Contig 003288:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF048J24Sequence378003288 (3)619021335
JMSF021C19Sequence711003288 (3)ref|XP_004237711.1|1e-13PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum lycopersicum]723020374
JMSF048J13Sequence698003288 (3)ref|XP_010097311.1|4e-12F-box protein [Morus notabilis] gb|EXB67543.1| F-box protein [Morus notabilis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF021C19+ CCG
                      ____________________________________________________________
consensus CCG
 
. : . : . : . : . : . :
JMSF021C19+ GGGTATGCATAAAGATACCAATAATACTTTCCTTTCAAGTAAATATCATAATCAGGCCTT
                      ____________________________________________________________
consensus GGGTATGCATAAAGATACCAATAATACTTTCCTTTCAAGTAAATATCATAATCAGGCCTT
 
. : . : . : . : . : . :
JMSF021C19+ GACCACAAAGGATCGAAGTGAGGATATGGATTAATTTCTCTCCAACCCCATAAATTACCA
JMSF048J13+ TCCAAACCCACAAATTACCA
                      ____________________________________________________________
consensus GACCACAAAGGATCGAAGTGAGGATATGGATTAATTTCTCTCCAACCCCATAAATTACCA
 
. : . : . : . : . : . :
JMSF021C19+ ACCTGGCTACAAACCATTACCTTGTATTCACATCCATCT---GCACCCCAAACAATGACA
JMSF048J13+ ACCTGGCTGCAAACCATTACCTNGTATACACATCCCTCTAACGAACTCCAAACAATGACA
                      ____________________________________________________________
consensus ACCTGGCTGCAAACCATTACCTTGTATTCACATCCCTCTAACGCACTCCAAACAATGACA
 
. : . : . : . : . : . :
JMSF021C19+ ACCTTCCCTGTCATGTTGTTACAAAACCCAAATCCAATCATTTCTTCCAACCGATCTAGA
JMSF048J13+ ACCTTCCCGGCCATGTTGTTACAAAACCCAAATCCAATCACTTCTTTCAACCGATCTAGA
                      ____________________________________________________________
consensus ACCTTCCCTGTCATGTTGTTACAAAACCCAAATCCAATCATTTCTTTCAACCGATCTAGA
 
. : . : . : . : . : . :
JMSF021C19+ GGAAAATTGGGAGGTGGGGAGATAGGTGGTAACGCCTTAATTTCACGGGTGGATGGGTTC
JMSF048J13+ GGAATATTGTGAGGTGGGGAGATAGGTGGTAATGCCTTAATTTCCCGGGTGGATGGGTTC
                      ____________________________________________________________
consensus GGAATATTGTGAGGTGGGGAGATAGGTGGTAATGCCTTAATTTCCCGGGTGGATGGGTTC
 
. : . : . : . : . : . :
JMSF021C19+ CATAGCAAGATATTCATAGTTCCATCAGTCCTAAGGGTAATTAGGCATAATATACCATCA
JMSF048J13+ CATATCAAGATATCCCTAGTTCCATCAATCCTACCGGCAATTAGGCATAATATACCATCA
                      ____________________________________________________________
consensus CATATCAAGATATTCCTAGTTCCATCAGTCCTACGGGTAATTAGGCATAATATACCATCA
 
. : . : . : . : . : . :
JMSF021C19+ ATACACTTTACCTTCCTTATCCATGAACTTGGCAGGGCTAGGTCTACGCATCCAATCTCA
JMSF048J13+ ATACACTTTACATTCACTATACATGAACTTGGCAGGGCTAGGTTTACACATCCAATTTCA
                      ____________________________________________________________
consensus ATACACTTTACCTTCCTTATCCATGAACTTGGCAGGGCTAGGTTTACGCATCCAATTTCA
 
. : . : . : . : . : . :
JMSF021C19+ TCAGAATCCAATTCTTTGTAAACTAAACCAAATACTTCCTCACGCCAGGGCGGAAATTCT
JMSF048J13+ TCAGAATCCAATTCTTTGTAAACTAATCCAAATACTTCCTCACGCCAGGGCGGATATTCC
                      ____________________________________________________________
consensus TCAGAATCCAATTCTTTGTAAACTAATCCAAATACTTCCTCACGCCAGGGCGGATATTCT
 
. : . : . : . : . : . :
JMSF021C19+ CTAAGCCCAATCTCACGCTGGAAAATGACATAGTCTCTACTCACCCGACTAATTTCATAG
JMSF048J13+ CTGAGCCCAATCTCACGCTGGAAAATGACATAATCTCTACTCACCCGACTAATTTCATAG
                      ____________________________________________________________
consensus CTGAGCCCAATCTCACGCTGGAAAATGACATAGTCTCTACTCACCCGACTAATTTCATAG
 
. : . : . : . : . : . :
JMSF021C19+ TGCTTGTGTTGGAAATGATTATCACTTTTTATTAAAAAATAGAAAAATTTACACACAGAC
JMSF048J13+ TGCTTGTGTTGGAAATGATTATCACTTTTTATTAAAATATAGAAGAATTTACACACAGAC
                      ____________________________________________________________
consensus TGCTTGTGTTGGAAATGATTATCACTTTTTATTAAAATATAGAAGAATTTACACACAGAC
 
. : . : . : . : . : . :
JMSF021C19+ TTAAATCGCATAAGAGACTTTACCGGCAATCTAGCCAAAATCTCGATCAGCAGCTCCCTT
JMSF048J13+ TTAAATCGCATAAGAGACTTTACCGACAATCTCGCCAAAATCTCGATCAGGAGCTCCCTT
JMFF048J24+ AATCTCGCCAAAATCTCGATCAGGAGCTCCGTT
                      ____________________________________________________________
consensus TTAAATCGCATAAGAGACTTTACCGGCAATCTCGCCAAAATCTCGATCAGGAGCTCCCTT
 
. : . : . : . : . : . :
JMSF021C19+ GGTAATTTGCAATTCTCCATTTTCTT
JMSF048J13+ GGAAATTTGCAGTTCTCCATTTTC------TTGAATGAACAGCTTTGTTAGGGTAAAAAG
JMFF048J24+ GGAAATTTGCAGTTCGTCATTTTCTTTCGATTGAATGAATAGCTTTGTTAGGGTAAAAAG
                      ____________________________________________________________
consensus GGAAATTTGCAGTTCTCCATTTTCTTTCGATTGAATGAATAGCTTTGTTAGGGTAAAAAG
 
. : . : . : . : . : . :
JMSF048J13+ GAAACGGTGGTGATTGCAATCTGGTAACCTGGACTACGTAAATGTGGGCTAGCCTAAGCT
JMFF048J24+ GAAACGGTGGTGATTGCAATCTGGTAACCTGGACTACGTAAATGTGGGCTAGCCTAAGCT
                      ____________________________________________________________
consensus GAAACGGTGGTGATTGCAATCTGGTAACCTGGACTACGTAAATGTGGGCTAGCCTAAGCT
 
. : . : . : . : . : . :
JMSF048J13+ TGTTCTCGGAATAAACCACGACT
JMFF048J24+ TGATCTCGGAATAAACCACGACTAATCGGCTCAAAGAAAAATTGTCTTGAAATTTAACCT
                      ____________________________________________________________
consensus TGTTCTCGGAATAAACCACGACTAATCGGCTCAAAGAAAAATTGTCTTGAAATTTAACCT