
. : . : . : . : . : . :
JMFS123B09+ CCGGTGAGTGTAAATGAGAGATTTTGCAAAGATATTTGGGTGGAGAGAGGGTAGAGAGAG
                      ____________________________________________________________
consensus CCGGTGAGTGTAAATGAGAGATTTTGCAAAGATATTTGGGTGGAGAGAGGGTAGAGAGAG