Contig 003315:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009M02Sequence627003315 (2)ref|XP_009800543.1|2e-63PREDICTED: LOW QUALITY PROTEIN: 17.4 kDa class III heat shock protein [Nicotian
JMFN039C09Sequence496003315 (2)ref|XP_002268705.1|1e-15PREDICTED: 17.4 kDa class III heat shock protein [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN009M02+ GTTTGCATATGGGAGCATGGAACTCAGAAA
                      ____________________________________________________________
consensus GTTTGCATATGGGAGCATGGAACTCAGAAA
 
. : . : . : . : . : . :
JMFN009M02+ CTACTACTACATCATAATCCGATTAAACAAGTAAACTAGGAATTGATGCAAACAGCTTAG
                      ____________________________________________________________
consensus CTACTACTACATCATAATCCGATTAAACAAGTAAACTAGGAATTGATGCAAACAGCTTAG
 
. : . : . : . : . : . :
JMFN039C09+ ATGGGCACCTCAATCGTCTTGTAC
JMFN009M02+ AATTGGCGGGCGTGTTCTCGATCGATCGGTCAGGAGATGGGCACCTCAATCGTCTTGGAC
                      ____________________________________________________________
consensus AATTGGCGGGCGTGTTCTCGATCGATCGGTCAGGAGATGGGCACCTCAATCGTCTTGTAC
 
. : . : . : . : . : . :
JMFN039C09+ TTGGGCGGCGGAGGGTGCTTCTCCACCACCTCAGTGAGCTCCCCGTTCTCGCACTCGTCG
JMFN009M02+ TTGGGCGGCGGAGGGTGCTTCTCCACCACCACAGTGAGCACCCCGTTCTCGCACTTGGCG
                      ____________________________________________________________
consensus TTGGGCGGCGGAGGGTGCTTCTCCACCACCTCAGTGAGCTCCCCGTTCTCGCACTTGTCG
 
. : . : . : . : . : . :
JMFN039C09+ GTAATGGCGGAGACGTCGCAGTTTTCCGTCAACTCGAATTTCCTCGCCACTTTGTGCGGG
JMFN009M02+ GTAATGGCGGAGACGTTGCAGTTTTCCGGCAACCTGAATTTCCTCGCCACTTTCTGC-GG
                      ____________________________________________________________
consensus GTAATGGCGGAGACGTTGCAGTTTTCCGTCAACTTGAATTTCCTCGCCACTTTGTGCGGG
 
. : . : . : . : . : . :
JMFN039C09+ CGCCGCTTTCCTGTCCAACTTCAAATACTAGCACTATTCTTCCTCCCGGTTCCTGTTCCC
JMFN009M02+ CGCCGCCTTCCTCTCCAACCTCAAATACTTGCACTCTTCTTCCTCCCGCTTCCTCTTCCC
                      ____________________________________________________________
consensus CGCCGCTTTCCTGTCCAACTTCAAATACTTGCACTCTTCTTCCTCCCGGTTCCTGTTCCC
 
. : . : . : . : . : . :
JMFN039C09+ GTTGGTAATGATCACCAGTGTCCTGTTATCCTCCACGTCCGCTTGAATGTCGTGATTTGG
JMFN009M02+ GTTGCTTTTGATCACCAGCGTCCTCTCATCCTCCACGCCCACCTGAATGTCG-GATTTGG
                      ____________________________________________________________
consensus GTTGGTTTTGATCACCAGTGTCCTGTTATCCTCCACGTCCGCTTGAATGTCGTGATTTGG
 
. : . : . : . : . : . :
JMFN039C09+ ATAACCCGGTATCGTCGAGGTAGAAAACGTATTCGATAGGGGCGCTTGAGGATGTCGCCG
JMFN009M02+ ATAAGCCGGGAACGTCGAGGTAGAAAACGTATTCCTTAGGGGTG-TCGAGGATGTCGGCG
                      ____________________________________________________________
consensus ATAAGCCGGTATCGTCGAGGTAGAAAACGTATTCGTTAGGGGTGCTTGAGGATGTCGGCG
 
. : . : . : . : . : . :
JMFN039C09+ GGAATTCTTCTGACTCCCCGGCTCTCCCCGCCGTCCGGTGCCCGGTACTCCGACGACACC
JMFN009M02+ GGAATGCTACCGACTCCCCGGCTCTCCCCGCCGTCCGGTGCCCGGTACTCCGACGACACC
                      ____________________________________________________________
consensus GGAATTCTTCTGACTCCCCGGCTCTCCCCGCCGTCCGGTGCCCGGTACTCCGACGACACC
 
. : . : . : . : . : . :
JMFN039C09+ ATT
JMFN009M02+ ATTCTCTCTAGCACTTCCGGGATGTTGAGGAGCTGGGCCATCGCGTCCACCACTGCGCTC
                      ____________________________________________________________
consensus ATTCTCTCTAGCACTTCCGGGATGTTGAGGAGCTGGGCCATCGCGTCCACCACTGCGCTC
 
. : . : . : . : . : . :
JMFN009M02+ ATTTCCGACGCCCGTACGTTGTTTCACAAATTTATTTTGCCCTTGATTGAATGGAAGAGA
                      ____________________________________________________________
consensus ATTTCCGACGCCCGTACGTTGTTTCACAAATTTATTTTGCCCTTGATTGAATGGAAGAGA