Contig 003284:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026L01Sequence609003284 (2)ref|XP_009787180.1|2e-09PREDICTED: uncharacterized protein LOC104235147 isoform X3 [Nicotiana sylvestri799003494 (5)ref|XP_009596457.1|5e-97PREDICTED: uncharacterized protein LOC104092544 isoform X1 [Nicotiana tomentosi
JMFF047O07Sequence513003284 (2)ref|XP_009787180.1|1e-08PREDICTED: uncharacterized protein LOC104235147 isoform X3 [Nicotiana sylvestri433003494 (5)ref|XP_008390745.1|9e-20PREDICTED: uncharacterized protein LOC103452996 isoform X1 [Malus domestica]

Alignment

This contig is upended


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JMFF026L01+                                                              AATCACGCG
                      ____________________________________________________________
consensus                                                                AATCACGCG
 
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JMFF026L01+           TGAGACTGGATTAGCTAGAAGTGGTCTTCGTAAAGCTGGCTGAGAATCTGGTCGGATGAG
                      ____________________________________________________________
consensus             TGAGACTGGATTAGCTAGAAGTGGTCTTCGTAAAGCTGGCTGAGAATCTGGTCGGATGAG
 
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JMFF026L01+           AGAGCTTCTTTCACCTAGAAGTGGTCTTTGTAAAGATGGCTGGGAATCTGGTCGGATGAG
JMFF047O07+                                      TTGTAAAGATGGCTGGGATTCTGGTCGGATGAG
                      ____________________________________________________________
consensus             AGAGCTTCTTTCACCTAGAAGTGGTCTTTGTAAAGATGGCTGGGATTCTGGTCGGATGAG
 
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JMFF026L01+           AGAGCTTTGTTCACCATCTGGTGCAGCAGTCTTTTTCTTGAAGCTTAGAGCTCGAAGAAA
JMFF047O07+           AGAGCTTGTTTCACCATCTGGTGCAGCAGTCTTTTTCTTGAAGCTTAGAGCTCGAAGAAA
                      ____________________________________________________________
consensus             AGAGCTTTTTTCACCATCTGGTGCAGCAGTCTTTTTCTTGAAGCTTAGAGCTCGAAGAAA
 
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JMFF026L01+           GCCTCCCATCAATGAGCCTCCATTTGTAACGGAAGGAGATTGAGGTGAAGACTTTTCACT
JMFF047O07+           GCCTCCCATCAATGAGCCTCCATTTGTAACGGAAGGAGATTGAGGTGAAGACTTTTCACT
                      ____________________________________________________________
consensus             GCCTCCCATCAATGAGCCTCCATTTGTAACGGAAGGAGATTGAGGTGAAGACTTTTCACT
 
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JMFF026L01+           AATGCCACTTCCAAACCCAAGATACCTTGGAGGTATTTTAAGTGACTCATCTCTTGGGGC
JMFF047O07+           AATGCCACTTCCAAACCCAAGATACCTTGGAGGTATTTTAAGTGACTCATCTCTTGGGGC
                      ____________________________________________________________
consensus             AATGCCACTTCCAAACCCAAGATACCTTGGAGGTATTTTAAGTGACTCATCTCTTGGGGC
 
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JMFF026L01+           AAAGGAGAAGGATCGTCATTTGCAGCTGAATTGGAGCTTCTTTCTGCCTCTGAGGATTTG
JMFF047O07+           AAAGGAGAAGGATCGTCATTTGCAGCTGAATTGGAGCTTCTTTCTGCCTCTGAGGATTTG
                      ____________________________________________________________
consensus             AAAGGAGAAGGATCGTCATTTGCAGCTGAATTGGAGCTTCTTTCTGCCTCTGAGGATTTG
 
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JMFF026L01+           GGTGCTTCCATTTTTGTGTAAAATAAAGATTAAAAAGAAAAAACACAAAGAAACAACAAA
JMFF047O07+           GGTGCTTCCATTTTTGTGTAAAATAAAGATTAAAAAGAAAAAACACAAAGAAACAACAAA
                      ____________________________________________________________
consensus             GGTGCTTCCATTTTTGTGTAAAATAAAGATTAAAAAGAAAAAACACAAAGAAACAACAAA
 
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JMFF026L01+           GATGAAAGAAAGATACTTTCGAATTATGCAAGAAAAAGCAGTGGAGAGTGAAATCTGGCT
JMFF047O07+           GATGAAAGAAAGATACTTTCGAATTATGCAAGAAAAAGCAGTGGAGAGTGAAATCTGGCT
                      ____________________________________________________________
consensus             GATGAAAGAAAGATACTTTCGAATTATGCAAGAAAAAGCAGTGGAGAGTGAAATCTGGCT
 
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JMFF026L01+           TTCTTGCTTCGTTTGCTGAGGAAGGTGGTGATAAATCAGAGGGGAATGCCACCTACGTCA
JMFF047O07+           TTCTTGCTTCGTTTGCTGAGGAAGGTGGTGATAAATCAGAGGGGAATGCCACCTACGTCA
                      ____________________________________________________________
consensus             TTCTTGCTTCGTTTGCTGAGGAAGGTGGTGATAAATCAGAGGGGAATGCCACCTACGTCA
 
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JMFF026L01+           TCGCTAATTGCAATGGAGGGAACCCTGAGGACTCTTCATCTTTGACTATGCATTGATTTT
JMFF047O07+           TCGCTAATTGCAATGGAGGGAACCCTGAGGACTCTTCATCTTTGACTATGCATTGATTTT
                      ____________________________________________________________
consensus             TCGCTAATTGCAATGGAGGGAACCCTGAGGACTCTTCATCTTTGACTATGCATTGATTTT