Contig 003380:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031J18Sequence612003380 (9)ref|XP_009596357.1|5e-42PREDICTED: probable transcriptional regulator SLK2 [Nicotiana tomentosiformis]790008350 (4)ref|XP_009599034.1|5e-28PREDICTED: probable transcriptional regulator SLK2, partial [Nicotiana tomentos
JMFF045N13Sequence628003380 (9)ref|XP_009596357.1|3e-43PREDICTED: probable transcriptional regulator SLK2 [Nicotiana tomentosiformis]632008350 (4)ref|XP_009599034.1|1e-24PREDICTED: probable transcriptional regulator SLK2, partial [Nicotiana tomentos
JMFS027E10Sequence589003380 (9)ref|XP_009596357.1|7e-42PREDICTED: probable transcriptional regulator SLK2 [Nicotiana tomentosiformis]
JMFS049A03Sequence605003380 (9)ref|XP_009596357.1|2e-48PREDICTED: probable transcriptional regulator SLK2 [Nicotiana tomentosiformis]
JMFS086H05Sequence633003380 (9)ref|XP_009596357.1|1e-51PREDICTED: probable transcriptional regulator SLK2 [Nicotiana tomentosiformis]
JMFS099A08Sequence632003380 (9)ref|XP_009596357.1|6e-45PREDICTED: probable transcriptional regulator SLK2 [Nicotiana tomentosiformis]
JMFS125D09Sequence566003380 (9)ref|XP_009596357.1|1e-41PREDICTED: probable transcriptional regulator SLK2 [Nicotiana tomentosiformis]
JMFS152G10Sequence611003380 (9)ref|XP_009596357.1|4e-45PREDICTED: probable transcriptional regulator SLK2 [Nicotiana tomentosiformis]
JMSF037B02Sequence681003380 (9)ref|XP_009596357.1|3e-61PREDICTED: probable transcriptional regulator SLK2 [Nicotiana tomentosiformis]760008350 (4)ref|XP_009599034.1|3e-27PREDICTED: probable transcriptional regulator SLK2, partial [Nicotiana tomentos

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF037B02+ CTCCATGCGCGGTCTCTTTTGCAGCTGGGAAATAGTAGGATCTTGAATG
                      ____________________________________________________________
consensus CTCCATGCGCGGTCTCTTTTGCAGCTGGGAAATAGTAGGATCTTGAATG
 
. : . : . : . : . : . :
JMSF037B02+ AATGAACCAGTCCCTCTCAGTCCTTGCCCATTTGGAAGTTGTACCTGACCTATCCTTGAA
JMFS049A03+ CCCATTTGGAAGTTGTACNTGACCTATCCTTGAA
JMFS099A08+ CTGACCTATCCTTGAA
JMFF031J18+ A
JMFF045N13+ TATCCTTGAA
JMFS086H05+ CAGTCCTTGCCCATTTGGAAGTTGTACCTGACCTATCCTTGAA
JMFS152G10+ CTGACCTATCCTTGAA
                      ____________________________________________________________
consensus AATGAACCAGTCCCTCTCAGTCCTTGCCCATTTGGAAGTTGTACCTGACCTATCCTTGAA
 
. : . : . : . : . : . :
JMSF037B02+ CTAGGTAAGGATGTAGCACTTGATGCTCCTCGATGCTGCTGACTTTGCTGAAGTTGTTGA
JMFS049A03+ CTAGGTAAGGATGTAGCACTTGATGCTCCTCGATGCTGCTGACTTTGCTGAAGTTGTTGA
JMFS099A08+ CTAGGTAAGGATGTAGCACTTGATGCTCCTCGATGCTGCTGACTTTGCTGAAGTTGTTGA
JMFS125D09+ TAGGTAAGGATGTAGCACTTGATGCTCCTCGATGCTGCTGACTTTGCTGAAGTTGTTGA
JMFF031J18+ CTAGGTAAGGATGTAGCACTTGATGCTCCTCGATGCTGCTGACTTTGCTGAAGTTGTTGA
JMFF045N13+ CTAGGTAAGGATGTAGCACTGNATGCTCCTCGATGCTGCTGACTTTGCTGAAGTTGTTGA
JMFS086H05+ CTAGGTAAGGATGTAGCACTTGATGCTCCTCGATGCTGCTGACTTTGCTGAAGTTGTTGA
JMFS152G10+ CTAGGTAAGGATGTAGCACTTGATGCTCCTCGATGCTGCTGACTTTGCTGAAGTTGTTGA
JMFS027E10+ TGTAGCACTTGATGCTCCTCGATGCTGCTGACTTTGCTGAAGTTGTTGA
                      ____________________________________________________________
consensus CTAGGTAAGGATGTAGCACTTGATGCTCCTCGATGCTGCTGACTTTGCTGAAGTTGTTGA
 
. : . : . : . : . : . :
JMSF037B02+ GAGGATGGATCTTGGTTTGAGCTTTGCTGAACAACTGAGGATCCATCAATAACAGATGAG
JMFS049A03+ GAGGATGGATCTTGGTTTGAGCTTTGCTGAACAACTGAGGATCCATCAATAACAGATGAG
JMFS099A08+ GAGGATGGATCTTGGTTTGAGCTTTGCTGAACAACTGAGGATCCATCAATAACAGATGAG
JMFS125D09+ GAGGATGGATCTTGGTTTGAGCTTTGCTGAACAACTGAGGATCCATCAATAACAGATGAG
JMFF031J18+ GAGGATGGATCTTGGTTTGAGCTTTGCTGAACAACTGAGGATCCATCAATAACAGATGAG
JMFF045N13+ GAGGATGGATCTTGGTNTGAGCTNTGCTGAACAACTGAGGATCCATCAATAACAGATGAG
JMFS086H05+ GAGGATGGATCTTGGTTTGAGCTTTGCTGAACAACTGAGGATCCATCAATAACAGATGAG
JMFS152G10+ GAGGATGGATCTTGGTTTGAGCTTTGCTGAACAACTGAGGATCCATCAATAACAGATGAG
JMFS027E10+ GAGGATGGATCTTGGTTTGAGCTTTGCTGAACAACTGAGGATCCATCAATAACAGATGAG
                      ____________________________________________________________
consensus GAGGATGGATCTTGGTTTGAGCTTTGCTGAACAACTGAGGATCCATCAATAACAGATGAG
 
. : . : . : . : . : . :
JMSF037B02+ CCAGAAATACTGATATTATTGGAAGTGAATGACATGGGTGACGCAGGCAAACGCATATAA
JMFS049A03+ CCAGAAATACTGATATTATTGGAAGTGAATGACATGGGTGACGCAGGCAAACGCATATAA
JMFS099A08+ CCAGAAATACTGATATTATTGGAAGTGAATGACATGGGTGACGCAGGCAAACGCATATAA
JMFS125D09+ CCAGAAATACTGATATTATTGGAAGTGAATGACATGGGTGACGCAGGCAAACGCATATAA
JMFF031J18+ CCAGAAATACTGATATTATTGGAAGTGAATGACATGGGTGACGCAGGCAAACGCATATAA
JMFF045N13+ CCAGAAATACTGATATTATTGGAAGTGAATGACATGGGTGACGCAGGCAAACGCATATAA
JMFS086H05+ CCAGAAATACTGATATTATTGGAAGTGAATGACATGGGTGACGCAGGCAAACGCATATAA
JMFS152G10+ CCAGAAATACTGATATTATTGGAAGTGAATGACATGGGTGACGCAGGCAAACGCATATAA
JMFS027E10+ CCAGAAATACTGATATTATTGGAAGTGAATGACATGGGTGACGCAGGCAAACGCATATAA
                      ____________________________________________________________
consensus CCAGAAATACTGATATTATTGGAAGTGAATGACATGGGTGACGCAGGCAAACGCATATAA
 
. : . : . : . : . : . :
JMSF037B02+ GATTCTGTATTGATGCTTGCACTTCTTTGAAGATTGGGACCTGCAGAAAGTCCTGAGTTC
JMFS049A03+ GATTCTGTATTGATGCTTGCACTTCTTTGAAGATTGGGACCTGCAGAAAGTCCTGAGTTC
JMFS099A08+ GATTCTGTATTGATGCTTGCACTTCTTTGAAGATTGGGACCTGCAGAAAGTCCTGAGTTC
JMFS125D09+ GATTCTGTATTGATGCTTGCACTTCTTTGAAGATTGGGACCTGCAGAAAGTCCTGAGTTC
JMFF031J18+ GATTCTGTATTGATGCTTGCACTTCTTTGAAGATTGGGACCTGCAGAAAGTCCTGAGTTC
JMFF045N13+ GATTCTGTATTGATGCTTGCACTTCTTTGAAGATTGGGACCTGCAGAAAGTCCTGAGTTC
JMFS086H05+ GATTCTGTATTGATGCTTGCACTTCTTTGAAGATTGGGACCTGCAGAAAGTCCTGAGTTC
JMFS152G10+ GATTCTGTATTGATGCTTGCACTTCTTTGAAGATTGGGACCTGCAGAAAGTCCTGAGTTC
JMFS027E10+ GATTCTGTATTGATGCTTGCACTTCTTTGAAGATTGGGACCTGCAGAAAGTCCTGAGTTC
                      ____________________________________________________________
consensus GATTCTGTATTGATGCTTGCACTTCTTTGAAGATTGGGACCTGCAGAAAGTCCTGAGTTC
 
. : . : . : . : . : . :
JMSF037B02+ GCATCCGTCACTAATGAACTTGCCCCAACACTTGGACCTGAGCTTGCCACACTATTCAAA
JMFS049A03+ GCATCCGTCACTAATGAACTTGCCCCAACACTTGGACCTGAGCTTGCCACACTATTCAAA
JMFS099A08+ GCATCCGTCACTAATGAACTTGCCCCAACACTTGGACCTGAGCTTGCCACACTATTCAAA
JMFS125D09+ GCATCCGTCACTAATGAACTTGCCCCAACACTTGGACCTGAGCTTGCCACACTATTCAAA
JMFF031J18+ GCATCCGTCACTAATGAACTTGCCCCAACACTTGGACCTGAGCTTGCCACACTATTCAAA
JMFF045N13+ GCATCCGTCACTAATGAACTTGCCCCAACACTTGGACCTGAGCTTGCCACACTATTCAAA
JMFS086H05+ GCATCCGTCACTAATGAACTTGCCCCAACACTTGGACCTGAGCTTGCCACACTATTCAAA
JMFS152G10+ GCATCCGTCACTAATGAACTTGCCCCAACACTTGGACCTGAGCTTGCCACACTATTCAAA
JMFS027E10+ GCATCCGTCACTAATGAACTTGCCCCAACACTTGGACCTGAGCTTGCCACACTATTCAAA
                      ____________________________________________________________
consensus GCATCCGTCACTAATGAACTTGCCCCAACACTTGGACCTGAGCTTGCCACACTATTCAAA
 
. : . : . : . : . : . :
JMSF037B02+ ACAGTATCTCCAGACACAGGACCCAGACTTGACCGTGGATTTCCAGGAATTAAATTTGAT
JMFS049A03+ ACAGTATCTCCAGACACAGGACCCAGACTTGACCGTGGATTTCCAGGAATTAAATTTGAT
JMFS099A08+ ACAGTATCTCCAGACACAGGACCCAGACTTGACCGTGGATTTCCAGGAATTAAATTTGAT
JMFS125D09+ ACAGTATCTCCAGACACAGGACCCAGACTTGACCGTGGATTTCCAGGAATTAAATTTGAT
JMFF031J18+ ACAGTATCTCCAGACACAGGACCCAGACTTGACCGTGGATTTCCAGGAATTAAATTTGAT
JMFF045N13+ ACAGTATCTCCAGACACAGGACCCAGACTTGACCGTGGATTTCCAGGAATTAAATTTGAT
JMFS086H05+ ACAGTATCTCCAGACACAGGACCCAGACTTGACCGTGGATTTCCAGGAATTAAATTTGAT
JMFS152G10+ ACAGTATCTCCAGACACAGGACCCAGACTTGACCGTGGATTTCCAGGAATTAAATTTGAT
JMFS027E10+ ACAGTATCTCCAGACACAGGACCCAGACTTGACCGTGGATTTCCAGGAATTAAATTTGAT
                      ____________________________________________________________
consensus ACAGTATCTCCAGACACAGGACCCAGACTTGACCGTGGATTTCCAGGAATTAAATTTGAT
 
. : . : . : . : . : . :
JMSF037B02+ GAATTTGCAAAAGATGAACTTAAGTGGGCATTGCCAACAACTTGTGACTGCCCATCACCT
JMFS049A03+ GAATTTGCAAAAGATGAACTTAAGTGGGCATTGCCAACAACTTGTGACTGCCCATCACCT
JMFS099A08+ GAATTTGCAAAAGATGAACTTAAGTGGGCATTGCCAACAACTTGTGACTGCCCATCACCT
JMFS125D09+ GAATTTGCAAAAGATGAACTTAAGTGGGCATTGCCAACAACTTGTGACTGCCCATCACCT
JMFF031J18+ GAATTTGCAAAAGATGAACTTAAGTGGGCATTGCCAACAACTTGTGACTGCCCATCACCT
JMFF045N13+ GAATTTGCAAAAGATGAACTTAAGTGGGCATTGCCAACAACTTGTGACTGCCCATCACCT
JMFS086H05+ GAATTTGCAAAAGATGAACTTAAGTGGGCATTGCCAACAACTTGTGACTGCCCATCACCT
JMFS152G10+ GAATTTGCAAAAGATGAACTTAAGTGGGCATTGCCAACAACTTGTGACTGCCCATCACCT
JMFS027E10+ GAATTTGCAAAAGATGAACTTAAGTGGGCATTGCCAACAACTTGTGACTGCCCATCACCT
                      ____________________________________________________________
consensus GAATTTGCAAAAGATGAACTTAAGTGGGCATTGCCAACAACTTGTGACTGCCCATCACCT
 
. : . : . : . : . : . :
JMSF037B02+ TGGAAAAAGATGCCAGAAGTAGAAGGAGATTGTGCAATACCTCCCGTCACCCGAGAATGC
JMFS049A03+ TGGAAAAAGATGCCAGAAGTAGAAGGAGATTGTGCAATACCTCCCGTCACCCGAGAATGC
JMFS099A08+ TGGAAAAAGATGCCAGAAGTAGAAGGAGATTGTGCAATACCTCCCGTCACCCGAGAATGC
JMFS125D09+ TGGAAAAAGATGCCAGAAGTAGAAGGAGATTGTGCAATACCTCCCGTCACCCGAGAATGC
JMFF031J18+ TGGAAAAAGATGCCAGAAGTAGAAGGAGATTGTGCAATACCTCCCGTCACCCGAGAATGC
JMFF045N13+ TGGAAAAAGATGCCAGAAGTAGAAGGAGATTGTGCAATACCTCCCGTCACCCGAGAATGC
JMFS086H05+ TGGAAAAAGATGCCAGAAGTAGAAGGAGATTGTGCAATACCTCCCGTCACCCGAGAATGC
JMFS152G10+ TGGAAAAAGATGCCAGAAGTAGAAGGAGATTGTGCAATACCTCCCGTCACCCGAGAATGC
JMFS027E10+ TGGAAAAAGATGCCAGAAGTAGAAGGAGATTGTGCAATACCTCCCGTCACCCGAGAATGC
                      ____________________________________________________________
consensus TGGAAAAAGATGCCAGAAGTAGAAGGAGATTGTGCAATACCTCCCGTCACCCGAGAATGC
 
. : . : . : . : . : . :
JMSF037B02+ ACCATTGCTGGGGCATTCCCCTGATAACCAGAATCCAAATAGCTCTCCAGTGCCAGACCT
JMFS049A03+ ACCATTGCTGGGGCATTCCCCTGATAACCAGAATCCAAATAGCTCTCCAGTGCCAGACCT
JMFS099A08+ ACCATTGCTGGGGCATTCCCCTGATAACCAGAATCCAAATAGCTCTCCAGTGCCAGACCT
JMFS125D09+ ACCATTGCTGGGGCATTCCCCTGATAACCAGAATCCAAATAGCTCTCCAGTGCCAGACCT
JMFF031J18+ ACCATTGCTGGGGCATTCCCCTGATAACCAGAATCCAAATAGCTCTCCAGTGCCAGACCT
JMFF045N13+ ACCATTGCTGGGGCATTCCCCTGATAACCAGAATCCAAATAGCTCTCCAGTGCCAGACCT
JMFS086H05+ ACCATTGCTGGGGCATTCCCCTGATAACCAGAATCCAAATAGCTCTCCAGTGCCAGACCT
JMFS152G10+ ACCATTGCTGGGGCATTCCCATGATAACCAGAATCCAAATAGCTCTCCAGTGCCAGACCT
JMFS027E10+ ACCATTGCTGGGGCATTCCCCTGATAACCAGAATCCAAATAGCTCTCCAGTGCCAGACCT
                      ____________________________________________________________
consensus ACCATTGCTGGGGCATTCCCCTGATAACCAGAATCCAAATAGCTCTCCAGTGCCAGACCT
 
. : . : . : . : . : . :
JMSF037B02+ TTCGCGGATTCTCCTCGAGACAACGAACTGC
JMFS049A03+ TTCGCGGATTCTCCTCGAGACAACGAACTGC
JMFS099A08+ TTCGCGGATTCTCCT
JMFS125D09+ TTCGCGGATTCTCCTCGAGACAACGAA
JMFF031J18+ TTCGCGGATTCTCCT
JMFF045N13+ TTCGCGGATTCTCCT
JMFS086H05+ TTCGCGGATTCTCCTCGAGACAACGAACTGCGAGAGCGAAAGTGAATTTT
JMFS152G10+ TTCGCGGATTCTCCTCGAGACAACGAACTGCGAGAGCGAAAGTGAATTTTTT
JMFS027E10+ TTCGCGGATTCTCCTCGAGACAACGAACTGCGAGAGCGAAAGTGAATTTTTTGAGAAGCT
                      ____________________________________________________________
consensus TTCGCGGATTCTCCTCGAGACAACGAACTGCGAGAGCGAAAGTGAATTTTTTGAGAAGCT