Contig 003299:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051C19Sequence589003299 (2)emb|CDP13151.1|2e-16unnamed protein product [Coffea canephora]
JMSF035L09Sequence657003299 (2)emb|CDP13151.1|2e-37unnamed protein product [Coffea canephora]703019376ref|XP_010659716.1|7e-14PREDICTED: protein NLP6-like [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF035L09+ TCTGATTCTCCAAATGTAATCAGTCAAGC
                      ____________________________________________________________
consensus TCTGATTCTCCAAATGTAATCAGTCAAGC
 
. : . : . : . : . : . :
JMSF035L09+ AATAACTCCCATCCCATACAGTAACAAATTCCAGAACCCCAATACACCTCTCCCCAGTAG
                      ____________________________________________________________
consensus AATAACTCCCATCCCATACAGTAACAAATTCCAGAACCCCAATACACCTCTCCCCAGTAG
 
. : . : . : . : . : . :
JMSF035L09+ CTTCAAAAACAGGCAAAGCCAAGGATCCCCCAATCCCACAGCCTAAAGCACTCTCCCTAA
                      ____________________________________________________________
consensus CTTCAAAAACAGGCAAAGCCAAGGATCCCCCAATCCCACAGCCTAAAGCACTCTCCCTAA
 
. : . : . : . : . : . :
JMSF035L09+ GTGGGTAATCTTCCTTGTCATAAAACCTCACATCTGGACAAAATTCATCAAACCCATTTC
JMFF051C19+ TCCTTGTCATAAAACCTCACATCTGGACAAAATTCATCAAACCCATTTC
                      ____________________________________________________________
consensus GTGGGTAATCTTCCTTGTCATAAAACCTCACATCTGGACAAAATTCATCAAACCCATTTC
 
. : . : . : . : . : . :
JMSF035L09+ TAAATACCCGACCCGGAGGCCCAAGATTCCCTTCTAGCTCCTCACCAGCAAAATACTCAT
JMFF051C19+ TAAATACCCGACCCGGAGGCCCAAGATTCCCTTCTAGCTCCTCACCAGCAAAATACTCAT
                      ____________________________________________________________
consensus TAAATACCCGACCCGGAGGCCCAAGATTCCCTTCTAGCTCCTCACCAGCAAAATACTCAT
 
. : . : . : . : . : . :
JMSF035L09+ ACCCTACACACAACTTTCTATAAGAACAGAGACCTTTGCGCAAAACAGTGAGACCAAAGG
JMFF051C19+ ACCCTACACACAACTTTCTATAAGAACAGAGACCTTTGCGCAAAACAGTGAGACCAAAGG
                      ____________________________________________________________
consensus ACCCTACACACAACTTTCTATAAGAACAGAGACCTTTGCGCAAAACAGTGAGACCAAAGG
 
. : . : . : . : . : . :
JMSF035L09+ GTTGGTCTGAAGTGGTAAGATGGCATTGATCTTTGATGATCTTGGGTGCCCAGAACTGAA
JMFF051C19+ GTTGGTCTGAAGTGGTAAGATGGCATTGATCTTTGATGATCTTGGGTGCCCAGAACTGAA
                      ____________________________________________________________
consensus GTTGGTCTGAAGTGGTAAGATGGCATTGATCTTTGATGATCTTGGGTGCCCAGAACTGAA
 
. : . : . : . : . : . :
JMSF035L09+ CTAAAGTTGGAAAGTAAGACAAGTCTAAGAGCTGAAGTGCAGATTTGATCTTTTCTTTAA
JMFF051C19+ CTAAAGTTGGAAAGTAAGACAAGTCTAAGAGCTGAAGTGCAGATTTGATCTTTTCTTTAA
                      ____________________________________________________________
consensus CTAAAGTTGGAAAGTAAGACAAGTCTAAGAGCTGAAGTGCAGATTTGATCTTTTCTTTAA
 
. : . : . : . : . : . :
JMSF035L09+ GGGTTTCAGGCTTTTGATGAGTCCAGAAGAGCTGCAGGTGAGCACTGGAGGGCCGTTTGT
JMFF051C19+ GGGTTTCAGGCTTTTGATGAGTCCAGAAGAGCTGCAGGTGAGCACTGGAGGGCCGTTTGT
                      ____________________________________________________________
consensus GGGTTTCAGGCTTTTGATGAGTCCAGAAGAGCTGCAGGTGAGCACTGGAGGGCCGTTTGT
 
. : . : . : . : . : . :
JMSF035L09+ ATGAATAGGAGACTTTTGGTTCGGTGGGCAAGAAATTGAGGAAGTCGGGGATGGAGAGGC
JMFF051C19+ ATGAATAGGAGACTTTTGGTTCGGTGGGCAAGAAATTGAGGAAGTCGGGGATGGAGAGGC
                      ____________________________________________________________
consensus ATGAATAGGAGACTTTTGGTTCGGTGGGCAAGAAATTGAGGAAGTCGGGGATGGAGAGGC
 
. : . : . : . : . : . :
JMSF035L09+ GGCTTTGAGCATCAACTGATGCCATTCTTTGGGTGATTGAGAAACAGACTAGGGTGTTCA
JMFF051C19+ GGCTTTGAGCATCAACTGATGCCATTCTTTGGGTGATTGAGAAACAGACTAGGGTGTTCA
                      ____________________________________________________________
consensus GGCTTTGAGCATCAACTGATGCCATTCTTTGGGTGATTGAGAAACAGACTAGGGTGTTCA
 
. : . : . : . : . : . :
JMSF035L09+ GAAAGTCCGAATTTGTGTATATTTGTGC
JMFF051C19+ GAAAGTCCGAATTTGTGTATATTTGTGCATGGGTAGTTGGCTACTGGGTAGGGAAGAAGG
                      ____________________________________________________________
consensus GAAAGTCCGAATTTGTGTATATTTGTGCATGGGTAGTTGGCTACTGGGTAGGGAAGAAGG
 
. : . : . : . : . : . :
JMFF051C19+ AGAGTTGAGTGTCAGAGCATTGACGGACAGAGTCAGAGAACAGCCTTTCCTGTTTCCTAT
                      ____________________________________________________________
consensus AGAGTTGAGTGTCAGAGCATTGACGGACAGAGTCAGAGAACAGCCTTTCCTGTTTCCTAT