Contig 003328:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN016E21Sequence608003328 (4)ref|XP_009766622.1|9e-67PREDICTED: acyl carrier protein 1, mitochondrial [Nicotiana sylvestris]
JMFN018C23Sequence573003328 (4)ref|XP_009766622.1|7e-67PREDICTED: acyl carrier protein 1, mitochondrial [Nicotiana sylvestris]
JMFN018E17Sequence587003328 (4)ref|XP_009766622.1|7e-67PREDICTED: acyl carrier protein 1, mitochondrial [Nicotiana sylvestris]
JMFN034C12Sequence620003328 (4)ref|XP_009766622.1|1e-66PREDICTED: acyl carrier protein 1, mitochondrial [Nicotiana sylvestris]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018C23+                   AAAGTAAGGAGTCCAAAGCTTCCAGAATGACTATCTGTCCACCATAATGATT
JMFN018E17+               GAAAAAAGTAAGGAGTCCAAAGCTTCCAGAATGACTATCTGTCCACCATAATGATT
                      ____________________________________________________________
consensus                 GAAAAAAGTAAGGAGTCCAAAGCTTCCAGAATGACTATCTGTCCACCATAATGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018C23+           ATTGGATATTTCCTTATGGATCAGGTTTCCATGATCTTCCACAAATCAGAACATCACAAG
JMFN018E17+           ATTGGATATTTCCTTATGGATCAGGTTTCCATGATCTTCCACAAATCAGAACATCACAAG
                      ____________________________________________________________
consensus             ATTGGATATTTCCTTATGGATCAGGTTTCCATGATCTTCCACAAATCAGAACATCACAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018C23+           TCACAACCATTCCCAAACAAAACTCAAAATCAAGGCTCTGCTTAAAACCTTAACCTGCCA
JMFN018E17+           TCACAACCATTCCCAAACAAAACTCAAAATCAAGGCTCTGCTTAAAACCTTAACCTGCCA
JMFN034C12+                                                           CTTAACCTGCCA
JMFN016E21+                                                           CTTAACCTGCCA
                      ____________________________________________________________
consensus             TCACAACCATTCCCAAACAAAACTCAAAATCAAGGCTCTGCTTAAAACCTTAACCTGCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018C23+           TCGGATGGTTATAAATATACTCAATTGCAAGTGTGCATGAGTCGATCCTAACAGCCTCCT
JMFN018E17+           TCGGATGGTTATAAATATACTCAATTGCAAGTGTGCATGAGTCGATCCTAACAGCCTCCT
JMFN034C12+           TCGGATGGTTATAAATATACTCAATTGCAAGTGTGCATGAGTCGATCCTAACAGCCTCCT
JMFN016E21+           TCGGATGGTTATAAATATACTCAATTGCAAGTGTGCATGAGTCGATCCTAACAGCCTCCT
                      ____________________________________________________________
consensus             TCGGATGGTTATAAATATACTCAATTGCAAGTGTGCATGAGTCGATCCTAACAGCCTCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018C23+           TGTCTGGAATTTCAAGTTTGAACTCTTCCTCGAGAGCCATTACAATCTCAACATTGTCTA
JMFN018E17+           TGTCTGGAATTTCAAGTTTGAACTCTTCCTCGAGAGCCATTACAATCTCAACATTGTCTA
JMFN034C12+           TGTCTGGAATTTCAAGTTTGAACTCTTCCTCGAGAGCCATTACAATCTCAACATTGTCTA
JMFN016E21+           TGTCTGGAATTTCAAGTTTGAACTCTTCCTCGAGAGCCATTACAATCTCAACATTGTCTA
                      ____________________________________________________________
consensus             TGTCTGGAATTTCAAGTTTGAACTCTTCCTCGAGAGCCATTACAATCTCAACATTGTCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018C23+           AGCTGTCTAAGCCCAGATCCTTCTGGAAATGGACATCAGGAGTGACCTTGGAGGGATCGA
JMFN018E17+           AGCTGTCTAAGCCCAGATCCTTCTGGAAATGGACATCAGGAGTGACCTTGGAGGGATCGA
JMFN034C12+           AGCTGTCTAAGCCCAGATCCTTCTGGAAATGGACATCAGGAGTGACCTTGGAGGGATCGA
JMFN016E21+           AGCTGTCTAAGCCCAGATCCTTCTGGAAATGGACATCAGGAGTGACCTTGGAGGGATCGA
                      ____________________________________________________________
consensus             AGCTGTCTAAGCCCAGATCCTTCTGGAAATGGACATCAGGAGTGACCTTGGAGGGATCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018C23+           CTTTGGGGAAGGTCTTGACAACGTCGAGGACTCTGCCGGCGACTTCCTCCTTGCTGAGGT
JMFN018E17+           CTTTGGGGAAGGTCTTGACAACGTCGAGGACTCTGCCGGCGACTTCCTCCTTGCTGAGGT
JMFN034C12+           CTTTGGGGAAGGTCTTGACAACGTCGAGGACTCTGCCGGCGACTTCCTCCTTGCTGAGGT
JMFN016E21+           CTTTGGGGAAGGTCTTGACAACGTCGAGGACTCTGCCGGCGACTTCCTCCTTGCTGAGGT
                      ____________________________________________________________
consensus             CTTTGGGGAAGGTCTTGACAACGTCGAGGACTCTGCCGGCGACTTCCTCCTTGCTGAGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018C23+           GGTCGTCGTGCGACGACATCCATCGAGCGGAGCTCAGTCGCGATCCGTTGGCTGATATGG
JMFN018E17+           GGTCGTCGTGCGACGACATCCATCGAGCGGAGCTCAGTCGCGATCCGTTGGCTGATATGG
JMFN034C12+           GGTCGTCGTGCGACGACATCCATCGAGCGGAGCTCAGTCGCGATCCGTTGGCTGATATGG
JMFN016E21+           GGTCGTCGTGCGACGACATCCATCGAGCGGAGCTCAGTCGCGATCCATTGGCTGATATGG
                      ____________________________________________________________
consensus             GGTCGTCGTGCGACGACATCCATCGAGCGGAGCTCAGTCGCGATCCGTTGGCTGATATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018C23+           CTTGAGTCGCCGGGACTCGCACGTGACGGAGTATAGCTGATCTCAACGCCGACGCCATTC
JMFN018E17+           CTTGAGTCGCCGGGACTCGCACGTGACGGAGTATAGCTGATCTCAACGCCGACGCCATTC
JMFN034C12+           CTTGAGTCGCCGGGACTCGCACGTGACGGAGTATAGCTGATCTCAACGCCGACGCCATTC
JMFN016E21+           CTTGAGTCGCCGGGACTCGCACGTGACGGAGTATAGCTGATCTCAACGCCGACGCCATTC
                      ____________________________________________________________
consensus             CTTGAGTCGCCGGGACTCGCACGTGACGGAGTATAGCTGATCTCAACGCCGACGCCATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018C23+           CTATTGTCTCAGGTGGGCTATGTGTCTCCTTTGTCAGT                      
JMFN018E17+           CTATTGTCTCAGGTGGGCTATGTGTCTCCTTTGTCAGTTAGTTGGGGGGAT         
JMFN034C12+           CTATTGTCTCAGGTGGGCTATGTGTCTCCTTTGTCAGTTAGTTGGGGGGATGCGACTGAA
JMFN016E21+           CTATTGTCTCAGGTGGGCTATGTGTCTCCTTTGTCAGTTAGTTGGGGGGATGCGACTGAA
                      ____________________________________________________________
consensus             CTATTGTCTCAGGTGGGCTATGTGTCTCCTTTGTCAGTTAGTTGGGGGGATGCGACTGAA