Contig 003398:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS002G03+                  GCCCAAGGAGGGAAAAACAGGAGGTCCCTTTGCTTGTAGAACACCGGCAGCTT
                      ____________________________________________________________
consensus                    GCCCAAGGAGGGAAAAACAGGAGGTCCCTTTGCTTGTAGAACACCGGCAGCTT
 
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JMFS002G03+           ATAAATCGTCATAGGAAGCTCAGACATACCGTTGAACATAATCATAACCACCGCGAAAAA
                      ____________________________________________________________
consensus             ATAAATCGTCATAGGAAGCTCAGACATACCGTTGAACATAATCATAACCACCGCGAAAAA
 
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JMFS002G03+           CAGGGCGCCAACATAAATCCCTCCATCAGTCTCATTATTTTTGTGCATTTCAGTTCGGAA
                      ____________________________________________________________
consensus             CAGGGCGCCAACATAAATCCCTCCATCAGTCTCATTATTTTTGTGCATTTCAGTTCGGAA
 
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JMFS002G03+           GAACAGTGTCATTGTAATAAGAGCCATAATGGTAAGCTGGCAGAACTTGAAGACGTAAGC
JMFS088F07+                  GTCATTGTAATAAGAGCCATAATGGTAAGCTGGCAGAACTTGAAGACGTAAGC
                      ____________________________________________________________
consensus             GAACAGTGTCATTGTAATAAGAGCCATAATGGTAAGCTGGCAGAACTTGAAGACGTAAGC
 
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JMFS002G03+           AAATGAGTTTCTCTGCATTAGCAAATACTCTCTCTCAGTGCAAACCTTCAAGAGCTGCTT
JMFS088F07+           AAATGAGTTTCTCTGCATTAGCAAATACTCTCTCTCAGTGCAAACCTTCAAGAGCTGCTT
                      ____________________________________________________________
consensus             AAATGAGTTTCTCTGCATTAGCAAATACTCTCTCTCAGTGCAAACCTTCAAGAGCTGCTT
 
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JMFS002G03+           ACTTCCTATGCCATATTTCTCGTTTGTCAAGGCCGCAGGATGGCTTTTGGTTTTATCGTA
JMFS088F07+           ACTTCCTATGCCATATTTCTCGTTTGTCAAGGCCGCAGGATGGCTTTTGGTTTTATCGTA
                      ____________________________________________________________
consensus             ACTTCCTATGCCATATTTCTCGTTTGTCAAGGCCGCAGGATGGCTTTTGGTTTTATCGTA
 
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JMFS002G03+           CGGTGCCGAAAGCTCCTCTGCTGACCTCCTCCCAACATGGAAAGATTGGTATGCCTCCGC
JMFS088F07+           CGGTGCCGAAAGCTCCTCTGCTGACCTCCTCCCAACATGGAAAGATTGGTATGCCTCCGC
                      ____________________________________________________________
consensus             CGGTGCCGAAAGCTCCTCTGCTGACCTCCTCCCAACATGGAAAGATTGGTATGCCTCCGC
 
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JMFS002G03+           GAATTCCTTAGCCTTCACGAACCTGTAAGGCTCATCTCTACGTATCCAATATTGTTGTTG
JMFS088F07+           GAATTCCTTAGCCTTCACGAACCTGTAAGGCTCATCTCTACGTATCCAATATTGTTGTTG
                      ____________________________________________________________
consensus             GAATTCCTTAGCCTTCACGAACCTGTAAGGCTCATCTCTACGTATCCAATATTGTTGTTG
 
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JMFS002G03+           ATCTTTCTTGGATGTCACTTCTTGCAAGAAA                             
JMFS088F07+           ATCTTTCTTGGATGTCACTTCTTGCAAGAAATCGGCGACGCCTTTTCTGTCGGGGCATCT
                      ____________________________________________________________
consensus             ATCTTTCTTGGATGTCACTTCTTGCAAGAAATCGGCGACGCCTTTTCTGTCGGGGCATCT
 
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JMFS088F07+           GAAGCCCATGGACTCGAAGAAGTCGAGGATGTGTTCGCGAGGGCCCTGGTAAACGAGGTA
JMFS040C02+                   TGGACTCGAAGAAGTCGAGGATGTGTTCGCGAGGGCCCTGGTAAACGAGGTA
JMFS043E03+                                                           GTAAACGAGGTA
                      ____________________________________________________________
consensus             GAAGCCCATGGACTCGAAGAAGTCGAGGATGTGTTCGCGAGGGCCCTGGTAAACGAGGTA
 
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JMFS088F07+           TCCATCCGACAACAAAATAATATCGTCGAACAGGTTGTAGGTCTCGGGCGCGGGTTGGAG
JMFS040C02+           TCCATCCGACAACAAAATAATATCGTCGAACAGGTTGTAGGTCTCGGGCGCGGGTTGGAG
JMFS043E03+           TCCATCCGACAACAAAATAATATCGTCGAACAGGTTGTAGGTCTCGGGCGCGGGTTGGAG
                      ____________________________________________________________
consensus             TCCATCCGACAACAAAATAATATCGTCGAACAGGTTGTAGGTCTCGGGCGCGGGTTGGAG
 
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JMFS088F07+           CAGAGAAATGACGGCGGTTCCCTTGAGAATGTGGACGTACTGCTTAAGCGAATTGACGAT
JMFS040C02+           CAGAGAAATGACGGCGGTTCCCTTGAGAATGTGGACGTACTGCTTAAGCGAATTGACGAT
JMFS043E03+           CAGAGAAATGACGGCGGTTCCCTTGAGAATGTGGACGTACTGCTTAAGCGAATTGACGAT
                      ____________________________________________________________
consensus             CAGAGAAATGACGGCGGTTCCCTTGAGAATGTGGACGTACTGCTTAAGCGAATTGACGAT
 
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JMFS088F07+           GGAATAGGTTGTGGAGCTGTCCAGCCCCGTCGAGATTTCGTCCATGAAAAGAGCTTTCGA
JMFS040C02+           GGAATAGGTTGTGGAGCTGTCCAGCCCCGTCGAGATTTCGTCCATGAAAAGAGCTTTCGA
JMFS043E03+           GGAATAGGTTGTGGAGCTGTCCAGCCCCGTCGAGATTTCGTCCATGAAAAGAGCTTTCGA
                      ____________________________________________________________
consensus             GGAATAGGTTGTGGAGCTGTCCAGCCCCGTCGAGATTTCGTCCATGAAAAGAGCTTTCGA
 
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JMFS088F07+           CGGTCCGACAATCATCTCGCCGGTGGTCACACGCTTTTTCTG                  
JMFS040C02+           CGGTCCGACAATCATCTCGCCGGTGGTCACACGCTTTTTCTGCCCGCCCGATATTCCTCG
JMFS043E03+           CGGTCCGACAATCATCTCGCCGGTGGTCACACGCTTTTTCTGCCCGCCCGATATTCCTCG
                      ____________________________________________________________
consensus             CGGTCCGACAATCATCTCGCCGGTGGTCACACGCTTTTTCTGCCCGCCCGATATTCCTCG
 
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JMFS040C02+           TATCATTTCATCGCCCACCATTGTGTCCGCACAAACTTCCAGTCCCAGAATCTTAAGAAT
JMFS043E03+           TATCATTTCATCGCCCACCATTGTGTCCGCACAAACTTCCAGTCCCAGAATCTTAAGAAT
                      ____________________________________________________________
consensus             TATCATTTCATCGCCCACCATTGTGTCCGCACAAACTTCCAGTCCCAGAATCTTAAGAAT
 
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JMFS040C02+           ATAATCAGTCACCACATTTGCTTCTTGTCCTTCAGTAGCTGCAGCCTTCATGTAAACGTC
JMFS043E03+           ATAATCAGTCACCACATTTGCTTCTTGTCCTTCAGTAGCTGCAGCCTTCATGTAAACGTC
                      ____________________________________________________________
consensus             ATAATCAGTCACCACATTTGCTTCTTGTCCTTCAGTAGCTGCAGCCTTCATGTAAACGTC
 
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JMFS040C02+           AATATCGGGATCTGGTTTGATGTTTGCTGCTTTCTCCCTTCTTGACAATTCCGCCAACAT
JMFS043E03+           AATATCGGGATCTGGTTTGATGTTTGCTGCTTTCTCCCTTCTTGACAATTCCGCCAACAT
                      ____________________________________________________________
consensus             AATATCGGGATCTGGTTTGATGTTTGCTGCTTTCTCCCTTCTTGACAATTCCGCCAACAT
 
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JMFS040C02+           TTCATAACGAGAGCCAACACCCTGGCATCTAGCTGAGAATTCCAAGGTTTCTCGAACTGT
JMFS043E03+           TTCATAACGAGAGCCAACACCCTGGCATCTAGCTGAGAATTCCAAGGTTTCTCGAACTGT
                      ____________________________________________________________
consensus             TTCATAACGAGAGCCAACACCCTGGCATCTAGCTGAGAATTCCAAGGTTTCTCGAACTGT
 
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JMFS040C02+           C                                                           
JMFS043E03+           CATTTCTCCAATATGCAAATCGTGTTGGCTAATATACGCAGCTGTTCTCTGCGGCACAAA
                      ____________________________________________________________
consensus             CATTTCTCCAATATGCAAATCGTGTTGGCTAATATACGCAGCTGTTCTCTGCGGCACAAA
 
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JMFS043E03+           TTCGTCTAACCCATGCCCATTGTACGTCACTCTCCCACCCACCCTCAACGCTTTATCAAG
                      ____________________________________________________________
consensus             TTCGTCTAACCCATGCCCATTGTACGTCACTCTCCCACCCACCCTCAACGCTTTATCAAG