Contig 003436:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019H03Sequence545004760 (8)dbj|BAE96953.1|1e-103starch branching enzyme I [Ipomoea batatas]715003436 (5)dbj|BAE96954.1|1e-89starch branching enzyme I [Ipomoea batatas]
JMFS068G03Sequence624003436 (5)dbj|BAE96955.1|3e-115starch branching enzyme I [Ipomoea batatas]
JMFS093G06Sequence284003436 (5)
JMSF011L01Sequence433004760 (8)dbj|BAE96956.1|2e-56starch branching enzyme I [Ipomoea batatas]744003436 (5)dbj|BAE96953.1|3e-89starch branching enzyme I [Ipomoea batatas]
JMSF018D09Sequence218004760 (8)dbj|BAE96953.1|4e-08starch branching enzyme I [Ipomoea batatas]796003436 (5)dbj|BAE96956.1|8e-92starch branching enzyme I [Ipomoea batatas]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS068G03- GAAGCTTCTGT
                      ____________________________________________________________
consensus GAAGCTTCTGT
 
. : . : . : . : . : . :
JMFS068G03- TGTTGATCATGGAATTGCACTTGTCAAGATGATTCACTTTCTATCAATGAAATTTAGATA
                      ____________________________________________________________
consensus TGTTGATCATGGAATTGCACTTGTCAAGATGATTCACTTTCTATCAATGAAATTTAGATA
 
. : . : . : . : . : . :
JMFS068G03- CCCTTCTCCTCCTAATGCCATTGATAGGAGAAGGGTATCTAAATTTCATGGGAAATGAGT
                      ____________________________________________________________
consensus CCCTTCTCCTCCTAATGCCATTGATAGGAGAAGGGTATCTAAATTTCATGGGAAATGAGT
 
. : . : . : . : . : . :
JMFS068G03- TTGGCCATCCTGATTGGATTGACTTCCCTAGAGATGGCAACAACTGGAGTTATGAGAAGT
                      ____________________________________________________________
consensus TTGGCCATCCTGATTGGATTGACTTCCCTAGAGATGGCAACAACTGGAGTTATGAGAAGT
 
. : . : . : . : . : . :
JMFS068G03- GCAGACGCCAATGGAATCTTGTGGATACAAATCACTTGAGATACAAGTTCATGAATGCAT
                      ____________________________________________________________
consensus GCAGACGCCAATGGAATCTTGTGGATACAAATCACTTGAGATACAAGTTCATGAATGCAT
 
. : . : . : . : . : . :
JMFS068G03- TTGACAGGGCCATGAATTTGCTTGATGATGAGTTTTCCTTCCTTGCTTCAGAAAAACAGA
                      ____________________________________________________________
consensus TTGACAGGGCCATGAATTTGCTTGATGATGAGTTTTCCTTCCTTGCTTCAGAAAAACAGA
 
. : . : . : . : . : . :
JMFS068G03- TAGTAAGCAGCATAGATGAAGATAATAAGGTAATTGTATTTGAGCGTGGAGATCTGGTAT
rJMSF011L01+ GGTAT
rJMFF019H03+ GGTAT
rJMSF018D09+ GTAAGCAGCATAGATGAAGATAATAAGGTAATTGTA-TTGAGCGTGGAGATCTGGTAT
                      ____________________________________________________________
consensus TAGTAAGCAGCATAGATGAAGATAATAAGGTAATTGTATTTGAGCGTGGAGATCTGGTAT
 
. : . : . : . : . : . :
JMFS068G03- TTGTATTTAACTTTCATCCAGAGAATACATACGAGGGGTATAAAGTTGGATGCGACTTGC
rJMSF011L01+ TTGTATTTAACTTTCATCCAGAGAATACATACGAGGGGTATAAAGTTGGATGCGACTTGC
rJMFF019H03+ TNGTATTTAACTTTCATCCAGAGAATACATACGAGGGGTATAAAGTTGGATGCGACTTGC
rJMSF018D09+ TTGTANTTAACTTTCATCCAGAGAATACATACGAGGGGTATAAAGTTGGATGCGACTTGC
                      ____________________________________________________________
consensus TTGTATTTAACTTTCATCCAGAGAATACATACGAGGGGTATAAAGTTGGATGCGACTTGC
 
. : . : . : . : . : . :
JMFS068G03- CAGGTAAATACCGAGTTGCACTGGATAGTGATGCTTGGGCCTATGGTGGACATGGAAGGG
rJMSF011L01+ CAGGTAAATACCGAGTTGCACTGGATAGTGATGCTTGGGCCTATGGTGGACATGGAAGGG
rJMFF019H03+ CAGGTAAATACCGAGTTGCACTGGATAGTGATGCTTGGGCCTATGGTGGACATGGAAGGG
rJMSF018D09+ CAGGTAAATACCGAGTTGCACTGGATAGTGATGCTTGGGCCTATGGTGGACATGGAAGGG
                      ____________________________________________________________
consensus CAGGTAAATACCGAGTTGCACTGGATAGTGATGCTTGGGCCTATGGTGGACATGGAAGGG
 
. : . : . : . : . : . :
JMFS068G03- TGGGGCATGATGTAGAGCATTTCACATCACCTGAAGGAATACCTGGAGTTCCTGAAACAA
rJMSF011L01+ TGGGGCATGATGTAGAGCATTTCACATCACCTGAAGGAATACCTGGAGTTCCTGAAACAA
rJMFF019H03+ TGGGGCATGATGTAGAGCATTTCACATCACCTGAAGGAATACCTGGAGTTCCTGAAACAA
rJMSF018D09+ TGGGGCATGATGTAGAGCATTTCACATCACCTGAAGGAATACCTGGAGTTCCTGAAACAA
                      ____________________________________________________________
consensus TGGGGCATGATGTAGAGCATTTCACATCACCTGAAGGAATACCTGGAGTTCCTGAAACAA
 
. : . : . : . : . : . :
JMFS068G03- ATTTCAATGGTCGTCCAAACTCTTTCAAAGTACTATCTCCTCCTCAGGCATGCGTGGCCT
rJMSF011L01+ ATTTCAATGGTCGTCCAAACTCTTTCAAAGTACTATCTCCTCCTCAGGCATGCGTGGCCT
rJMFF019H03+ ATTTCAATGGTCGTCCAAACTCTTTCAAAGTACTATCTCCTCCTCAGGCATGCGTGGCCT
rJMSF018D09+ ATTTCAATGGTCGTCCAAACTCTTTCAAAGTACTATCTCCTCCTCAGGCATGCGTGGCCT
                      ____________________________________________________________
consensus ATTTCAATGGTCGTCCAAACTCTTTCAAAGTACTATCTCCTCCTCAGGCATGCGTGGCCT
 
. : . : . : . : . : . :
JMFS068G03- ATTACAGAGTTGA
rJMSF011L01+ ATTACAGAGTTGAAGAAAGCTTAGACGAAGTCCAAGATTCCAGTTTTACTGAGACTATAT
rJMFF019H03+ ATTACAGAGTTGAAGAAAGCTTAGACGAAGTCCAAGATTCCAGTTTTACTGAGACTATAT
rJMSF018D09+ ATTACAGAGTTGAAGAAAGCTTAGACGAAGTCCAAGATTCCAGTTTTACTGAGACTATAT
                      ____________________________________________________________
consensus ATTACAGAGTTGAAGAAAGCTTAGACGAAGTCCAAGATTCCAGTTTTACTGAGACTATAT
 
. : . : . : . : . : . :
rJMSF011L01+ CAACCAATCTAGTGTTGGTAAGTGATGACATTGACGATCTTCAAGAATTGCCCACCGAAA
rJMFF019H03+ CAACCAATCTAGTGTTGGTAAGTGATGACATTGGCGATCTTCAAGAATTGCCCACCGAAA
rJMSF018D09+ CAACCAATCTAGTGTTGGTAAGTGATGACATTGACGATCTTCAAGAATTGCCCACCGAAA
                      ____________________________________________________________
consensus CAACCAATCTAGTGTTGGTAAGTGATGACATTGACGATCTTCAAGAATTGCCCACCGAAA
 
. : . : . : . : . : . :
rJMSF011L01+ ATCTTCAGGAATTGCCTACCATGGGTAATAGTGATGATGTTGACGATCTTCAAGATTTGG
rJMFF019H03+ ATCTTCAGGAATTGCCTACCATGGGTAATAGTGATGATGTTGACGATCTTCAAGATTTGG
rJMSF018D09+ ATCTTCAGGAATTGCCTACCATGGGTAATAGTGATGATGTTGACGATCTTCAAGATTTGG
                      ____________________________________________________________
consensus ATCTTCAGGAATTGCCTACCATGGGTAATAGTGATGATGTTGACGATCTTCAAGATTTGG
 
. : . : . : . : . : . :
rJMSF011L01+ CTGCCATGGGTAATAGTGATGATCTTCAAGAATTGGGTAGCGTGGCTAATAGTATTAGTG
rJMFF019H03+ CTGCCATGGGTAATAGTGATGATCTTCAAGAATTGGGTAGCGTGGCTAATAGTATTAGTG
rJMSF018D09+ CTGCCATGGGTAATAGTGATGATCTTCAAGAATTGGGTAGCGTGGCTAATAGTATTAGTG
                      ____________________________________________________________
consensus CTGCCATGGGTAATAGTGATGATCTTCAAGAATTGGGTAGCGTGGCTAATAGTATTAGTG
 
. : . : . : . : . : . :
rJMSF011L01+ ATGTTGGGCAAAGAAAGGTTCAAGACCTGGAGGAGAACCCCCCGGATCTGGATGATGAGT
rJMFF019H03+ ATGTTGGGCAAAGAAAGGTTCAAGACCTGGAGGAGAACCCCCCGGATCTGGATGATGAGT
rJMSF018D09+ ATGTTGGGCAAAGAAAGGTTCAAGACCTGGAGGAGAACCCCCCGGATCTGGATGATGAGT
JMFS093G06+ GGTTCAAGACCTGGAGGAGAACCCCCCGGATCTGGATGATGAGT
                      ____________________________________________________________
consensus ATGTTGGGCAAAGAAAGGTTCAAGACCTGGAGGAGAACCCCCCGGATCTGGATGATGAGT
 
. : . : . : . : . : . :
rJMSF011L01+ CAGATTCTTGAGGCAGCTATCTATCTATCTATCTTTGAGCCATATTATATGTACAGATGG
rJMFF019H03+ CAGATTCTTGAGGCAGCTATCTATCTATCTATCTTTGAGCCATATTATATGTACAGATGG
rJMSF018D09+ CAGATTCTTGAGGCAGCTATCTATCTATCTATCTTTGAGCCATATTATATGTACAGATGG
JMFS093G06+ CAGATTCTTGAGGCAGCTATCTATCTATCTATCTTTGAGCCATATTATATGTACAGATGG
                      ____________________________________________________________
consensus CAGATTCTTGAGGCAGCTATCTATCTATCTATCTTTGAGCCATATTATATGTACAGATGG
 
. : . : . : . : . : . :
rJMSF011L01+ AAGAGAATCAAGGTTGTCTTGTTATGTTTGATGTTTTTAATTAGAATGGCTGTAAATTTA
rJMFF019H03+ AAGAGAATCAAGGTTGTCTTGTTATGTTTGATGTTTTTAATTAGAATGGCTGTAAATTTA
rJMSF018D09+ AAGAGGATCAAGGTTGTCTTGTTATGTTTGATGTTTTTAATTAGAATGGCTGTAAATTTA
JMFS093G06+ AAGAGAATCAAGGTTGTCTTGTTATGTTTGATGTTTTTAATTAGAATGGCTGTAAATTTA
                      ____________________________________________________________
consensus AAGAGAATCAAGGTTGTCTTGTTATGTTTGATGTTTTTAATTAGAATGGCTGTAAATTTA
 
. : . : . : . : . : . :
rJMSF011L01+ AATATAACCTTGTGAAACTGAATCCATCCATCTTTTGAAGTTGGTCCTTTAATTTGATGT
rJMFF019H03+ AATATAACCTTGTGAAACTGAATCCATCCATCTTT
rJMSF018D09+ AATATAACCTTGTGAAACTGAATCCATCCATCTTTTGAAGTTGGTCCTTTAATTTGATGT
JMFS093G06+ AATATAACCTTGTGAAACTGAATCCATCCATCTTTTGAAGTTGGTCCTTTAATTTGATGT
                      ____________________________________________________________
consensus AATATAACCTTGTGAAACTGAATCCATCCATCTTTTGAAGTTGGTCCTTTAATTTGATGT
 
. : . : . : . : . : . :
rJMSF011L01+ CTGCAATAAAGCAACGGCT
rJMSF018D09+ CTGCAATAAAGCAACGGCT
JMFS093G06+ CTGCAATAAAGCAACGGCTTGTATAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTCTC
                      ____________________________________________________________
consensus CTGCAATAAAGCAACGGCTTGTATAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTCTC