Contig 003326:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN014J17Sequence560003326 (2)gb|KJB68523.1|5e-23hypothetical protein B456_010G248300 [Gossypium raimondii]
JMSF002D03Sequence363010546 (2)782003326 (2)ref|XP_006350251.1|8e-89PREDICTED: probable acetyl-CoA acetyltransferase, cytosolic 2-like [Solanum tub

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF002D03+ GTAGAGGGAAGACACCTAGTATTGTTGACAAAGATGATGGTTTAA
                      ____________________________________________________________
consensus GTAGAGGGAAGACACCTAGTATTGTTGACAAAGATGATGGTTTAA
 
. : . : . : . : . : . :
rJMSF002D03+ GACAGTTTGATGCCGCTAAATTGAGAAAGCTTAGACCTAGTTTTAAAGAAGGAGGTACTG
                      ____________________________________________________________
consensus GACAGTTTGATGCCGCTAAATTGAGAAAGCTTAGACCTAGTTTTAAAGAAGGAGGTACTG
 
. : . : . : . : . : . :
rJMSF002D03+ TCACTGCCGGCAATGCTTCTATCATAAGTGATGGAGCTGCTGCACTGGTGCTGGTAAGTG
                      ____________________________________________________________
consensus TCACTGCCGGCAATGCTTCTATCATAAGTGATGGAGCTGCTGCACTGGTGCTGGTAAGTG
 
. : . : . : . : . : . :
rJMSF002D03+ GGGAAACGGCGCTTAAACTTGGGTTGCGAGTAATTGCGAAGATCAGAGGATATGCAGATG
                      ____________________________________________________________
consensus GGGAAACGGCGCTTAAACTTGGGTTGCGAGTAATTGCGAAGATCAGAGGATATGCAGATG
 
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rJMSF002D03+ CTGCTCAGGCACCCGAGTTATTTCCAACTGCTCCGGCACTTGCGATACCAAAAGCAATTA
                      ____________________________________________________________
consensus CTGCTCAGGCACCCGAGTTATTTCCAACTGCTCCGGCACTTGCGATACCAAAAGCAATTA
 
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rJMSF002D03+ AAAACTCTGGTTTGGAGACTTCTGATGTAGATTATTACGAAATAAATGAGGCTTTTTCTG
JMFN014J17- G
                      ____________________________________________________________
consensus AAAACTCTGGTTTGGAGACTTCTGATGTAGATTATTACGAAATAAATGAGGCTTTTTCTG
 
. : . : . : . : . : . :
rJMSF002D03+ TTGTCGCCCTTGCCAACCGAAGACTGCTCAATCTTGATCCTGGAAAACTGAATGTACATG
JMFN014J17- TTGTCGCCCTTGCCAACCGAAGACTGCTCAATCTTGATCCTGGAAAACTGAATGTACATG
                      ____________________________________________________________
consensus TTGTCGCCCTTGCCAACCGAAGACTGCTCAATCTTGATCCTGGAAAACTGAATGTACATG
 
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rJMSF002D03+ GAGGAGCTGTGTCTTTGGGACATCCCCTGGGCTGCAGTGGGGCTAGGATCGTGGTAACGT
JMFN014J17- GAGGAGCTGTGTCTTTGGGACATCCCCTGGGCTGCAGTGGGGCTAGGATCGTGGTAACGT
                      ____________________________________________________________
consensus GAGGAGCTGTGTCTTTGGGACATCCCCTGGGCTGCAGTGGGGCTAGGATCGTGGTAACGT
 
. : . : . : . : . : . :
rJMSF002D03+ TGTTAGGGGTGCTGAGGGCAAAGAATGGAAAAGTTGGGGCTGCCGGAGTTTGCAATGGAG
JMFN014J17- TGTTAGGGGTGCTGAGGGCAAAGAATGGAAAAGTTGGGGCTGCCGGAGTTTGCAATGGAG
                      ____________________________________________________________
consensus TGTTAGGGGTGCTGAGGGCAAAGAATGGAAAAGTTGGGGCTGCCGGAGTTTGCAATGGAG
 
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rJMSF002D03+ GAGGAGGAGCATCAGCGCTTGTTGTAGAGCTCATGCCTGAAGCGAAGATGGTACGACCAA
JMFN014J17- GAGGAGGAGCATCAGCGCTTGTTGTAGAGCTCATGCCTGAAGCGAAGATGGTACGACCAA
                      ____________________________________________________________
consensus GAGGAGGAGCATCAGCGCTTGTTGTAGAGCTCATGCCTGAAGCGAAGATGGTACGACCAA
 
. : . : . : . : . : . :
rJMSF002D03+ AGCTGTAAAATCTGGCACTCTGGTTGTTGCTGCGATCATTTGCTCGAGATACATGTTTAT
JMFN014J17- AGCTGTAAAATCTGGCACTCTGGTTGTTGCTGCGATCATTTGCTCGAGATACATGTTTAT
                      ____________________________________________________________
consensus AGCTGTAAAATCTGGCACTCTGGTTGTTGCTGCGATCATTTGCTCGAGATACATGTTTAT
 
. : . : . : . : . : . :
rJMSF002D03+ GATACGTTTCTTGGTAGAACTTACAGAAGACGGGGAAATAATGTAGCTTGAAGGGTTCAA
JMFN014J17- GATACGTTTCTTGGTAGAACTTACAGAAGACGGGGAAATAATGTAGCTTGAAGGGTTCAA
                      ____________________________________________________________
consensus GATACGTTTCTTGGTAGAACTTACAGAAGACGGGGAAATAATGTAGCTTGAAGGGTTCAA
 
. : . : . : . : . : . :
rJMSF002D03+ ACAAGGAAGGATTCAGCTGTTAGGATTGTTGTTATTATTTAGCTTTTGTTAGCGTTGCTG
JMFN014J17- ACAAGGAAGGATTCAGCTGTTAGGATTGTTGTTATTATTTAGCTTTTGTTAGCGTTGCTG
                      ____________________________________________________________
consensus ACAAGGAAGGATTCAGCTGTTAGGATTGTTGTTATTATTTAGCTTTTGTTAGCGTTGCTG
 
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rJMSF002D03+ AATTCTGTATT
JMFN014J17- AATTCTGTATTTAAATAGCAATTGTTGCAAATAAAGAGAATAAATAGGCTTGATATTGGC
                      ____________________________________________________________
consensus AATTCTGTATTTAAATAGCAATTGTTGCAAATAAAGAGAATAAATAGGCTTGATATTGGC
 
. : . : . : . : . : . :
JMFN014J17- AATTAGAAGATTTGGGAGAAGGGGAAACTCATAAAAATTCCTCATGTGCTTTTTTTGTTT
                      ____________________________________________________________
consensus AATTAGAAGATTTGGGAGAAGGGGAAACTCATAAAAATTCCTCATGTGCTTTTTTTGTTT