Contig 003406:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS042F12Sequence641003406 (2)ref|XP_009593140.1|2e-45PREDICTED: K(+) efflux antiporter 2, chloroplastic-like [Nicotiana tomentosifor
JMFS054D11Sequence626003406 (2)ref|XP_009768183.1|4e-74PREDICTED: K(+) efflux antiporter 2, chloroplastic-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS042F12+ CAATTTAGGTAAGTGCTTCCT
                      ____________________________________________________________
consensus CAATTTAGGTAAGTGCTTCCT
 
. : . : . : . : . : . :
JMFS042F12+ AGCTGACTCCATTACACCATGAAAAACAGAAGCTCGTGTGAATTCATCACCATCTGCAGA
                      ____________________________________________________________
consensus AGCTGACTCCATTACACCATGAAAAACAGAAGCTCGTGTGAATTCATCACCATCTGCAGA
 
. : . : . : . : . : . :
JMFS042F12+ AGAGGAGAAGAAGGACGCAGAAAAGAAACGGGATGACTTTTTCAATAAAGCTTTTGGAGC
                      ____________________________________________________________
consensus AGAGGAGAAGAAGGACGCAGAAAAGAAACGGGATGACTTTTTCAATAAAGCTTTTGGAGC
 
. : . : . : . : . : . :
JMFS042F12+ ATTTAATGGTGAGCTATCCCTGGCTAATTCCTTAGGCACTTCCTGTTTTTTACTCTGAAT
                      ____________________________________________________________
consensus ATTTAATGGTGAGCTATCCCTGGCTAATTCCTTAGGCACTTCCTGTTTTTTACTCTGAAT
 
. : . : . : . : . : . :
JMFS042F12+ GTTAGTTGATTTTTCTGAATCCAGTTCACCATCTTTTGAAGAGTCTGGAATGAAGCTATC
                      ____________________________________________________________
consensus GTTAGTTGATTTTTCTGAATCCAGTTCACCATCTTTTGAAGAGTCTGGAATGAAGCTATC
 
. : . : . : . : . : . :
JMFS042F12+ ATCTTGGTCACTTGCATCAGATAAGTGAGATTCATCAAATCTATGGCCACCTATATCCAA
                      ____________________________________________________________
consensus ATCTTGGTCACTTGCATCAGATAAGTGAGATTCATCAAATCTATGGCCACCTATATCCAA
 
. : . : . : . : . : . :
JMFS042F12+ CAGGGTGTCTGCTAAAGGCTCAGCAGTTACCTGGGCATCCTCAACTGATACCTCTCCATG
                      ____________________________________________________________
consensus CAGGGTGTCTGCTAAAGGCTCAGCAGTTACCTGGGCATCCTCAACTGATACCTCTCCATG
 
. : . : . : . : . : . :
JMFS042F12+ CTTTTCACCATTGGCTGGATTTCTTTGGTTCACCTCACCCTCAAGAACTATCTCATCAGC
                      ____________________________________________________________
consensus CTTTTCACCATTGGCTGGATTTCTTTGGTTCACCTCACCCTCAAGAACTATCTCATCAGC
 
. : . : . : . : . : . :
JMFS042F12+ CAATGCCTGTCCTCGTGAAAATCCATTTGTAGCCTCTGTGGGATCGATAAATGAAATTGT
                      ____________________________________________________________
consensus CAATGCCTGTCCTCGTGAAAATCCATTTGTAGCCTCTGTGGGATCGATAAATGAAATTGT
 
. : . : . : . : . : . :
JMFS042F12+ TAGATTCTTCTCAGCTTTCTGTATGGCGATCTCCACATCATTAACATGCTGTGTAGCTTC
JMFS054D11+ GCTTTCTGTATGGCGATCTCCACATCATTAACATGCTGTGTAGCTTC
                      ____________________________________________________________
consensus TAGATTCTTCTCAGCTTTCTGTATGGCGATCTCCACATCATTAACATGCTGTGTAGCTTC
 
. : . : . : . : . : . :
JMFS042F12+ GAGTTCAAATGCAACAGCTTGCTCTGCTAATAGCATTATATTTGCCACATCTTCCTCAGC
JMFS054D11+ GAGTTCAAATGCAACAGCTTGCTCTGCTAATAGCATTATATTTGCCACATCTTCCTCAGC
                      ____________________________________________________________
consensus GAGTTCAAATGCAACAGCTTGCTCTGCTAATAGCATTATATTTGCCACATCTTCCTCAGC
 
. : . : . : . : . : . :
JMFS042F12+ TTTGAGAGCATTCATTTGTG
JMFS054D11+ TTTGAGAGCATTCATTTGTGCTTGCTCTGCAACCTCATTCAACCTGTCAATTTCCTTTTG
                      ____________________________________________________________
consensus TTTGAGAGCATTCATTTGTGCTTGCTCTGCAACCTCATTCAACCTGTCAATTTCCTTTTG
 
. : . : . : . : . : . :
JMFS054D11+ CAGCTCTTCCTTCCTGTTCTCTAACTGCCTCAGGTCAGCTTCACAATTGGCTAAATGATC
                      ____________________________________________________________
consensus CAGCTCTTCCTTCCTGTTCTCTAACTGCCTCAGGTCAGCTTCACAATTGGCTAAATGATC
 
. : . : . : . : . : . :
JMFS054D11+ TCGGCATTTTTCCACATCTTCAAGAGCAGCTAAAAGTGTTTCCTCCTCTTTTGATGATGC
                      ____________________________________________________________
consensus TCGGCATTTTTCCACATCTTCAAGAGCAGCTAAAAGTGTTTCCTCCTCTTTTGATGATGC
 
. : . : . : . : . : . :
JMFS054D11+ TGGCACTTCCTCTTTGCTTTCTCCGGAAGTTTCTAGGGACCCATTCCTTTTTGCAACTTC
                      ____________________________________________________________
consensus TGGCACTTCCTCTTTGCTTTCTCCGGAAGTTTCTAGGGACCCATTCCTTTTTGCAACTTC
 
. : . : . : . : . : . :
JMFS054D11+ CAATGAATCCATTGCCACCTGGAGCCTTGCCTCAGCCAAAGAAACTGCCATGGTTGCTTT
                      ____________________________________________________________
consensus CAATGAATCCATTGCCACCTGGAGCCTTGCCTCAGCCAAAGAAACTGCCATGGTTGCTTT
 
. : . : . : . : . : . :
JMFS054D11+ TTGTACGGCTTCTTTAGCCACAGCTTCTTCATTTAGTGTCTCTTGGATACTATTGAGAGC
                      ____________________________________________________________
consensus TTGTACGGCTTCTTTAGCCACAGCTTCTTCATTTAGTGTCTCTTGGATACTATTGAGAGC
 
. : . : . : . : . : . :
JMFS054D11+ CTTGTTAACATCATTCCAGGCACTTGCTGCTTCATCCTTCAAAGCTATTGCCGCTTCTGA
                      ____________________________________________________________
consensus CTTGTTAACATCATTCCAGGCACTTGCTGCTTCATCCTTCAAAGCTATTGCCGCTTCTGA
 
. : . : . : . : . : . :
JMFS054D11+ TATCCTCTGAGCTTTCTCCTCAAACTTGGTGCTATTAAGCTGTGCAACCTCCAAGTCTGT
                      ____________________________________________________________
consensus TATCCTCTGAGCTTTCTCCTCAAACTTGGTGCTATTAAGCTGTGCAACCTCCAAGTCTGT