Contig 003373:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF034K16+                                                                GAGCCGG
                      ____________________________________________________________
consensus                                                                  GAGCCGG
 
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JMSF034K16+           TTAATTATCATCTCTATATCACTGTTGAATCCCATAGTTATAGTTACTTCATTCTCAGGC
                      ____________________________________________________________
consensus             TTAATTATCATCTCTATATCACTGTTGAATCCCATAGTTATAGTTACTTCATTCTCAGGC
 
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JMSF034K16+           ACTAAAGCATTTTGGTAGGTATCCCAAACAGTAATGTTCTCTTTCTCAGGGTCTAAAGCA
                      ____________________________________________________________
consensus             ACTAAAGCATTTTGGTAGGTATCCCAAACAGTAATGTTCTCTTTCTCAGGGTCTAAAGCA
 
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JMSF034K16+           GTTCTTTTTTTGCCCGCCAGGATCCATTCTTCAACATGCTCAATATCTCTTACCACATGT
                      ____________________________________________________________
consensus             GTTCTTTTTTTGCCCGCCAGGATCCATTCTTCAACATGCTCAATATCTCTTACCACATGT
 
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JMSF034K16+           TTCAAGGTCTGATGAAGTTCTTCACTAGCCTGAGTAGCCTCAAATACATACCCTTTCACG
                      ____________________________________________________________
consensus             TTCAAGGTCTGATGAAGTTCTTCACTAGCCTGAGTAGCCTCAAATACATACCCTTTCACG
 
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JMSF034K16+           TTTGCTGCCAAATATACTCGTCTCAGTTTATATTCTATTTCATTTTCGTAATAACTACTA
                      ____________________________________________________________
consensus             TTTGCTGCCAAATATACTCGTCTCAGTTTATATTCTATTTCATTTTCGTAATAACTACTA
 
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JMSF034K16+           GAAATTCTAGATCGGATTGCGTCATGCAGAAATGAAATAGTAGTTATACACCTGGTGTCC
JMFF005K07+                                                                      C
JMFS020E02+                                                                      C
                      ____________________________________________________________
consensus             GAAATTCTAGATCGGATTGCGTCATGCAGAAATGAAATAGTAGTTATACACCTGGTGTCC
 
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JMSF034K16+           CCGTCATTCATTTTGGTGTCACATTCCTCCAAAAAGGTTTGCAGAATGCAGAGCTTTGCA
JMFS125H10+                                      TCCAAAAAGGCTTGCATAAAGCAGAGCTTTGCA
JMFF005K07+           CCGTCATTCATTTTGGTCTTAAGTTCTTCCAAAAAGGCTTGCATAAAGCAGAGCTTTGCA
JMFS020E02+           CCGTCATTCATTTTGGTGTCACATTCCTCCAAAAAGGTTTGCAGAATGCAGAGCTTTGCA
                      ____________________________________________________________
consensus             CCGTCATTCATTTTGGTGTCACATTCCTCCAAAAAGGTTTGCATAATGCAGAGCTTTGCA
 
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JMSF034K16+           GACAGAAACTCGATCGTTTTAAGCAGCGACACCTTCATTCCTCCGGCATCAAAAATCAAA
JMFS125H10+           GACAGCAATTCGATTGTTTCAAGCAGCGCCACCATCAATCCTCCGGCATCAAAAATCGAA
JMFF005K07+           GACAGCAACTCGATTGTTTCAAGCAGCGCCACCATCAATCCTCCGGCATCAAAAATCGAA
JMFS020E02+           GACAGAAACTCGATCGTTTTAAGCAGCGACACCTTCATTCCTCCGGCATCAAAAATCAAA
                      ____________________________________________________________
consensus             GACAGCAACTCGATTGTTTTAAGCAGCGCCACCTTCATTCCTCCGGCATCAAAAATCGAA
 
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JMSF034K16+           AGTAGTGTGGGATCCACAAGGTCTTGCTCTACTATTTTGATTAGAGTGGTTACAGCATCA
JMFS125H10+           AGTAGTTTGGGCTCCACAAGGTCTTGCTCTACTATTTTGATTAGGCTAGTTAGAGCTTCT
JMFF005K07+           AGTAGTTTGGGCTCCACAAGGTCTTGCTCTACTATTTTGATTAGGCTAGTTAGAGCATCA
JMFS020E02+           AGTAGTGTGGGATCCACAAGGTCTTGCTCTACTATTTTGATTAGAGTGGTTACAGCATCA
                      ____________________________________________________________
consensus             AGTAGTTTGGGCTCCACAAGGTCTTGCTCTACTATTTTGATTAGGGTGGTTAGAGCATCA
 
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JMSF034K16+           AAAGCCATT                                                   
JMFS125H10+           AATGCCATTATATTGAACTTCCATAAAGTGTTTATGGAACT                   
JMFF005K07+           AATGCCATTATATTGAACTTCCCTAAAGTGTTTCTGGAACTTAGGTTGA           
JMFS020E02+           AAAGCCATTATATTAAACTTCCCTAAAGTGTTTCTGGAACTGGTATCAGAGAGTTATTAT
                      ____________________________________________________________
consensus             AATGCCATTATATTGAACTTCCCTAAAGTGTTTCTGGAACTTGTGTTGGAGAGTTATTAT
 
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JMFS020E02+           TAGTCTCAATTATTGAGCTAGAAAATAGCAGAGTAATGGTGCTTGCAAGATGGGTTAAAA
                      ____________________________________________________________
consensus             TAGTCTCAATTATTGAGCTAGAAAATAGCAGAGTAATGGTGCTTGCAAGATGGGTTAAAA
 
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JMFS020E02+           CCTAAAGTTTTAAAATGGCGCACCTTAAGTACACAAATCAGTGCACACAAACAAAACACC
                      ____________________________________________________________
consensus             CCTAAAGTTTTAAAATGGCGCACCTTAAGTACACAAATCAGTGCACACAAACAAAACACC
 
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JMFS020E02+           TTAAGAACATAAAACACGCACCTAAAGTTTTAAAATGGCGTACCTTAAATTTCAACAACT
                      ____________________________________________________________
consensus             TTAAGAACATAAAACACGCACCTAAAGTTTTAAAATGGCGTACCTTAAATTTCAACAACT
 
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JMFS020E02+           GATGCACCTTAAGCATACAAATCACGTACCTTAAGAAGGAAAACAACGCACCTTACGAAG
                      ____________________________________________________________
consensus             GATGCACCTTAAGCATACAAATCACGTACCTTAAGAAGGAAAACAACGCACCTTACGAAG
 
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JMFS020E02+           AAAAACCATGCACCTAAAACTTTAGGCCGACGCACCTTAAGCACACAAATCACGCACCTT
                      ____________________________________________________________
consensus             AAAAACCATGCACCTAAAACTTTAGGCCGACGCACCTTAAGCACACAAATCACGCACCTT