Contig 003378:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS025D06Sequence623003378 (5)gb|KDO53031.1|5e-78hypothetical protein CISIN_1g0468492mg, partial [Citrus sinensis]
JMFS073C07Sequence622003378 (5)gb|KDO53031.1|2e-79hypothetical protein CISIN_1g0468492mg, partial [Citrus sinensis]
JMFS100B03Sequence627003378 (5)emb|CDP11026.1|8e-115unnamed protein product [Coffea canephora]
JMFS117H01Sequence584003378 (5)gb|KDO53031.1|1e-79hypothetical protein CISIN_1g0468492mg, partial [Citrus sinensis]
JMSF048A21Sequence689003378 (5)gb|KDO53031.1|7e-96hypothetical protein CISIN_1g0468492mg, partial [Citrus sinensis]685015173ref|XP_009776153.1|2e-70PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD2-like isoform

Alignment

This contig is upended


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JMFS100B03+            TCATGTCCCAACTTAAAGTATCTTAGGTGAGCATCCATAATTGCACTAAAAGATTCCAA
                      ____________________________________________________________
consensus              TCATGTCCCAACTTAAAGTATCTTAGGTGAGCATCCATAATTGCACTAAAAGATTCCAA
 
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JMFS100B03+           AAACTCGTGCTTCTTTCTTGCCTCAACATTCATGAGAGCATTTACTAAATTAAAGCGGCT
JMSF048A21+                                CTCAACATTCATGAGAGCATTTACTAAATTAAAGCGGCT
                      ____________________________________________________________
consensus             AAACTCGTGCTTCTTTCTTGCCTCAACATTCATGAGAGCATTTACTAAATTAAAGCGGCT
 
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JMFS100B03+           TCTTTCAAAAGCTGACTTTGAATTGTGTAGGTCTTCTTCGAGTTCAGTAATAACATCATC
JMSF048A21+           TCTTTCAAAAGCTGACTTTGAATTGTGTAGGTCTTCTTCGAGTTCAGTAATAACATCATC
JMFS073C07+                                                TCGAGTTCAGTAATAACATCATC
JMFS117H01+                                                TCGAGTTCAGTAATAACATCATC
JMFS025D06+                                                TCGAGTTCAGTAATAACATCATC
                      ____________________________________________________________
consensus             TCTTTCAAAAGCTGACTTTGAATTGTGTAGGTCTTCTTCGAGTTCAGTAATAACATCATC
 
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JMFS100B03+           GCGTGTACTCTTCTTTAACGAGGCAAACTTTTCACGTGCCTGGTCATAAGCAGTTGTTGC
JMSF048A21+           GCGTGTACTCTTCTTTAACGAGGCAAACTTTTCACGTGCCTGGTCATAAGCAGTTGTTGC
JMFS073C07+           GCGTGTACTCTTCTTTAACGAGGCAAACTTTTCACGTGCCTGGTCATAAGCAGTTGTTGC
JMFS117H01+           GCGTGTACTCTTCTTTAACGAGGCAAACTTTTCACGTGCCTGGTCATAAGCAGTTGTTGC
JMFS025D06+           GCGTGTACTCTTCTTTAACGAGGCAAACTTTTCACGTGCCTGGTCATAAGCAGTTGTTGC
                      ____________________________________________________________
consensus             GCGTGTACTCTTCTTTAACGAGGCAAACTTTTCACGTGCCTGGTCATAAGCAGTTGTTGC
 
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JMFS100B03+           TTTGTCAAATCTGCGACGAGATTCCTTGACATCTTGAAGACCAACAGACAAAAGTTCAGT
JMSF048A21+           TTTGTCAAATCTGCGACGAGATTCCTTGACATCTTGAAGACCAACAGACAAAAGTTCAGT
JMFS073C07+           TTTGTCAAATCTGCGACGAGATTCCTTGACATCTTGAAGACCAACAGACAAAAGTTCAGT
JMFS117H01+           TTTGTCAAATCTGCGACGAGATTCCTTGACATCTTGAAGACCAACAGACAAAAGTTCAGT
JMFS025D06+           TTTGTCAAATCTGCGACGAGATTCCTTGACATCTTGAAGACCAACAGACAAAAGTTCAGT
                      ____________________________________________________________
consensus             TTTGTCAAATCTGCGACGAGATTCCTTGACATCTTGAAGACCAACAGACAAAAGTTCAGT
 
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JMFS100B03+           CAAGCGATCAACAAGTACATGCTCCACCTGAGAACGGAGAAGTTCCTTATATGTAGCAAG
JMSF048A21+           CAAGCGATCAACAAGTACATGCTCCACCTGAGAACGGAGAAGTTCCTTATATGTAGCAAG
JMFS073C07+           CAAGCGATCAACAAGTACATGCTCCACCTGAGAACGGAGAAGTTCCTTATATGTAGCAAG
JMFS117H01+           CAAGCGATCAACAAGTACATGCTCCACCTGAGAACGGAGAAGTTCCTTATATGTAGCAAG
JMFS025D06+           CAAGCGATCAACAAGTACATGCTCCACCTGAGAACGGAGAAGTTCCTTATATGTAGCAAG
                      ____________________________________________________________
consensus             CAAGCGATCAACAAGTACATGCTCCACCTGAGAACGGAGAAGTTCCTTATATGTAGCAAG
 
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JMFS100B03+           CTCTCGAAATGCAGAAACAAATTTTGACATGATTGGGCCTCCAATTGACACACTGAGAGG
JMSF048A21+           CTCTCGAAATGCAGAAACAAATTTTGACATGATTGGGCCTCCAATTGACACACTGAGAGG
JMFS073C07+           CTCTCGAAATGCAGAAACAAATTTTGACATGATTGGGCCTCCAATTGACACACTGAGAGG
JMFS117H01+           CTCTCGAAATGCAGAAACAAATTTTGACATGATTGGGCCTCCAATTGACACACTGAGAGG
JMFS025D06+           CTCTCGAAATGCAGAAACAAATTTTGACATGATTGGGCCTCCAATTGACACACTGAGAGG
                      ____________________________________________________________
consensus             CTCTCGAAATGCAGAAACAAATTTTGACATGATTGGGCCTCCAATTGACACACTGAGAGG
 
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JMFS100B03+           ATCGTCGTGACCTCCACCGAATACCTCCAATGAATCTGCAAAGATATTGTCACCATTGTG
JMSF048A21+           ATCGTCGTGACCTCCACCGAATACCTCCAATGAATCTGCAAAGATATTGTCACCATTGTG
JMFS073C07+           ATCGTCGTGACCTCCACCGAATACCTCCAATGAATCTGCAAAGATATTGTCACCATTGTG
JMFS117H01+           ATCGTCGTGACCTCCACCGAATACCTCCAATGAATCTGCAAAGATATTGTCACCATTGTG
JMFS025D06+           ATCGTCGTGAACTCCACCGAATACCTCCAATGAATCTGCAAAGATATTGTCACCATTGTG
                      ____________________________________________________________
consensus             ATCGTCGTGACCTCCACCGAATACCTCCAATGAATCTGCAAAGATATTGTCACCATTGTG
 
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JMFS100B03+           TGCTTCTCCAAGAGTGTCAGTGTATTTCTTACACCCCTTGTATAGCTTATGGCAGCGGTC
JMSF048A21+           TGCTTCTCCAAGAGTGTCAGTGTATTTCTTACACCCCTTGTATAGCTTATGGCAGCGGTC
JMFS073C07+           TGCTTCTCCAAGAGTGTCAGTGTATTTCTTACACCCCTTGTATAGCTTATGGCAGCGGTC
JMFS117H01+           TGCTTCTCCAAGAGTGTCAGTGTATTTCTTACACCCCTTGTATAGCTTATGGCAGCGGTC
JMFS025D06+           TGCTTCTCCAAGAGTGTCAGTGTATTTCTTACACCCCTTGTATAGCTTATGGCAGCGGTC
                      ____________________________________________________________
consensus             TGCTTCTCCAAGAGTGTCAGTGTATTTCTTACACCCCTTGTATAGCTTATGGCAGCGGTC
 
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JMFS100B03+           TCTCAGCTCATCTGTAGTATGTTCCAAAGATCTCACTTGTTTATGGAACATAGGAGAATC
JMSF048A21+           TCTCAGCTCATCTGTAGTATGTTCCAAAGATCTCACTTGTTTATGGAACATAGGAGAATC
JMFS073C07+           TCTCAGCTCATCTGTAGTATGTTCCAAAGATCTCACTTGTTTATGGAACATAGGAGAATC
JMFS117H01+           TCTCAGCTCATCTGTAGTATGTTCCAAAGATCTCACTTGTTTATGGAACATAGGAGAATC
JMFS025D06+           TCTCAGCTCATCTGTAGTATGTTCCAAAGATCTCACTTGTTTATGGAACATAGGAGAATC
                      ____________________________________________________________
consensus             TCTCAGCTCATCTGTAGTATGTTCCAAAGATCTCACTTGTTTATGGAACATAGGAGAATC
 
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JMFS100B03+           CTCCAACTTCATAAACGCAGCCATTCTG                                
JMSF048A21+           CTCCAACTTCATAAACGCAGCCATTCTGCTGTGTCTGAGAGCTACAGGGAAGTTTAGTTT
JMFS073C07+           CTCCAACTTCATAAACGCAGCCATTCTGCTGTGTCTGAGAGCTACAGGGAAGTTTAGTTT
JMFS117H01+           CTCCAACTTCATAAACGCAGCCATTCTGCTGTGTCTGAGAGCTACAGGGAAGTTTAGTTT
JMFS025D06+           CTCCAACTTCATAAACGCAGCCATTCTGCTGTGTCTGAGAGCTACAGGGAAGTTTAGTTT
                      ____________________________________________________________
consensus             CTCCAACTTCATAAACGCAGCCATTCTGCTGTGTCTGAGAGCTACAGGGAAGTTTAGTTT
 
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JMSF048A21+           CAGAGTTTCAGATCGAGATATGGAGATGGAGCATGCTGTCATGGGCTTTTATGTCATTTG
JMFS073C07+           CAGAGTTTCAGATCGAGATATGGAGATGGAGCATGCTGTCATGGGCTTTTATGTCATTTG
JMFS117H01+           CAGAGTTTCAGATCGAGATATGGAGATGGAGCATGCTGTCATGGGCTTTTATGTCATTTG
JMFS025D06+           CAGAGTTTCAGATCGAGATATGGAGATGGAGCATGCTGTCATGGGCTTTTATGTCATTTG
                      ____________________________________________________________
consensus             CAGAGTTTCAGATCGAGATATGGAGATGGAGCATGCTGTCATGGGCTTTTATGTCATTTG
 
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JMSF048A21+           GATGCCACCGCTGGCTCGTCATTCGTCAATCTCATTATAATAAAATTTC           
JMFS073C07+           GATGCCACCGCTGGCTCGTCATTCGTCAATCTCATTATAATAAAATTTCAAGTGTTCCA 
JMFS117H01+           GATGCCACCGCTGGCTCGTCA                                       
JMFS025D06+           GATGCCACCGCTGGCTCGTCATTCGTCAATCTCATTATAATAAAATTTCAAGTGTTCCAC
                      ____________________________________________________________
consensus             GATGCCACCGCTGGCTCGTCATTCGTCAATCTCATTATAATAAAATTTCAAGTGTTCCAC