| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF035J19 | Sequence | 552 | 003280 (3) | ref|XP_007160953.1| | 5e-47 | hypothetical protein PHAVU_001G031200g [Phaseolus vulgaris] gb|ESW32947.1| hypot | 671 | 012453 (4) | ref|XP_002285467.2| | 3e-13 | PREDICTED: AP2-like ethylene-responsive transcription factor ANT [Vitis vinifer |
| JMFF046I15 | Sequence | 625 | 003280 (3) | ref|XP_007136788.1| | 2e-41 | hypothetical protein PHAVU_009G074300g [Phaseolus vulgaris] gb|ESW08782.1| hypot | 600 | 012453 (4) | gb|KJB63989.1| | 2e-10 | hypothetical protein B456_010G028100 [Gossypium raimondii] |
| JMFF048J15 | Sequence | 406 | 003280 (3) | ref|XP_006581282.1| | 2e-05 | PREDICTED: AP2-like ethylene-responsive transcription factor ANT-like [Glycine | 276 | 012453 (4) | |||
This contig is upended
. : . : . : . : . : . :
JMFF035J19+ CAGGGCAGTGGTGGTGGTGCCTATCTGTTGTTGTTCAGGTGCTTGTTGTCCA
____________________________________________________________
consensus CAGGGCAGTGGTGGTGGTGCCTATCTGTTGTTGTTCAGGTGCTTGTTGTCCA
. : . : . : . : . : . :
JMFF035J19+ AAGAGTTGAACAGAAGCCCAGTTTTTGAGCTCATCATTTCCTGGCATTTGAGCTATTTGC
____________________________________________________________
consensus AAGAGTTGAACAGAAGCCCAGTTTTTGAGCTCATCATTTCCTGGCATTTGAGCTATTTGC
. : . : . : . : . : . :
JMFF035J19+ AGGTTAGAGTAGTAAGAATGGTGATTTTGTGGGTCTTGATGGAACCCCAACCCCAAACAC
____________________________________________________________
consensus AGGTTAGAGTAGTAAGAATGGTGATTTTGTGGGTCTTGATGGAACCCCAACCCCAAACAC
. : . : . : . : . : . :
JMFF035J19+ CTCTGCCTTGCAGCTTCTTCTTCAACATCCTGCTGGGTATAATATATGCTGTCCAAGCTA
JMFF046I15+ GGTATAATATATGCTGTCCAAGCTA
____________________________________________________________
consensus CTCTGCCTTGCAGCTTCTTCTTCAACATCCTGCTGGGTATAATATATGCTGTCCAAGCTA
. : . : . : . : . : . :
JMFF035J19+ AGAATCCCAGCTTCCCTCTCATGGCTACCATACTCACCATCCCCCATTGTTGCACCTCCC
JMFF046I15+ AGAATCCCAGCTTCCCTCTCATGGCTACCATACTCACCATCCCCCATTGTTGCACCTCCC
____________________________________________________________
consensus AGAATCCCAGCTTCCCTCTCATGGCTACCATACTCACCATCCCCCATTGTTGCACCTCCC
. : . : . : . : . : . :
JMFF035J19+ AGAAAGTCCTCCAGCTTAGGACTAGAATTTGGAACCATACTACGAGTCTGGGATCTTGAG
JMFF046I15+ AGAAAGTCCTCCAGCTTAGGACTAGAATTTGGAACCATACTACGAGTCTGGGATCTTGAG
____________________________________________________________
consensus AGAAAGTCCTCCAGCTTAGGACTAGAATTTGGAACCATACTACGAGTCTGGGATCTTGAG
. : . : . : . : . : . :
JMFF035J19+ AAAGCTTCCATGATGCAAAGAGAGCCATCAGATTTGAGAGGCATAGCAGACAAGGGAGAA
JMFF046I15+ AAAGCTTCCATGATGCAAAGAGAGCCATCAGATTTGAGAGGCATAGCAGACAAGGGAGAA
____________________________________________________________
consensus AAAGCTTCCATGATGCAAAGAGAGCCATCAGATTTGAGAGGCATAGCAGACAAGGGAGAA
. : . : . : . : . : . :
JMFF035J19+ TGAAAGGCACCGATTTCCCCAACAGCATAACAGAGACCAGAAGAGTGGAGGGGAGAAAGA
JMFF048J15+ TTCCCCAACAGCATAACAGAGACCAGAAGAGTGGAGGGGAGAAAGA
JMFF046I15+ TGAAAGGCACCGATTTCCCCAACAGCATAACAGAGACCAGAAGAGTGGAGGGGAGAAAGA
____________________________________________________________
consensus TGAAAGGCACCGATTTCCCCAACAGCATAACAGAGACCAGAAGAGTGGAGGGGAGAAAGA
. : . : . : . : . : . :
JMFF035J19+ GAATGGTAGAAGCTTGTAGGAGCAGAAGTGGCAGCTGTGTAAGCATCCATTTTCATGGCG
JMFF048J15+ GAATGGTAGAAGCTTGTAGGAGCAGAAGTGGCAGCTGTGTAAGCATCCATTTTCATGGCG
JMFF046I15+ GAATGGTAGAAGCTTGTAGGAGCAGAAGTGGCAGCTGTGTAAGCATCCATTTTCATGGCG
____________________________________________________________
consensus GAATGGTAGAAGCTTGTAGGAGCAGAAGTGGCAGCTGTGTAAGCATCCATTTTCATGGCG
. : . : . : . : . : . :
JMFF035J19+ GGTGAGAGGGAGAACCC
JMFF048J15+ GGTGAGAGGGAGAACCCCAACAAGTGATTGTTATTAGCATTATTATTATTATTACCACCG
JMFF046I15+ GGTGAGAGGGAGAACCCCAACAAGTGATTGTTATTAGCACTATTATTATTATTACCACCG
____________________________________________________________
consensus GGTGAGAGGGAGAACCCCAACAAGTGATTGTTATTAGCATTATTATTATTATTACCACCG
. : . : . : . : . : . :
JMFF048J15+ CAGCTGTTATGATCATTCATGGACTTCATTTTCCCCTTTCTAAGTGTTTCCTGTGCCTCA
JMFF046I15+ CAGCTGTTATGATCATTCATGGACTTCATTTTCCCCTTTCTAAGTGTTTCCTGTGCCTCA
____________________________________________________________
consensus CAGCTGTTATGATCATTCATGGACTTCATTTTCCCCTTTCTAAGTGTTTCCTGTGCCTCA
. : . : . : . : . : . :
JMFF048J15+ AGAAACCTCAATCATTCCAACAGGAAAATACATAGAAACTCCATTTTCATCTTCACCTTC
JMFF046I15+ AGAAACCTCAATCATTCCAACAGGAAAATACATAGAAACTCCATTTTCATCTTCACCTTC
____________________________________________________________
consensus AGAAACCTCAATCATTCCAACAGGAAAATACATAGAAACTCCATTTTCATCTTCACCTTC
. : . : . : . : . : . :
JMFF048J15+ AACACAATCATCTAAAAGAAGACAAGAAAATAACAAAAACCCTTCTATTCTATCTATGCA
JMFF046I15+ AACACAATCATCTAAAAGAAGACAAGAAAATAACAAAAACCCTTCTATTCTATCTATGCA
____________________________________________________________
consensus AACACAATCATCTAAAAGAAGACAAGAAAATAACAAAAACCCTTCTATTCTATCTATGCA
. : . : . : . : . : . :
JMFF048J15+ CAGACTCTCTCTCTCTCTCTCTCTCTATCTATAAAAAAAGAAGGACCCTTTGAACTAAAC
JMFF046I15+ CAGACTCTCTCTCTCTCTCTCTCTCTATCTATAAAAAAAGAAGGACCCTTTGAACTAAAC
____________________________________________________________
consensus CAGACTCTCTCTCTCTCTCTCTCTCTATCTATAAAAAAAGAAGGACCCTTTGAACTAAAC