| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011P22 | Sequence | 556 | 003412 (6) | ref|XP_009758418.1| | 4e-50 | PREDICTED: plastidic ATP/ADP-transporter-like [Nicotiana sylvestris] | 755 | 008179 (5) | ref|XP_011035631.1| | 3e-24 | PREDICTED: plastidic ATP/ADP-transporter-like [Populus euphratica] |
| JMFF013G07 | Sequence | 614 | 003412 (6) | ref|XP_009758418.1| | 8e-46 | PREDICTED: plastidic ATP/ADP-transporter-like [Nicotiana sylvestris] | 624 | 008179 (5) | ref|XP_006427151.1| | 2e-62 | hypothetical protein CICLE_v10025170mg [Citrus clementina] gb|ESR40391.1| hypoth |
| JMFS062A01 | Sequence | 638 | 003412 (6) | ref|XP_009758418.1| | 2e-26 | PREDICTED: plastidic ATP/ADP-transporter-like [Nicotiana sylvestris] | |||||
| JMSF005H20 | Sequence | 358 | 003412 (6) | ref|XP_009758418.1| | 4e-16 | PREDICTED: plastidic ATP/ADP-transporter-like [Nicotiana sylvestris] | |||||
| JMSF039M19 | Sequence | 669 | 003412 (6) | ref|XP_009758418.1| | 6e-78 | PREDICTED: plastidic ATP/ADP-transporter-like [Nicotiana sylvestris] | 750 | 008179 (5) | ref|XP_006427151.1| | 3e-64 | hypothetical protein CICLE_v10025170mg [Citrus clementina] gb|ESR40391.1| hypoth |
| JMSF052N11 | Sequence | 679 | 003412 (6) | ref|XP_009758418.1| | 2e-79 | PREDICTED: plastidic ATP/ADP-transporter-like [Nicotiana sylvestris] | |||||
This contig is upended
. : . : . : . : . : . :
JMSF039M19+ ACACATTAGCCAACTTTGTGTATAACAG
JMSF052N11+ TTGACAACACATTAGCCAACTTTGTGTATAACAG
____________________________________________________________
consensus TTGACAACACATTAGCCAACTTTGTGTATAACAG
. : . : . : . : . : . :
JMSF039M19+ CATGAAACCAATAGCCATAGGCAAATTCACCCAAGTTTTCAAGAAAGGAATAATCTCAGC
JMSF052N11+ CATGAAACCAATAGCCATAGGCAAATTCACCCAAGTTTTCAAGAAAGGAATAATCTCAGC
____________________________________________________________
consensus CATGAAACCAATAGCCATAGGCAAATTCACCCAAGTTTTCAAGAAAGGAATAATCTCAGC
. : . : . : . : . : . :
JMSF039M19+ ACTCGATCCTTTTGCTGTGACCACCAACACATCNTTAGTATCCCTAAGAATTGTGTAATT
JMSF052N11+ ACTCGATCCTTTTGCTGTGACCACCAACACATCCTTAGTATCCCTAAGAATTGTGTAATT
JMFF011P22+ TTAGTATCCCTAAGAATTGTGTAATT
JMFF013G07+ GAATTGTGTAATT
____________________________________________________________
consensus ACTCGATCCTTTTGCTGTGACCACCAACACATCCTTAGTATCCCTAAGAATTGTGTAATT
. : . : . : . : . : . :
JMSF039M19+ GAACAGGATACAAAAGAACATCATTCCAAGAGGTATTATTTTCTTAAGGGTCGTAAGCTC
JMSF052N11+ GAACAGGATACAAAAGAACATCATTCCAAGAGGTATTATTTTCTTAAGGGTCGTAAGCTC
JMFF011P22+ GAACAGGATACAAAAGAACATCATTCCAAGAGGTATTATTTTCTTAAGGGTCGTAAGCTC
JMFF013G07+ GAACAGGATACAAAAGAACATCATTCCAAGAGGTATTATTTTCTTAAGGGTCGTAAGCTC
____________________________________________________________
consensus GAACAGGATACAAAAGAACATCATTCCAAGAGGTATTATTTTCTTAAGGGTCGTAAGCTC
. : . : . : . : . : . :
JMSF039M19+ AATACCCAAAAACTTAGGTGACAATGACTCCTGCTCTCCTCCAAAAACCGGTTGCCCATC
JMSF052N11+ AATACCCAAAAACTTAGGTGACAATGACTCCTGCTCTCCTCCAAAAACCGGTTGCCCATC
JMFF011P22+ AATACCCAAAAACTTAGGTGACAATGACTCCTGCTCTCCTCCAAAAACCGGTTGCCCATC
JMFF013G07+ AATACCCAAAAACTTAGGTGACAATGACTCCTGCTCTCCTCCAAAAACCGGTTGCCCATC
JMFS062A01+ AATGACTCCTGCTCTCCTCCAAAAACCGGTTGCCCATC
____________________________________________________________
consensus AATACCCAAAAACTTAGGTGACAATGACTCCTGCTCTCCTCCAAAAACCGGTTGCCCATC
. : . : . : . : . : . :
JMSF039M19+ AGCCGCTGCAGCAGCCTCAGCTCTGCAAATAGGGAAAGTTGGGTTCTTTTGGGCAACCAA
JMSF052N11+ AGCCGCTGCAGCAGCCTCAGCTCTGCAAATAGGGAAAGTTGGGTTCTTTTGGGCAACCAA
JMFF011P22+ AGCCGCTGCAGCAGCCTCAGCTCTGCAAATAGGGAAAGTTGGGTTCTTTTGGGCAACCAA
JMFF013G07+ AGCCGCTGCAGCAGCCTCAGCTCTGCAAATAGGGAAAGTTGGGTTCTTTTGGGCAACCAA
JMSF005H20+ TCTTTTGGGCAACCAA
JMFS062A01+ AGCCGCTGCAGCAGCCTCAGCTCTGCAAATAGGGAAAGTTGGGTTCTTTTGGGCAACCAA
____________________________________________________________
consensus AGCCGCTGCAGCAGCCTCAGCTCTGCAAATAGGGAAAGTTGGGTTCTTTTGGGCAACCAA
. : . : . : . : . : . :
JMSF039M19+ TGAAGAAGGCTTGGTGACAAAGCCGTGAAATTTCTGAAAACCATTGACAGATAGAGAAAA
JMSF052N11+ TGAAGAAGGCTTGGTGACAAAGCCGTGAAATTTCTGAAAACCATTGACAGATAGAGAAAA
JMFF011P22+ TGAAGAAGGCTTGGTGACAAAGCCGTGAAATTTCTGAAAACCATTGACAGATAGAGAAAA
JMFF013G07+ TGAAGAAGGCTTGGTGACAAAGCCGTGAAATTTCTGAAAACCATTGACAGATAGAGAAAA
JMSF005H20+ TGAAGAAGGCTTGGTGACAAAGCCGTGAAATTTCTGAAAACCATTGACAGATAGAGAAAA
JMFS062A01+ TGAAGAAGGCTTGGTGACAAAGCCGTGAAATTTCTGAAAACCATTGACAGATAGAGAAAA
____________________________________________________________
consensus TGAAGAAGGCTTGGTGACAAAGCCGTGAAATTTCTGAAAACCATTGACAGATAGAGAAAA
. : . : . : . : . : . :
JMSF039M19+ GGCATCAAGGGGTTTGGGTTTCAAAGCATTTAAACCATTGAACCTATGCCTTAAGCCCCC
JMSF052N11+ GGCATCAAGGGGTTTGGGTTTCAAAGCATTTAAACCATTGAACCTATGCCTTAAGCCCCC
JMFF011P22+ GGCATCAAGGGGTTTGGGTTTCAAAGCATTTAAACCATTGAACCTATGCCTTAAGCCCCC
JMFF013G07+ GGCATCAAGGGGTTTGGGTTTCAAAGCATTTAAACCATTGAACCTATGCCTTAAGCCCCC
JMSF005H20+ GGCATCAAGGGGTTTGGGTTTCAAAGCATTTAAACCATTGAACCTATGCCTTAAGCCCCC
JMFS062A01+ GGCATCAAGGGGTTTGGGTTTCAAAGCATTTAAACCATTGAACCTATGCCTTAAGCCCCC
____________________________________________________________
consensus GGCATCAAGGGGTTTGGGTTTCAAAGCATTTAAACCATTGAACCTATGCCTTAAGCCCCC
. : . : . : . : . : . :
JMSF039M19+ CTGGGGTTGTGGGTAAAAAGCTTTAAGCTTGGGCTTTGAAGGTAGAGACAGAAGCCCTCT
JMSF052N11+ CTGGGGTTGTGGGTAAAAAGCTTTAAGCTTGGGCTTTGAAGGTAGAGACAGAAGCCCTCT
JMFF011P22+ CTGGGGTTGTGGGTAAAAAGCTTTAAGCTTGGGCTTTGAAGGTAGAGACAGAAGCCCTCT
JMFF013G07+ CTGGGGTTGTGGGTAAAAAGCTTTAAGCTTGGGCTTTGAAGGTAGAGACAGAAGCCCTCT
JMSF005H20+ CTGGGGTTGTGGGTAAAAAGCTTTAAGCTTGGGCTTTGAAGGTAGAGACAGAAGCCCTCT
JMFS062A01+ CTGGGGTTGTGGGTAAAAAGCTTTAAGCTTGGGCTTTGAAGGTAGAGACAGAAGCCCTCT
____________________________________________________________
consensus CTGGGGTTGTGGGTAAAAAGCTTTAAGCTTGGGCTTTGAAGGTAGAGACAGAAGCCCTCT
. : . : . : . : . : . :
JMSF039M19+ GGTCTGCAGAACAGCTTCCATTTCCCACTCTCCCTCTTATCTCTCTATCTCTACGAATCC
JMSF052N11+ GGTCTGCAGAACAGCTTCCATTTCCCACTCTCCCTCTTATCTCTCTATCTCTACGAATCC
JMFF011P22+ GGTCTGCAGAACAGCTTCCATTTCCCACTCTCCCTCTTATCTCTCTATCTCTACGAATCC
JMFF013G07+ GGTCTGCAGAACAGCTTCCATTTCCCACTCTCCCTCTTATCTCTCTATCTCTACGAATCC
JMSF005H20+ GGTCTGCAGAACAGCTTCCATTTCCCACTCTCCCTCTTATCTCTCTATCTCTACGAATCC
JMFS062A01+ GGTCTGCAGAACAGCTTCCATTTCCCACTCTCCCTCTTATCTCTCTATCTCTACGAATCC
____________________________________________________________
consensus GGTCTGCAGAACAGCTTCCATTTCCCACTCTCCCTCTTATCTCTCTATCTCTACGAATCC
. : . : . : . : . : . :
JMSF039M19+ CTTTAAAACCCCAAAGATGTGATCTTTATGAGGTGAGCATGAGAGGAAGAGGAGAGAGAT
JMSF052N11+ CTTTAAAACCCCAAAGATGTGATCTTTATGAGGTGAGCATGAGAGGAAGAGGAGAGAGAT
JMFF011P22+ CTTTAAAACCCCAAAGATGTGATCTTTATGAGGTGAGCATGAGAGGAAGAGGAGAGAGAT
JMFF013G07+ CTTTAAAACCCCAAAGATGTGATCTTTATGAGGTGAGCATGAGAGGAAGAGGAGAGAGAT
JMSF005H20+ CTTTAAAACCCCAAAGATGTGATCTTTATGAGGTGAGCATGAGAGGAAGAGGAGAGAGAT
JMFS062A01+ CTTTAAAACCCCAAAGATGTGATCTTTATGAGGTGAGCATGAGAGGAAGAGGAGAGAGAT
____________________________________________________________
consensus CTTTAAAACCCCAAAGATGTGATCTTTATGAGGTGAGCATGAGAGGAAGAGGAGAGAGAT
. : . : . : . : . : . :
JMSF039M19+ AAGGTTGGGGATTGGGGTTTGAGGAAGAAGAGAGGAAT
JMSF052N11+ AAGGTTGGGGATTGGGGTTTGAGGAAGAAGAGAGGAATGATGA
JMFF011P22+ AAGGTTGGGGATTGGGGTTTGAGGAAGAAGAGAGGAATGATGA
JMFF013G07+ AAGGTTGGGGATTGGGGTTTGAGGAAGAAGAGAGGAATGATGATGAATTACAAGAATCTA
JMSF005H20+ AAGGTTGGGGATTGGGGTTTGAGGAAGAAGAGAGGAATGAT
JMFS062A01+ AAGGTTGGGGATTGGGGTTTGAGGAAGAAGAGAGGAATGATGATGAATTACAAGAATCTA
____________________________________________________________
consensus AAGGTTGGGGATTGGGGTTTGAGGAAGAAGAGAGGAATGATGATGAATTACAAGAATCTA
. : . : . : . : . : . :
JMFF013G07+ TGTAAATTTATATATATATATCCTCTCCTCTCCAGAAACAAAATGAGTTGGTATTAATAA
JMFS062A01+ TGTAAATTTATATATATATATCCTCTCCTCTCCAGAAACAAAATGAGTTGGTATTAATAA
____________________________________________________________
consensus TGTAAATTTATATATATATATCCTCTCCTCTCCAGAAACAAAATGAGTTGGTATTAATAA
. : . : . : . : . : . :
JMFS062A01+ GAAAATAAGAAAGACAGTCCAAATCGGAAGTGTTTAAAAAGAAGTAAAACTGGTAACTAA
____________________________________________________________
consensus GAAAATAAGAAAGACAGTCCAAATCGGAAGTGTTTAAAAAGAAGTAAAACTGGTAACTAA
. : . : . : . : . : . :
JMFS062A01+ ATATTTAAATGGTAAGAAAAAAGCTTAATAAGTTGATAATTGAGCTCTGGGTATTTTTTG
____________________________________________________________
consensus ATATTTAAATGGTAAGAAAAAAGCTTAATAAGTTGATAATTGAGCTCTGGGTATTTTTTG