Contig 003384:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005E20Sequence504003384 (10)ref|XP_009760497.1|3e-69PREDICTED: membrane steroid-binding protein 2-like [Nicotiana sylvestris]733003384 (10)ref|XP_009760497.1|3e-70PREDICTED: membrane steroid-binding protein 2-like [Nicotiana sylvestris]
JMFS031A04Sequence332003384 (10)emb|CDP05219.1|4e-21unnamed protein product [Coffea canephora]
JMSF002K08Sequence303003384 (10)emb|CDP05219.1|4e-22unnamed protein product [Coffea canephora]732003384 (10)ref|XP_009760497.1|1e-71PREDICTED: membrane steroid-binding protein 2-like [Nicotiana sylvestris]
JMSF015I02Sequence468003384 (10)emb|CDP05219.1|2e-61unnamed protein product [Coffea canephora]743003384 (10)ref|XP_009760497.1|5e-72PREDICTED: membrane steroid-binding protein 2-like [Nicotiana sylvestris]
JMSF037B23Sequence660003384 (10)ref|XP_009760497.1|8e-91PREDICTED: membrane steroid-binding protein 2-like [Nicotiana sylvestris]670003384 (10)ref|XP_009760497.1|7e-69PREDICTED: membrane steroid-binding protein 2-like [Nicotiana sylvestris]
JMSF051P19Sequence685014789emb|CDP05219.1|1e-41unnamed protein product [Coffea canephora]738003384 (10)ref|XP_009760497.1|8e-47PREDICTED: membrane steroid-binding protein 2-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF051P19- GCAAGATAGCATGGTATGAAATATATG
rJMSF037B23- GTATGAAATATATG
rJMSF002K08- GTATGAAATATATG
rJMSF015I02- GTATGAAATATATG
                      ____________________________________________________________
consensus GCAAGATAGCATGGTATGAAATATATG
 
. : . : . : . : . : . :
rJMSF051P19- CTTCTTTATTTCAATACTTAGATATTCAGACAAGTTGGCTACCTAAGATGTATTCTATAC
rJMSF037B23- CTTCTTTATTTCAATACTTAGATATTCAGACAAGTTGGCTACCTAAGATGTATTCTATAC
rJMSF002K08- CTTCTTTATTTCAATACTTAGATATTCAGACAAGTTGGCTACCTAAGATGTATTCTATAC
rJMSF015I02- CTTCTTTATTTCAATACTTAGATATTCAGACAAGTTGGCTACCTAAGATGTATTCTATAC
rJMFF005E20- ATACTTAGATATTCAGACAAGTTGGCTACCTAAGATGTATTCTATAC
                      ____________________________________________________________
consensus CTTCTTTATTTCAATACTTAGATATTCAGACAAGTTGGCTACCTAAGATGTATTCTATAC
 
. : . : . : . : . : . :
rJMSF051P19- TGGAATTAAAATTTCAGCAAGACAATA-AACAGACAACAAAGCTGCTCTTCCCCATCCCT
rJMSF037B23- TGGAATTAAAATTTCAGCAAGACAATA-AACAGACAACAAAGCTGCTCTTCCCCATCCCT
rJMSF002K08- TGGAATTAAAATTTCAGCAAGACAATA-AACAGACAACAAAGCTGCTCTTCCCCATCCCT
rJMSF015I02- TGGAATTAAAATTTCAGCAAGACAATA-AACAGACAACAAAGCTGCTCTTCCCCATCCCT
rJMFF005E20- TGGAATTANAATTTCAGCAAGACAATAGAACAGACAACAAAGCTGCTCTTCCCCATCCCT
                      ____________________________________________________________
consensus TGGAATTAAAATTTCAGCAAGACAATA-AACAGACAACAAAGCTGCTCTTCCCCATCCCT
 
. : . : . : . : . : . :
rJMSF051P19- CCTTCAACAATCAACTGTTTTCCTCAGTGGCCACATCTACTCCTTTTTCTCAGCATCGAC
rJMSF037B23- CCTTCAACAATCAACTGTTTTCCTCAGTGGCCACATCTACTCCTTTTTCTCAGCATCGAC
rJMSF002K08- CCTTCAACAATCAACTGTTTTCCTCAGTGGCCACATCTACTCCTTTTTCTCAGCATCGAC
rJMSF015I02- CCTTCAACAATCAACTGTTTTCCTCAGTGGCCACATCTACTCCTTTTTCTCAGCATCGAC
rJMFF005E20- CCTTCAACAATCAACTGTTTTCCTCAGTGGCCACATCTACTCCTTTTTCTCAGCATCGAC
                      ____________________________________________________________
consensus CCTTCAACAATCAACTGTTTTCCTCAGTGGCCACATCTACTCCTTTTTCTCAGCATCGAC
 
. : . : . : . : . : . :
rJMSF051P19- GACACCAGATGCATCCCCGTTTTCAGCTGGAACGCTTTCTGATTGAGCGTGTTCGGTGGG
rJMSF037B23- GACACCAGATGCATCCCCGTTTTCAGCTGGAACGCTTTCTGATTGAGCGTGTTCGGTGGG
rJMSF002K08- GACACCAGATGCATCCCCGTTTTCAGCTGGAACGCTTTCTGATTGAGCGTGTTCGGTGGG
rJMSF015I02- GACACCAGATGCATCCCCGTTTTCAGCTGGAACGCTTTCTGATTGAGCGTGTTCGGTGGG
rJMFF005E20- GACACCANATGCATCCCCGTTTTCAGCTGGAACGCTTTCTGATTGAGCGTGTTCGGTGGG
                      ____________________________________________________________
consensus GACACCAGATGCATCCCCGTTTTCAGCTGGAACGCTTTCTGATTGAGCGTGTTCGGTGGG
 
. : . : . : . : . : . :
rJMSF051P19- CTTAGCGCTCTCTGGTGGGCCATCCTCGGCTGGGTTAACACTGCGGTCAGTTGTTGTCTC
rJMSF037B23- CTTAGCGCTCTCTGGTGGGCCATCCTCGGCTGGGTTAACACTGCGGTCAGTTGTTGTCTC
rJMSF002K08- CTTAGCGCTCTCTGGTGGGCCATCCTCGGCTGGGTTAACACTGCGGTCAGTTGTTGTCTC
rJMSF015I02- CTTAGCGCTCTCTGGTGGGCCATCCTCGGCTGGGTTAACACTGCGGTCAGTTGTTGTCTC
rJMFF005E20- CTTANCGCTCTCTGGTGGGCCATCCTCGGCTGGGTTAACACTGCGGTCAGTTGTTGTCTC
JMSF037B23+ TAACACTGCGGTCAGTTGTTGTCTC
                      ____________________________________________________________
consensus CTTAGCGCTCTCTGGTGGGCCATCCTCGGCTGGGTTAACACTGCGGTCAGTTGTTGTCTC
 
. : . : . : . : . : . :
rJMSF051P19- TGAAGGTCCATCTTCGTTAGACGACGTCTCCTGCCCACCTTCTGCCACTGAACTCTTGAC
rJMSF037B23- TGAAGGTCCATCTTCGTTAGACGACGTCTCCTGCCCACCTTCTGCCACTGAACTCTTGAC
rJMSF002K08- TGAAGGTCCATCTTCGTTAGACGACGTCTCCTGCCCACCTTCTGCCACTGAACTCTTGAC
rJMSF015I02- TGAAGGTCCATCTTCGTTAGACGACGTCTCCTGCCCACCTTCTGCCACTGAACTCTTGAC
rJMFF005E20- TGAAGGTCCATCTTCGTTAGACGACGTCTCCTGCCCACCTTCTGCCACTGAACTCTTGAC
JMSF037B23+ TGAAGGTCCATCTTCGTTAGACGACGTCTCCTGCCCACCTTCTGCCACTGAACTCTTGAC
                      ____________________________________________________________
consensus TGAAGGTCCATCTTCGTTAGACGACGTCTCCTGCCCACCTTCTGCCACTGAACTCTTGAC
 
. : . : . : . : . : . :
rJMSF051P19- AGTCCCAACCTTTACATATTTGCTCATGAATTTGTATTCCCAGTCACGTAGTGCATCGAG
rJMSF037B23- AGTCCCAACCTTTACATATTTGCTCATGAATTTGTATTCCCAGTCACGTAGTGCATCGAG
rJMSF002K08- AGTCCCAACCTTTACATATTTGCTCATGAATTTGTATTCCCAGTCACGTAGTGCATCGAG
rJMSF015I02- AGTCCCAACCTTTACATATTTGCTCATGAATTTGTATTCCCAGTCACGTAGTGCATCGAG
rJMFF005E20- AGTCCCAACCTTTACATATTTGCTCATGAATTTGTATTCCCAGTCACGNAGTGCATCGAG
JMSF037B23+ AGTCCCAACCTTTACATATTTGCTCATGAATTTGTATTCCCAGTCACGTAGTGCATCGAG
                      ____________________________________________________________
consensus AGTCCCAACCTTTACATATTTGCTCATGAATTTGTATTCCCAGTCACGTAGTGCATCGAG
 
. : . : . : . : . : . :
rJMSF051P19- CTCGAAAGGACCAAGGCCCGATATGTCACCGGTAAGGTCTTTTTCCTCAAAGGACATCTT
rJMSF037B23- CTCGAAAGGACCAAGGCCCGATATGTCACCGGTAAGGTCTTTTTCCTCAAAGGACATCTT
rJMSF002K08- CTCGAAAGGACCAAGGCCCGATATGTCACCGGTAAGGTCTTTTTCCTCAAAGGACATCTT
rJMSF015I02- CTCGAAAGGACCAAGGCCCGATATGTCACCGGTAAGGTCTTTTTCCTCAAAGGACATCTT
rJMFF005E20- CTCGAAAGGACCAAGGCCCGATATGTCACCGGTAAGGTCTTTTTCCTCAAAGGACATCTT
JMSF037B23+ CTCGAAAGGACCAAGGCCCGATATGTCACCGGTAAGGTCTTTTTCCTCAAAGGACATCTT
JMSF015I02+ CAAAGGACATCTT
JMFF005E20+ AGGCCCGATATGTCACCGGTAAGGTCTTTTTCCTCAAAGGACATCTT
                      ____________________________________________________________
consensus CTCGAAAGGACCAAGGCCCGATATGTCACCGGTAAGGTCTTTTTCCTCAAAGGACATCTT
 
. : . : . : . : . : . :
rJMSF051P19- AGCGAGTGCTCTACTAGCATCCTTTCCGGCAAACAATGCATAAGGTCCCCCGGGTCCATA
rJMSF037B23- AGCGAGTGCTCTACTAGCATCCTTTCCGGCAAACAATGCATAAGGTCCCCCGGGTCCATA
rJMSF002K08- AGCGAGTGCTCTACTAGCATCCTTTCCGGCAAACAATGCATAAGGTCCCCCGGGTCCATA
rJMSF015I02- AGCGAGTGCTCTACTAGCATCCTTTCCGGCAAACAATGCATAAGGTCCCCCGGGTCCATA
rJMFF005E20- AGCGAGTGCTCTACTANCATCCTTTCCGGCAAACAATGCATAAGGTCCCCCGGGTCCATA
JMSF037B23+ AGCGAGTGCTCTACTAGCATCCTTTCCGGCAAACAATGCATAAGGTCCCCCGGGTCCATA
JMSF015I02+ AGCGAGTGCTCTACTAGCATCCTTTCCGGCAAACAATGCATAAGGTCCCCCGGGTCCATA
JMFF005E20+ AGCGAGTGCTCTACTAGCATCCTTTCCGGCAAACAATGCATAAGGTCCCCCGGGTCCATA
                      ____________________________________________________________
consensus AGCGAGTGCTCTACTAGCATCCTTTCCGGCAAACAATGCATAAGGTCCCCCGGGTCCATA
 
. : . : . : . : . : . :
rJMSF051P19- AAACATTCTGC
rJMSF037B23- AAACATTCTGCTTTGTGAAACATCATAGATCTGACTCTTGATAGCCATGAGCAGAGGCTT
rJMSF002K08- AAACATTCTGCTTTGTGAAACATCATAGATCTGACTCTTGATAGCCATGAGCAGAGGCTT
rJMSF015I02- AAACATTCTGCTTTGTGAAACATCATAGATCTGACTCTTGATAGCCATGAGCAGAGGCTT
rJMFF005E20- AAACATTCTGCTTTGTGAAACATCATAGATCTGACTCTTGATANCCATGANCAGAGGCTT
JMSF037B23+ AAACATTCTGCTTTGTGAAACATCATAGATCTGACTCTTGATAGCCATGAGCAGAGGCTT
JMSF015I02+ AAACATTCTGCTTTGTGAAACATCATAGATCTGACTCTTGATAGCCATGAGCAGAGGCTT
JMFF005E20+ AAACATTCTGCTTTGTGAAACATCATAGATCTGACTCTTGATAGCCATGAGCAGAGGCTT
                      ____________________________________________________________
consensus AAACATTCTGCTTTGTGAAACATCATAGATCTGACTCTTGATAGCCATGAGCAGAGGCTT
 
. : . : . : . : . : . :
rJMSF037B23- CTTGGGATCAGAGCCATCGTACTGTTTCAGCTCCTCCTCGGAGATC
rJMSF002K08- CTTGGGATCAGAGCCATCGTACTGTTTCAGCTCCTCCTCGGAGATCTCGCCGAGCTGAAC
rJMSF015I02- CTTGGGATCAGAGCCATCGTACTGTTTCAGCTCCTCCTCGGAGATCTCGCCGAGCTGAAC
rJMFF005E20- CTTGGGATCAGAGCCATCGTACTGTTTCAGCTCCTCCTCGGAGATCTCGCCGAGCTGAAC
JMSF037B23+ CTTGGGATCAGAGCCATCGTACTGTTTCAGCTCCTCCTCGGAGATCTCGCCGAGCTGAAC
JMSF015I02+ CTTGGGATCAGAGCCATCGTACTGTTTCAGCTCCTCCTCGGAGATCTCGCCGAGCTGAAC
JMFF005E20+ CTTGGGATCAGAGCCATCGTACTGTTTCAGCTCCTCCTCGGAGATCTCGCCGAGCTGAAC
JMSF002K08+ CCTCGGAGATCTCGCCGAGCTGAAC
JMFS031A04+ AGCTCCTCCTCGGAGATCTCGCCGAGTTGAAC
                      ____________________________________________________________
consensus CTTGGGATCAGAGCCATCGTACTGTTTCAGCTCCTCCTCGGAGATCTCGCCGAGCTGAAC
 
. : . : . : . : . : . :
rJMSF002K08- CGGCGGCGGCAGGGGCTCCACGTGCTCCTCCACCTCCNTGGGCCTTCCA
rJMSF015I02- CGGCGGCGGCAGGGGCTCCACGTGCTCCTCCACCTCCCTGGGCCTTCCATAGTTGCCTTG
rJMFF005E20- CGGCGGCGGCAGGGGCTCCACGTGCTCCTCCACCTCCCTGGGCCTTCCATAGTTGCCTTG
JMSF037B23+ CGGCGGCGGCAGGGGCTCCACGTGCTCCTCCACCTCCCTGGGCCTTCCATAGTTGCCTTG
JMSF015I02+ CGGCGGCGGCAGGGGCTCCACGTGCTCCTCCACCTCCCTGGGCCTTCCATAGTTGCCTTG
JMFF005E20+ CGGCGGCGGCAGGGGCTCCACGTGCTCCTCCACCTCCCTGGGCCTTCCATAGTTGCCTTG
JMSF002K08+ CGGCGGCGGCAGGGGCTCCACGTGCTCCTCCACCTCCCTGGGCCTTCCATAGTTGCCTTG
JMFS031A04+ CGGCGGCGGCAGGGGCTCCACGTGCTCCTCCACCTCCCTGGGCCTTCCATAGTTGCCTTG
                      ____________________________________________________________
consensus CGGCGGCGGCAGGGGCTCCACGTGCTCCTCCACCTCCCTGGGCCTTCCATAGTTGCCTTG
 
. : . : . : . : . : . :
rJMFF005E20- GTCCGATGATC
JMSF037B23+ GTCCGATGATCCAAACAACCCAGAAGCCACATAGTAGATTGCAAGAATCAGAGCAGAAAC
JMSF015I02+ GTCCGATGATCCAAACAACCCAGAAGCCACATAGTAGATTGCAAGAATCAGAGCAGAAAC
JMFF005E20+ GTCCGATGATCCAAACAACCCAGAAGCCACATAGTAGATTGCAAGAATCAGAGCAGAAAC
JMSF002K08+ GTCCGATGATCCAAACAACCCAGAAGCCACATAGTAGATTGCAAGAATCAGAGCAGAAAC
JMFS031A04+ GTCCGATGATCCAAACAACCCAGAAGCCACATAGTAGATTGCAAGAATCAGAGCAGAACC
                      ____________________________________________________________
consensus GTCCGATGATCCAAACAACCCAGAAGCCACATAGTAGATTGCAAGAATCAGAGCAGAAAC
 
. : . : . : . : . : . :
JMSF037B23+ CGTGAAGAAAGTTGCCGGAGATAGACCCGTGTACGTTGTGATTGCGGCTTTCAGTGTCTC
JMSF015I02+ CGTGAAGAAAGTTGCCGGAGATAGACCCGTGTACGTTGTGATTGCGGCTTTCAGTGTCTC
JMFF005E20+ CGTGAAGAAAGTTGCCGGAGATAGACCCGTGTACGTTGTGATTGCGGCTTTCAGTGTCTC
JMSF002K08+ CGTGAAGAAAGTTGCCGGAGATAGACCCGTGTACGTTGTGATTGCGGCTTTCAGTGTCTC
JMFS031A04+ CGTGAAGAAAGTTGCCGGAGATAGACCCGTGTACGTTGTGATTGCGAGTTTCAGTGTCTC
                      ____________________________________________________________
consensus CGTGAAGAAAGTTGCCGGAGATAGACCCGTGTACGTTGTGATTGCGGCTTTCAGTGTCTC
 
. : . : . : . : . : . :
JMSF037B23+ CCAGAGTTCTATCGCCATGGTGAGAAGAGAGATTGAAAGAGGGGAAGAAAAATCTTCGGA
JMSF015I02+ CCAGAGTTCTATCGCCATGGTGAGAAGAGAGATTGAAAGAGGGGAAGAAAAATCTTCGGA
JMFF005E20+ CCAGAGTTCTATCGCCATGGTGAGAAGAGAGATTGAAAGAGGGGAAGAAAAATCTTCGGA
JMSF002K08+ CCAGAGTTCTATCGCCATGGTGAGAAGAGAGATTGAAAGAGGGGAAGAAAAATCTTCGGA
JMFS031A04+ CCAGAGTTCTATCGCCATGGTGAGAAGAGAGATTGAAAGAGGGGAAGAAAAATCTTCGGA
                      ____________________________________________________________
consensus CCAGAGTTCTATCGCCATGGTGAGAAGAGAGATTGAAAGAGGGGAAGAAAAATCTTCGGA
 
. : . : . : . : . : . :
JMSF037B23+ TAGTCGATAGTATCAAAGAAGACAAAGGGTCAAT
JMSF015I02+ TAGTCGATAGTATCAAAGAAGACAAAGGGTCAAT
JMFF005E20+ TAGTCGATAGTATCAAAGAAGACAAAGGGTCAAT
JMSF002K08+ TAGTCGATAGTATCAAAGAAGACAAAGGGTCAAT
JMFS031A04+ TAGTCGATAGTATCAAAGAAGCCAAAGGGTCAATGCCACGGAAAAGGCAAGATTGGGCCT
                      ____________________________________________________________
consensus TAGTCGATAGTATCAAAGAAGACAAAGGGTCAATGCCACGGAAAAGGCAAGATTGGGCCT